Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017178 Vanilla planifolia HOM05D005021 ORTHO05D006824 6.1e-208 727.2 365 100.0
Nn7g38248 Nelumbo nucifera HOM05D005021 ORTHO05D006824 1.4e-156 556.6 364 76.9
Os08g0544500 Oryza sativa ssp. japonica HOM05D005021 ORTHO05D006824 5.4e-156 554.7 345 79.4
Zm00001eb405230 Zea mays HOM05D005021 ORTHO05D006824 5.9e-155 551.2 347 79.3
Aqoxy1G01424 Aquilegia oxysepala HOM05D005021 ORTHO05D006824 2.3e-154 549.3 365 75.1
TAR626G1325 Trochodendron aralioides HOM05D005021 ORTHO05D006824 6.6e-154 547.7 364 73.9
Cpa.g.sc30.159 Carica papaya HOM05D005021 ORTHO05D006824 2.5e-153 545.8 367 74.7
RcHm_v2.0_Chr5g0020301 Rosa chinensis HOM05D005021 ORTHO05D006824 5.6e-153 544.7 366 74.3
Duzib248G0067 Durio zibethinus HOM05D005021 ORTHO05D006824 1.6e-152 543.1 367 74.4
FAN21G1452 Fragaria x ananassa HOM05D005021 ORTHO05D006824 3.6e-152 542.0 367 74.1
Potri.012G124400 Populus trichocarpa HOM05D005021 ORTHO05D006824 3.6e-152 542.0 368 74.7
Gohir.D01G132500 Gossypium hirsutum HOM05D005021 ORTHO05D006824 6.1e-152 541.2 367 73.8
Gorai.002G164100 Gossypium raimondii HOM05D005021 ORTHO05D006824 8.0e-152 540.8 367 73.8
COL.COLO4_17653 Corchorus olitorius HOM05D005021 ORTHO05D006824 1.4e-151 540.0 367 74.7
FvH4_3g12410 Fragaria vesca HOM05D005021 ORTHO05D006824 1.4e-151 540.0 367 73.8
Dinv25918 Davidia involucrata HOM05D005021 ORTHO05D006824 2.3e-151 539.3 367 73.3
TWI38G0776 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 2.3e-151 539.3 365 73.2
GSVIVG01012103001 Vitis vinifera HOM05D005021 ORTHO05D006824 3.1e-151 538.9 372 73.1
Sabra12G0094200 Salix brachista HOM05D005021 ORTHO05D006824 4.0e-151 538.5 368 74.5
Gohir.A01G141263 Gossypium hirsutum HOM05D005021 ORTHO05D006824 5.2e-151 538.1 367 73.6
Prupe.4G113100 Prunus persica HOM05D005021 ORTHO05D006824 6.8e-151 537.7 366 73.5
Migut.M01986 Erythranthe guttata HOM05D005021 ORTHO05D006824 8.9e-151 537.3 366 72.7
Phvul.002G097500 Phaseolus vulgaris HOM05D005021 ORTHO05D006824 8.9e-151 537.3 368 72.0
CiPaw.10G064100 Carya illinoinensis HOM05D005021 ORTHO05D006824 1.5e-150 536.6 367 73.8
Thecc.02G008800 Theobroma cacao HOM05D005021 ORTHO05D006824 2.0e-150 536.2 367 73.3
TWI38G0923 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 2.0e-150 536.2 365 73.2
Medtr4g084140 Medicago truncatula HOM05D005021 ORTHO05D006824 5.8e-150 534.6 370 72.7
QL11p016313 Quercus lobata HOM05D005021 ORTHO05D006824 1.3e-149 533.5 366 72.7
CANSAT35G0082 Cannabis sativa HOM05D005021 ORTHO05D006824 1.7e-149 533.1 365 73.2
Ca_18756_v3 Cicer arietinum L. HOM05D005021 ORTHO05D006824 1.7e-149 533.1 368 71.7
ECA238G3003 Erigeron canadensis HOM05D005021 ORTHO05D006824 1.7e-149 533.1 364 72.0
