Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.6e-216 755.7 371 100.0
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 2.3e-101 373.2 320 60.3
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 9.5e-100 367.9 368 52.4
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 1.2e-99 367.5 307 60.9
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 4.7e-99 365.5 394 51.3
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 3.4e-97 359.4 356 54.5
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 4.4e-97 359.0 306 58.8
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.7e-97 358.6 378 51.3
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 9.8e-97 357.8 305 58.4
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 9.8e-97 357.8 324 58.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.9e-96 356.3 323 57.9
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.9e-96 356.3 323 57.9
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 3.7e-96 355.9 302 59.3
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 6.4e-96 355.1 306 57.8
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 4.1e-95 352.4 308 58.8
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 7.0e-95 351.7 305 57.4
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 1.2e-94 350.9 300 56.0
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 4.6e-94 349.0 302 57.0
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.0e-93 347.8 378 49.5
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 3.0e-93 346.3 312 55.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 3.0e-93 346.3 387 49.6
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.0e-93 346.3 317 56.5
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 3.0e-93 346.3 318 57.9
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 6.6e-93 345.1 294 57.8
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.5e-92 344.0 371 50.7
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 4.3e-92 342.4 308 57.1
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 5.6e-92 342.0 318 56.9
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 2.1e-91 340.1 381 49.9
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.8e-91 339.7 309 56.0
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 4.7e-91 339.0 311 56.3
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 4.7e-91 339.0 300 55.7
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 4.7e-91 339.0 309 55.7
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 4.7e-91 339.0 388 48.5
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 4.7e-91 339.0 305 54.4
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.0e-90 337.8 323 53.6
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.4e-90 337.4 317 55.2
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 2.3e-90 336.7 308 54.5
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.3e-90 336.7 325 52.6
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.3e-90 336.7 375 50.1
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 5.2e-90 335.5 324 54.0
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.2e-90 335.5 337 54.0
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 6.8e-90 335.1 307 54.7
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.8e-90 335.1 347 53.0
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 8.9e-90 334.7 294 58.5
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 2.6e-89 333.2 307 54.4
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 2.6e-89 333.2 307 54.4
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 4.4e-89 332.4 312 54.5
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 4.4e-89 332.4 308 55.8
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 7.5e-89 331.6 300 55.0
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 9.8e-89 331.3 320 52.8
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-88 330.9 292 56.2
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 1.7e-88 330.5 398 46.7
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.9e-88 329.7 346 51.7
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 8.3e-88 328.2 333 49.8
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.1e-87 327.8 307 52.8
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 1.9e-87 327.0 288 56.6
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 7.0e-87 325.1 327 51.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 7.0e-87 325.1 308 52.6
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 9.2e-87 324.7 308 52.9
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-86 324.3 379 48.5
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.2e-86 324.3 317 53.6
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.0e-86 323.6 326 50.3
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 2.0e-86 323.6 308 54.5
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 2.7e-86 323.2 352 48.3
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 2.7e-86 323.2 293 57.0
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 2.7e-86 323.2 309 54.7
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 7.8e-86 321.6 301 54.5
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 3.0e-85 319.7 306 52.9
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 3.9e-85 319.3 372 48.4
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 3.9e-85 319.3 301 53.8
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.9e-85 319.3 386 47.4
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.1e-84 317.8 329 50.8
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.1e-84 317.8 308 53.6
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.5e-84 317.4 304 53.0
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.9e-84 317.0 311 52.7
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 7.3e-84 315.1 304 52.6
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 9.5e-84 314.7 302 53.3
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 2.8e-83 313.2 301 52.5
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 4.7e-83 312.4 274 58.0
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 4.7e-83 312.4 303 54.1
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 6.2e-83 312.0 298 53.4
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 8.1e-83 311.6 317 51.7
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.1e-82 311.2 277 54.9
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 1.4e-82 310.8 319 51.4
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.8e-82 310.5 298 53.4
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 3.1e-82 309.7 312 51.6
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 1.4e-79 300.8 340 45.6
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 3.2e-79 299.7 281 54.4
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.1e-79 299.3 278 55.8
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 9.2e-79 298.1 293 51.9
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 9.5e-76 288.1 307 50.8
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 5.2e-74 282.3 309 48.9
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.2e-73 281.2 331 46.2
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 5.8e-73 278.9 355 44.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 4.1e-71 272.7 310 44.8
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.6e-70 270.8 240 57.1
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 2.5e-68 263.5 315 44.1
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 1.6e-67 260.8 231 56.7
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 5.2e-66 255.8 236 54.7
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.6e-65 253.4 230 54.8
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.1e-55 221.5 183 68.9
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 2.7e-54 216.9 178 63.5
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 7.4e-52 208.8 238 49.6
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.8e-51 206.8 246 47.2
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 1.3e-48 198.0 194 52.6
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.2e-47 193.4 185 49.7
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.0e-45 188.3 247 38.9
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 3.9e-45 186.4 297 36.4
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.4e-42 177.9 333 36.3
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 1.7e-40 171.0 176 52.3
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.8e-40 169.9 231 39.4
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 3.3e-36 156.8 146 55.5
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 2.4e-34 150.6 264 36.4
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.0e-33 147.5 216 36.6
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 2.6e-33 147.1 155 47.7
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-31 141.4 272 32.4
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.4e-31 141.4 178 44.9
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-30 138.3 265 33.2
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.6e-30 136.3 287 31.7
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-27 128.3 241 33.2
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-26 124.8 308 28.6
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 4.5e-25 119.8 146 42.5
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.5e-24 115.9 136 43.4
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.5e-17 93.2 157 31.8
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 7.7e-17 92.4 119 41.2
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 5.3e-10 69.7 120 39.2
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 4.7e-06 56.6 56 44.6
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 8.0e-06 55.8 45 53.3


User provided reference genes

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