Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 5.2e-48 194.1 102 100.0
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 1.1e-29 133.3 103 68.9
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 2.7e-28 128.6 104 68.3
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.3e-27 126.3 103 68.0
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 2.9e-27 125.2 104 67.3
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 5.0e-27 124.4 103 64.1
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 5.0e-27 124.4 103 64.1
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 8.6e-27 123.6 104 66.3
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 8.6e-27 123.6 103 64.1
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.5e-26 122.9 102 67.6
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 4.2e-26 121.3 100 67.0
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 5.5e-26 120.9 101 67.3
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 7.2e-26 120.6 102 66.7
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 7.2e-26 120.6 102 66.7
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 9.5e-26 120.2 102 66.7
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 9.5e-26 120.2 103 64.1
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.2e-25 119.8 102 65.7
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.6e-25 119.4 103 65.0
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 2.1e-25 119.0 107 61.7
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 2.8e-25 118.6 104 65.4
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 3.6e-25 118.2 103 62.1
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 3.6e-25 118.2 102 62.7
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 3.6e-25 118.2 103 62.1
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 4.7e-25 117.9 103 63.1
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 4.7e-25 117.9 102 65.7
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 4.7e-25 117.9 102 65.7
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 6.1e-25 117.5 100 64.0
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 6.1e-25 117.5 102 65.7
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 8.0e-25 117.1 102 64.7
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 1.0e-24 116.7 99 60.6
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 2.3e-24 115.5 100 62.0
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 3.0e-24 115.2 100 66.0
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 5.2e-24 114.4 104 61.5
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 6.8e-24 114.0 102 64.7
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 6.8e-24 114.0 100 64.0
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 8.9e-24 113.6 102 62.7
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.2e-23 113.2 102 62.7
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.2e-23 113.2 101 61.4
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 1.2e-23 113.2 100 63.0
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.5e-23 112.8 104 61.5
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 2.0e-23 112.5 99 63.6
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 2.6e-23 112.1 102 62.7
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.4e-23 111.7 105 62.9
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.4e-23 111.7 105 62.9
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 3.4e-23 111.7 101 60.4
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 4.4e-23 111.3 102 58.8
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 4.4e-23 111.3 100 58.0
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 5.7e-23 110.9 95 64.2
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 7.5e-23 110.5 101 59.4
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 7.5e-23 110.5 103 60.2
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 1.3e-22 109.8 101 59.4
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.7e-22 109.4 101 59.4
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 1.7e-22 109.4 101 59.4
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.8e-22 108.6 104 61.5
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 3.7e-22 108.2 103 58.3
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 4.9e-22 107.8 101 58.4
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 4.9e-22 107.8 101 58.4
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 4.9e-22 107.8 101 58.4
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 4.9e-22 107.8 101 58.4
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 6.3e-22 107.5 103 58.3
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 6.3e-22 107.5 101 57.4
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 6.3e-22 107.5 102 58.8
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 8.3e-22 107.1 103 59.2
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.8e-21 105.9 102 57.8
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.8e-21 105.9 101 59.4
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 2.4e-21 105.5 114 54.4
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.1e-21 105.1 103 56.3
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 3.1e-21 105.1 103 59.2
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 5.4e-21 104.4 102 58.8
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 5.4e-21 104.4 102 57.8
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 9.2e-21 103.6 102 56.9
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.2e-20 103.2 119 56.3
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 1.6e-20 102.8 94 59.6
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 1.6e-20 102.8 108 56.5
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 3.5e-20 101.7 103 56.3
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 5.9e-20 100.9 105 54.3
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 5.9e-20 100.9 103 58.3
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.0e-19 100.1 102 54.9
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.3e-19 99.8 64 78.1
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 2.3e-19 99.0 96 58.3
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.3e-19 99.0 105 52.4
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 3.8e-19 98.2 107 52.3
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 3.8e-19 98.2 79 65.8
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 1.5e-18 96.3 65 76.9
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 1.9e-18 95.9 102 55.9
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 3.3e-18 95.1 99 53.5
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 4.3e-18 94.7 105 54.3
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 9.5e-18 93.6 103 54.4
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 9.5e-18 93.6 63 76.2
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 2.8e-17 92.0 64 71.9
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 2.8e-17 92.0 61 75.4
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 3.6e-17 91.7 89 57.3
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 8.0e-17 90.5 87 56.3
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 1.8e-16 89.4 65 72.3
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.8e-16 89.4 67 70.1
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 5.2e-16 87.8 65 70.8
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 5.2e-16 87.8 96 57.3
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 3.4e-15 85.1 64 67.2
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 1.7e-14 82.8 70 64.3
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 2.2e-14 82.4 49 85.7
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 1.4e-13 79.7 53 75.5
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 1.8e-13 79.3 52 76.9
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 5.4e-13 77.8 49 79.6
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 9.2e-13 77.0 53 69.8
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-12 76.3 53 77.4
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 2.7e-12 75.5 69 58.0
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.1e-08 63.5 39 82.1
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 7.5e-07 57.4 104 35.6


User provided reference genes

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