Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017742 Vanilla planifolia HOM05D004640 ORTHO05D005489 0.0e+00 1164.1 623 100.0
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 5.9e-203 711.4 662 62.4
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 1.3e-181 640.6 670 56.0
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 6.8e-175 618.2 663 55.8
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 2.2e-173 613.2 671 55.1
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 4.8e-173 612.1 680 57.2
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 6.3e-173 611.7 672 55.7
PSO541G2962 Papaver somniferum HOM05D004640 ORTHO05D005489 6.3e-173 611.7 684 56.6
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 5.9e-171 605.1 669 55.5
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 1.3e-170 604.0 665 55.3
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 1.3e-170 604.0 665 55.3
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 6.5e-170 601.7 667 55.9
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.1e-169 600.9 672 56.2
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 1.1e-169 600.9 673 53.9
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 1.5e-169 600.5 672 56.8
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 3.2e-169 599.4 665 54.9
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 7.2e-169 598.2 673 54.2
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 9.4e-169 597.8 674 55.0
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 3.6e-168 595.9 669 54.3
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 3.6e-168 595.9 671 54.7
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 4.7e-168 595.5 676 55.6
MBI01_g44452_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 1.4e-167 594.0 676 54.1
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.8e-167 593.6 729 52.1
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 6.8e-167 591.7 674 55.3
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 8.8e-167 591.3 673 54.5
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 4.4e-166 589.0 694 53.9
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 1.3e-165 587.4 640 58.0
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 2.2e-165 586.6 665 56.2
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 8.3e-165 584.7 674 54.0
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 8.3e-165 584.7 666 54.1
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 1.4e-164 583.9 669 53.8
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 2.4e-164 583.2 683 54.5
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 4.1e-164 582.4 696 49.6
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 9.2e-164 581.3 605 58.8
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 7.7e-163 578.2 674 55.3
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 1.7e-162 577.0 669 53.5
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 3.8e-162 575.9 636 56.6
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 5.0e-162 575.5 637 57.0
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 5.0e-162 575.5 681 53.5
Prupe.1G004500 Prunus persica HOM05D004640 ORTHO05D005489 6.6e-162 575.1 643 56.0
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 1.9e-161 573.5 647 55.2
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 3.3e-161 572.8 659 55.1
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 5.6e-161 572.0 613 55.5
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 7.3e-161 571.6 672 53.7
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 9.5e-161 571.2 678 53.8
Sabra01G0163500 Salix brachista HOM05D004640 ORTHO05D005489 2.1e-160 570.1 657 54.8
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 2.8e-160 569.7 673 54.1
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 2.8e-160 569.7 574 59.2
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.4e-159 567.4 681 51.2
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 1.8e-159 567.0 638 53.9
