Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017402 Vanilla planifolia HOM05D002570 ORTHO05D002689 1.1e-33 146.0 69 100.0
HPP92_018571 Vanilla planifolia HOM05D002570 ORTHO05D002689 1.1e-14 82.8 67 58.2
HPP92_010459 Vanilla planifolia HOM05D063654 ORTHO05D000230 9.6e-14 79.7 49 69.4
HPP92_010322 Vanilla planifolia HOM05D002570 ORTHO05D002689 1.7e-10 68.9 45 68.9
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 5.4e-09 63.9 59 47.5
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 2.1e-08 62.0 59 45.8
Migut.I00642 Erythranthe guttata HOM05D002570 ORTHO05D002689 3.5e-08 61.2 59 45.8
Eucgr.J03139 Eucalyptus grandis HOM05D002570 ORTHO05D002689 4.6e-08 60.8 59 44.1
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 4.6e-08 60.8 67 41.8
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 6.0e-08 60.5 59 45.8
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 6.0e-08 60.5 59 45.8
Lj3g0002113 Lotus japonicus HOM05D002570 ORTHO05D002689 7.9e-08 60.1 64 45.3
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 1.3e-07 59.3 59 42.4
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 1.3e-07 59.3 71 39.4
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 2.3e-07 58.5 57 45.6
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 2.3e-07 58.5 70 40.0
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 2.3e-07 58.5 59 45.8
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 2.3e-07 58.5 68 39.7
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 3.0e-07 58.2 71 42.3
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 3.0e-07 58.2 59 44.1
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 3.0e-07 58.2 59 40.7
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 5.1e-07 57.4 59 40.7
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 5.1e-07 57.4 59 44.1
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 6.7e-07 57.0 57 43.9
HPP92_015808 Vanilla planifolia HOM05D002570 ORTHO05D002689 6.7e-07 57.0 62 43.5
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 8.7e-07 56.6 59 40.7
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 8.7e-07 56.6 59 44.1
Gohir.A05G143000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 8.7e-07 56.6 59 44.1
Gohir.D05G145400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 8.7e-07 56.6 59 44.1
Gorai.009G149300 Gossypium raimondii HOM05D002570 ORTHO05D002689 8.7e-07 56.6 59 44.1
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 8.7e-07 56.6 68 36.8
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 8.7e-07 56.6 57 43.9
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 8.7e-07 56.6 57 43.9
Zm00001eb067680 Zea mays HOM05D002570 ORTHO05D002689 8.7e-07 56.6 70 42.9
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 1.1e-06 56.2 59 42.4
Dinv23257 Davidia involucrata HOM05D002570 ORTHO05D002689 1.1e-06 56.2 59 44.1
SGA_v2.0_scaffold74G24622 Striga asiatica HOM05D002570 ORTHO05D002689 1.5e-06 55.8 62 38.7
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 2.5e-06 55.1 59 42.4
MSTRG.11212 Avicennia marina HOM05D002570 ORTHO05D002689 2.5e-06 55.1 57 40.4
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 2.5e-06 55.1 53 45.3
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 2.5e-06 55.1 53 45.3
Ciclev10026849m.g Citrus clementina HOM05D002570 ORTHO05D002689 2.5e-06 55.1 59 45.8
DCAR_016323 Daucus carota HOM05D002570 ORTHO05D002689 2.5e-06 55.1 59 44.1
Sed0010699 Sechium edule HOM05D002570 ORTHO05D002689 2.5e-06 55.1 59 44.1
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 2.5e-06 55.1 71 40.8
ECA247G0437 Erigeron canadensis HOM05D005398 ORTHO05D000476 3.3e-06 54.7 59 42.4
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 3.3e-06 54.7 61 41.0
Manes.04G097900 Manihot esculenta HOM05D002570 ORTHO05D002689 3.3e-06 54.7 59 44.1
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 4.3e-06 54.3 69 39.1
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 4.3e-06 54.3 69 39.1
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 5.6e-06 53.9 59 42.4
Oeu033446.1 Olea europaea HOM05D002570 ORTHO05D002689 5.6e-06 53.9 54 40.7
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 7.4e-06 53.5 59 40.7
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 7.4e-06 53.5 57 43.9
CsaV3_7G031670 Cucumis sativus L. HOM05D002570 ORTHO05D002689 7.4e-06 53.5 59 42.4
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 7.4e-06 53.5 59 44.1


User provided reference genes

Program Settings