Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 1.2e-75 286.6 156 100.0
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 6.0e-48 194.5 137 75.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 8.7e-47 190.7 131 74.0
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.1e-46 190.3 136 72.1
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.5e-46 189.9 133 72.2
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.9e-46 189.5 155 70.3
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.9e-46 189.5 145 71.7
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.9e-46 189.5 133 72.2
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.5e-46 189.1 131 74.8
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.3e-46 188.3 123 77.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.3e-46 188.3 132 76.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.3e-46 188.3 132 76.5
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 4.3e-46 188.3 139 74.8
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 5.6e-46 188.0 131 74.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.3e-45 186.8 140 72.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.6e-45 186.4 131 72.5
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.6e-45 186.4 136 75.0
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.8e-45 185.7 135 75.6
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.7e-45 185.3 120 80.0
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.7e-45 185.3 120 80.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 3.7e-45 185.3 131 71.0
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 6.2e-45 184.5 131 71.8
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 6.2e-45 184.5 143 68.5
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 6.2e-45 184.5 136 74.3
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 6.2e-45 184.5 136 74.3
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 8.2e-45 184.1 132 74.2
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 8.2e-45 184.1 132 72.7
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.1e-44 183.7 143 68.5
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-44 183.7 143 68.5
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.1e-44 183.7 143 68.5
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.1e-44 183.7 143 68.5
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.1e-44 183.7 131 71.8
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.1e-44 183.7 140 75.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-44 183.7 141 70.2
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.1e-44 183.7 116 80.2
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.4e-44 183.3 123 77.2
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.8e-44 183.0 154 67.5
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.8e-44 183.0 154 67.5
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.8e-44 183.0 118 80.5
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.8e-44 183.0 126 73.0
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 1.8e-44 183.0 127 76.4
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.4e-44 182.6 153 65.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.4e-44 182.6 154 66.2
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.4e-44 182.6 120 79.2
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.4e-44 182.6 131 74.8
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 3.1e-44 182.2 154 64.9
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 4.0e-44 181.8 131 69.5
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 5.3e-44 181.4 132 72.7
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 9.0e-44 180.6 154 65.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.2e-43 180.3 152 65.1
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.2e-43 180.3 131 70.2
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.2e-43 180.3 131 75.6
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.2e-43 180.3 136 71.3
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.5e-43 179.9 155 64.5
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.5e-43 179.9 108 82.4
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.5e-43 179.9 154 63.6
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.5e-43 179.9 133 70.7
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-43 179.5 136 69.9
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-43 179.5 136 69.9
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.6e-43 179.1 131 74.0
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.4e-43 178.7 129 69.0
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.4e-43 178.7 149 65.8
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.4e-43 178.7 136 71.3
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 3.4e-43 178.7 136 71.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 3.4e-43 178.7 140 70.0
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 4.5e-43 178.3 141 70.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 4.5e-43 178.3 131 71.0
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 4.5e-43 178.3 131 71.8
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 5.8e-43 177.9 131 71.8
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 7.6e-43 177.6 157 65.0
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.6e-43 177.6 157 65.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 7.6e-43 177.6 131 76.3
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.0e-42 177.2 148 66.9
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.0e-42 177.2 136 70.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.0e-42 177.2 137 70.8
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.3e-42 176.8 106 81.1
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.3e-42 176.8 131 74.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.7e-42 176.4 136 69.1
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.7e-42 176.4 103 85.4
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.2e-42 176.0 148 66.9
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.2e-42 176.0 154 64.3
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.2e-42 176.0 115 75.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.9e-42 175.6 136 69.9
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 2.9e-42 175.6 150 66.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.8e-42 175.3 153 64.7
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 3.8e-42 175.3 153 63.4
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 6.5e-42 174.5 127 70.9
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 8.4e-42 174.1 156 65.4
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.1e-41 173.7 105 81.0
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.1e-41 173.7 120 71.7
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.4e-41 173.3 159 62.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.4e-41 173.3 136 68.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.4e-41 173.3 126 70.6
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.9e-41 172.9 156 61.5
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.9e-41 172.9 136 69.9
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.9e-41 172.9 140 67.1
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.2e-41 172.2 146 64.4
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 3.2e-41 172.2 140 67.1
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 5.5e-41 171.4 155 62.6
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.1e-41 171.0 133 67.7
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 9.3e-41 170.6 154 62.3
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 9.3e-41 170.6 153 62.1
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 9.3e-41 170.6 126 70.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 9.3e-41 170.6 136 69.1
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 2.1e-40 169.5 156 59.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 2.1e-40 169.5 136 66.9
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.7e-40 169.1 156 60.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 2.7e-40 169.1 118 72.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 4.6e-40 168.3 156 58.3
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.8e-39 166.4 140 63.6
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 6.7e-39 164.5 117 70.9
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.9e-38 162.9 160 59.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 3.1e-36 155.6 142 63.4
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 4.1e-36 155.2 144 58.3
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 9.4e-33 144.1 85 82.4
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 6.1e-32 141.4 142 59.9
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 4.1e-28 128.6 142 50.7
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 4.5e-27 125.2 158 46.8
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.0e-26 124.0 114 57.0
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.3e-26 123.6 122 57.4
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.2e-26 122.9 142 47.9
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 6.5e-26 121.3 157 47.8
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.5e-25 119.4 100 65.0
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 2.8e-21 105.9 147 42.2
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 4.5e-19 98.6 104 48.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.5e-17 92.8 111 50.5
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 6.7e-15 84.7 95 50.5
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.3e-13 80.5 79 54.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 4.0e-07 58.9 98 29.6
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 4.4e-06 55.5 98 29.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 5.7e-06 55.1 98 29.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.7e-06 55.1 98 29.6
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 5.7e-06 55.1 98 28.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 5.7e-06 55.1 98 28.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 7.5e-06 54.7 98 29.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 9.7e-06 54.3 98 27.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 9.7e-06 54.3 98 27.6
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 9.7e-06 54.3 98 27.6
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 9.7e-06 54.3 98 28.6


User provided reference genes

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