MD08G1235100 Malus domestica HOM05D004640 ORTHO05D005489 2.3e-159 566.6 644 55.4
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 4.0e-159 565.8 685 51.8
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 5.2e-159 565.5 667 54.9
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 1.5e-158 563.9 685 52.8
Zm00001eb218090 Zea mays HOM05D004640 ORTHO05D005489 2.6e-158 563.1 441 73.0
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 4.4e-158 562.4 683 53.0
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.2e-157 560.1 678 51.6
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 4.9e-157 558.9 517 62.9
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 1.1e-156 557.8 648 55.1
MD15G1426300 Malus domestica HOM05D004640 ORTHO05D005489 4.1e-156 555.8 651 55.1
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 5.4e-156 555.4 605 56.9
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 7.0e-156 555.1 662 53.5
Thhalv10023347m.g Eutrema salsugineum HOM05D004640 ORTHO05D005489 1.6e-155 553.9 626 56.5
Carub.0002s0421 Capsella rubella HOM05D004640 ORTHO05D005489 7.8e-155 551.6 613 56.8
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 3.0e-154 549.7 559 60.1
HanXRQChr15g0469061 Helianthus annuus HOM05D004640 ORTHO05D005489 5.0e-154 548.9 616 55.7
AL2G15460 Arabidopsis lyrata HOM05D004640 ORTHO05D005489 7.3e-153 545.0 629 55.5
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 3.6e-152 542.7 518 62.5
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 4.7e-152 542.3 619 54.9
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.4e-151 540.8 646 52.8
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 1.2e-150 537.7 795 47.7
THA.LOC104809619 Tarenaya hassleriana HOM05D004640 ORTHO05D005489 2.6e-150 536.6 622 55.0
Sp2g03520 Schrenkiella parvula HOM05D004640 ORTHO05D005489 7.5e-150 535.0 623 54.9
BcaC06g31828 Brassica carinata HOM05D004640 ORTHO05D005489 9.8e-150 534.6 630 54.6
A01p29810 Brassica napus HOM05D004640 ORTHO05D005489 2.9e-149 533.1 616 54.9
BraA01t03109Z Brassica rapa HOM05D004640 ORTHO05D005489 2.9e-149 533.1 616 54.9
BcaC02g10600 Brassica carinata HOM05D004640 ORTHO05D005489 1.4e-148 530.8 610 55.4
C04p25650 Brassica napus HOM05D004640 ORTHO05D005489 1.4e-148 530.8 610 55.4
C05p50900 Brassica napus HOM05D004640 ORTHO05D005489 1.4e-148 530.8 610 55.4
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 1.2e-147 527.7 580 56.4
AT1G60995 Arabidopsis thaliana HOM05D004640 ORTHO05D005489 1.6e-147 527.3 629 54.1
Sopen04g014430 Solanum pennellii HOM05D004640 ORTHO05D005489 2.0e-147 526.9 638 53.9
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 1.7e-146 523.9 586 57.5
C01p37670 Brassica napus HOM05D004640 ORTHO05D005489 2.3e-146 523.5 613 53.8
BolC1t03731H Brassica oleracea HOM05D004640 ORTHO05D005489 2.3e-146 523.5 613 53.8
BcaB04g20302 Brassica carinata HOM05D004640 ORTHO05D005489 8.6e-146 521.5 619 54.6
Solyc04g026280.2 Solanum lycopersicum HOM05D004640 ORTHO05D005489 2.5e-145 520.0 641 52.1
ATR0763G087 Amborella trichopoda HOM05D004640 ORTHO05D005489 3.6e-144 516.2 624 55.8
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 1.9e-140 503.8 549 56.1
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 1.6e-139 500.7 674 46.7
Oeu032223.3 Olea europaea HOM05D000396 ORTHO05D000116 7.8e-139 498.4 454 63.7
Mapoly0014s0041 Marchantia polymorpha HOM05D004640 ORTHO05D005489 8.6e-138 495.0 644 48.8
unitig_0.g396 Utricularia gibba HOM05D004640 ORTHO05D005489 3.6e-136 489.6 630 51.9
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 2.3e-135 486.9 567 55.4
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 1.3e-133 481.1 496 58.9
Nitab4.5_0001785g0050 Nicotiana tabacum HOM05D004640 ORTHO05D005489 1.7e-133 480.7 732 44.3
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 6.4e-133 478.8 671 45.8
BcaC09g49343 Brassica carinata HOM05D004640 ORTHO05D005489 5.4e-132 475.7 570 53.5
Pp3c3_37820 Physcomitrium patens HOM05D004640 ORTHO05D005489 3.5e-131 473.0 602 48.2
SGA_v2.0_scaffold51G18853 Striga asiatica HOM05D004640 ORTHO05D005489 9.6e-129 464.9 700 46.7
