Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 7.5e-86 320.5 161 100.0
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.8e-23 113.2 85 69.4
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.3e-23 111.7 85 68.2
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 1.2e-22 110.5 86 65.1
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 3.4e-22 109.0 88 62.5
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 1.0e-21 107.5 87 62.1
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 1.0e-21 107.5 87 62.1
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.3e-21 107.1 82 65.9
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 2.2e-21 106.3 82 65.9
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 2.2e-21 106.3 82 65.9
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 2.2e-21 106.3 81 65.4
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.2e-21 106.3 84 64.3
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 2.9e-21 105.9 84 65.5
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.9e-21 105.9 87 60.9
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 3.8e-21 105.5 84 65.5
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 3.8e-21 105.5 82 63.4
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 3.8e-21 105.5 87 64.4
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 3.8e-21 105.5 83 65.1
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 5.0e-21 105.1 119 52.1
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 5.0e-21 105.1 83 62.7
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 5.0e-21 105.1 88 65.9
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.0e-21 105.1 83 63.9
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.0e-21 105.1 82 64.6
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 8.5e-21 104.4 83 66.3
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.5e-21 104.4 83 63.9
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 8.5e-21 104.4 87 59.8
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 8.5e-21 104.4 87 59.8
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.1e-20 104.0 82 62.2
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.9e-20 103.2 81 65.4
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.9e-20 103.2 83 63.9
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 1.9e-20 103.2 82 63.4
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 1.9e-20 103.2 86 61.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 2.5e-20 102.8 86 64.0
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 3.2e-20 102.4 81 64.2
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 3.2e-20 102.4 83 63.9
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 3.2e-20 102.4 84 61.9
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 3.2e-20 102.4 84 61.9
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 3.2e-20 102.4 84 61.9
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 3.2e-20 102.4 83 62.7
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 3.2e-20 102.4 86 64.0
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 4.2e-20 102.1 83 66.3
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 4.2e-20 102.1 81 65.4
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 5.5e-20 101.7 81 61.7
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 5.5e-20 101.7 95 56.8
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 5.5e-20 101.7 83 65.1
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 5.5e-20 101.7 83 65.1
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 5.5e-20 101.7 86 62.8
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 7.2e-20 101.3 82 62.2
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 7.2e-20 101.3 82 61.0
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 7.2e-20 101.3 84 61.9
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 9.4e-20 100.9 86 61.6
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 9.4e-20 100.9 80 63.8
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 9.4e-20 100.9 89 60.7
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 1.2e-19 100.5 82 62.2
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.2e-19 100.5 86 60.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.6e-19 100.1 81 61.7
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.6e-19 100.1 81 63.0
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 1.6e-19 100.1 83 62.7
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.6e-19 100.1 82 64.6
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 2.1e-19 99.8 85 60.0
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.1e-19 99.8 80 63.8
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 2.1e-19 99.8 94 61.7
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 2.7e-19 99.4 83 61.4
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 2.7e-19 99.4 86 62.8
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 2.7e-19 99.4 87 60.9
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 3.6e-19 99.0 83 59.0
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 3.6e-19 99.0 81 63.0
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.6e-19 99.0 83 61.4
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.6e-19 99.0 83 61.4
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 3.6e-19 99.0 86 61.6
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 3.6e-19 99.0 83 62.7
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 4.7e-19 98.6 83 61.4
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 6.1e-19 98.2 83 61.4
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 6.1e-19 98.2 83 61.4
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 7.9e-19 97.8 83 57.8
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 1.0e-18 97.4 81 60.5
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 1.0e-18 97.4 77 67.5
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 1.0e-18 97.4 83 61.4
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.4e-18 97.1 85 56.5
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 1.4e-18 97.1 85 56.5
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 1.4e-18 97.1 83 63.9
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 1.4e-18 97.1 82 58.5
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.4e-18 97.1 84 63.1
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.8e-18 96.7 82 58.5
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.8e-18 96.7 81 61.7
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 2.3e-18 96.3 79 60.8
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 2.3e-18 96.3 68 72.1
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 2.3e-18 96.3 81 60.5
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 3.9e-18 95.5 82 57.3
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 6.7e-18 94.7 77 63.6
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 8.8e-18 94.4 85 55.3
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.1e-17 94.0 79 60.8
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 3.3e-17 92.4 78 59.0
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 4.4e-17 92.0 84 59.5
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 4.4e-17 92.0 84 57.1
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.3e-16 90.5 85 60.0
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 1.3e-16 90.5 82 57.3
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 6.3e-16 88.2 77 59.7
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 2.4e-15 86.3 69 66.7
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 3.1e-15 85.9 62 71.0
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 6.9e-15 84.7 63 68.3
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 9.1e-15 84.3 72 62.5
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.4e-14 82.4 73 57.5
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 4.5e-14 82.0 60 71.7
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 7.7e-14 81.3 80 53.8
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 5.0e-13 78.6 68 63.2
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 2.5e-12 76.3 62 64.5
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 5.5e-12 75.1 68 55.9
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 3.0e-10 69.3 81 48.1


User provided reference genes

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