BolC4t24244H Brassica oleracea HOM05D004640 ORTHO05D005489 1.1e-119 434.9 430 57.0
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.0e-118 430.6 581 47.5
Gohir.D04G163900 Gossypium hirsutum HOM05D004640 ORTHO05D005489 6.4e-117 425.6 402 62.2
AagrBONN_evm.TU.Sc2ySwM_344.1404 Anthoceros agrestis HOM05D004640 ORTHO05D005489 5.4e-116 422.5 569 46.6
SMO116G0341 Selaginella moellendorffii HOM05D004640 ORTHO05D005489 1.6e-115 421.0 641 44.8
Peaxi162Scf00577g00411 Petunia axillaris HOM05D004640 ORTHO05D005489 2.3e-114 417.2 670 41.9
Duzib052G0332 Durio zibethinus HOM05D004640 ORTHO05D005489 9.6e-113 411.8 689 44.1
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 6.9e-111 405.6 678 41.6
Oeu046366.1 Olea europaea HOM05D004640 ORTHO05D005489 1.4e-108 397.9 631 45.0
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.5e-105 387.1 567 46.2
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 7.6e-102 375.6 719 38.1
HPP92_017709 Vanilla planifolia HOM05D004640 ORTHO05D005489 4.9e-101 372.9 262 78.6
CBR_g54224 Chara braunii HOM05D004640 ORTHO05D005489 3.7e-96 356.7 543 47.1
Nitab4.5_0004809g0070 Nicotiana tabacum HOM05D004640 ORTHO05D005489 9.3e-92 342.0 564 40.8
Ah.06g188240 Amaranthus hybridus HOM05D004640 ORTHO05D005489 6.7e-90 335.9 509 47.5
Hund07189 Selenicereus undatus HOM05D004640 ORTHO05D005489 1.1e-89 335.1 656 38.0
CAN.G124.21 Capsicum annuum HOM05D004640 ORTHO05D005489 2.1e-83 314.3 301 67.4
CDE12G0675 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 7.7e-78 295.8 465 41.5
Haze_01729 Corylus avellana HOM05D004640 ORTHO05D005489 4.2e-68 263.5 275 64.7
BraSC39t46176Z Brassica rapa HOM05D004640 ORTHO05D005489 1.5e-65 255.0 288 56.2
TAR625G1136 Trochodendron aralioides HOM05D004640 ORTHO05D005489 2.8e-64 250.8 180 81.7
CDE12G0722 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 4.7e-59 233.4 291 52.6
CDE12G0158 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 6.3e-56 223.0 190 78.4
Manes.07G017650 Manihot esculenta HOM05D004640 ORTHO05D005489 6.3e-56 223.0 165 84.2
CDE12G0207 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 1.0e-45 189.1 296 42.2
CDE12G0153 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 2.6e-41 174.5 240 43.3
RcHm_v2.0_Chr7g0230911 Rosa chinensis HOM05D004640 ORTHO05D005489 9.8e-41 172.6 102 90.2
BNapus_Darmor_BZH_scaffold_271p00020 Brassica napus HOM05D004640 ORTHO05D005489 1.5e-36 158.7 137 65.0
MBI01_g00654_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 3.1e-34 151.0 217 43.8
EL10Ac4g09783 Beta vulgaris HOM05D004640 ORTHO05D005489 1.4e-31 142.1 221 52.0
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 3.2e-31 141.0 273 40.7
BNapus_Darmor_BZH_scaffold_271p00030 Brassica napus HOM05D004640 ORTHO05D005489 2.0e-30 138.3 284 34.5
Haze_01727 Corylus avellana HOM05D004640 ORTHO05D005489 1.1e-28 132.5 85 70.6
arahy.Tifrunner.gnm1.ann1.2GJ950 Arachis hypogaea HOM05D004640 ORTHO05D005489 1.6e-22 112.1 89 73.0
Gohir.D04G163933 Gossypium hirsutum HOM05D004640 ORTHO05D005489 1.3e-21 109.0 199 34.7
PRCOL_00005332 Prasinoderma coloniale HOM05D004640 ORTHO05D005489 6.2e-19 100.1 326 27.9
TAR625G0944 Trochodendron aralioides HOM05D004640 ORTHO05D005489 1.3e-16 92.4 125 41.6
Haze_01804 Corylus avellana HOM05D004640 ORTHO05D005489 4.6e-14 84.0 59 64.4
SEGI_36483 Sequoiadendron giganteum HOM05D004640 ORTHO05D005489 1.7e-13 82.0 55 74.5
Haze_01724 Corylus avellana HOM05D004640 ORTHO05D005489 1.5e-12 79.0 115 38.3
arahy.Tifrunner.gnm1.ann1.5KT91U Arachis hypogaea HOM05D004640 ORTHO05D005489 3.4e-09 67.8 62 53.2
Zm00001eb114350 Zea mays HOM05D004640 ORTHO05D005489 4.4e-09 67.4 53 54.7
SalBow8G0731 Salvia bowleyana HOM05D004640 ORTHO05D005489 7.6e-09 66.6 55 60.0
RcHm_v2.0_Chr6g0266101 Rosa chinensis HOM05D004640 ORTHO05D005489 5.4e-07 60.5 32 93.8
SEGI_15466 Sequoiadendron giganteum HOM05D004640 ORTHO05D005489 2.1e-06 58.5 119 27.7
RcHm_v2.0_Chr7g0219231 Rosa chinensis HOM05D003652 ORTHO05D005489 6.0e-06 57.0 36 80.6


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