AL4G31120 Arabidopsis lyrata HOM05D005021 ORTHO05D006824 2.2e-149 532.7 365 72.3
FAN25G1951 Fragaria x ananassa HOM05D005021 ORTHO05D006824 2.2e-149 532.7 367 72.8
Psat7g129680 Pisum sativum HOM05D005021 ORTHO05D006824 3.7e-149 531.9 368 72.6
VMungo0251G3115 Vigna mungo HOM05D005021 ORTHO05D006824 4.9e-149 531.6 368 71.7
BolC4t22962H Brassica oleracea HOM05D005021 ORTHO05D006824 6.4e-149 531.2 367 72.8
CSS0004737 Camellia sinensis var. sinensis HOM05D005021 ORTHO05D006824 6.4e-149 531.2 366 71.9
Thhalv10016146m.g Eutrema salsugineum HOM05D005021 ORTHO05D006824 6.4e-149 531.2 366 71.9
Glyma.20G019300 Glycine max HOM05D005021 ORTHO05D006824 6.4e-149 531.2 368 71.7
Lj4g0005220 Lotus japonicus HOM05D005021 ORTHO05D006824 6.4e-149 531.2 369 71.0
Sp4g17340 Schrenkiella parvula HOM05D005021 ORTHO05D006824 6.4e-149 531.2 358 73.5
TPR.G38288 Trifolium pratense HOM05D005021 ORTHO05D006824 6.4e-149 531.2 368 71.5
Lalb_Chr16g0385181 Lupinus albus HOM05D005021 ORTHO05D006824 1.4e-148 530.0 368 71.7
MD10G1231300 Malus domestica HOM05D005021 ORTHO05D006824 1.4e-148 530.0 366 73.0
THA.LOC104798554 Tarenaya hassleriana HOM05D005021 ORTHO05D006824 1.4e-148 530.0 366 72.1
C04p13730 Brassica napus HOM05D005021 ORTHO05D006824 3.2e-148 528.9 367 72.5
HanXRQChr14g0447451 Helianthus annuus HOM05D005021 ORTHO05D006824 3.2e-148 528.9 364 71.2
Cfa000703 Carpinus fangiana HOM05D005021 ORTHO05D006824 4.1e-148 528.5 367 71.9
MD05G1250500 Malus domestica HOM05D005021 ORTHO05D006824 4.1e-148 528.5 366 73.0
Carub.0004s1679 Capsella rubella HOM05D005021 ORTHO05D006824 5.4e-148 528.1 368 72.0
FAN16G3288 Fragaria x ananassa HOM05D005021 ORTHO05D006824 5.4e-148 528.1 381 70.9
Atru.chr10.559 Acer truncatum HOM05D005021 ORTHO05D006824 7.0e-148 527.7 366 72.1
A05p10630 Brassica napus HOM05D005021 ORTHO05D006824 7.0e-148 527.7 367 72.2
Eucgr.D00052 Eucalyptus grandis HOM05D005021 ORTHO05D006824 9.2e-148 527.3 366 72.1
arahy.Tifrunner.gnm1.ann1.79RC6W Arachis hypogaea HOM05D005021 ORTHO05D006824 1.2e-147 526.9 381 69.6
AT2G35110 Arabidopsis thaliana HOM05D005021 ORTHO05D006824 1.6e-147 526.6 365 71.0
BcaB02g09480 Brassica carinata HOM05D005021 ORTHO05D006824 2.0e-147 526.2 367 71.7
BraA05t20004Z Brassica rapa HOM05D005021 ORTHO05D006824 2.0e-147 526.2 367 71.9
MELO3C021737.2 Cucumis melo HOM05D005021 ORTHO05D006824 2.7e-147 525.8 366 72.1
CsaV3_1G046230 Cucumis sativus L. HOM05D005021 ORTHO05D006824 2.7e-147 525.8 366 72.1
BcaB02g09478 Brassica carinata HOM05D005021 ORTHO05D006824 3.5e-147 525.4 367 71.9
ClCG01G009560 Citrullus lanatus HOM05D005021 ORTHO05D006824 7.8e-147 524.2 366 72.4
Hma1.2p1_1005F.1_g246940 Hydrangea macrophylla HOM05D005021 ORTHO05D006824 1.0e-146 523.9 367 71.1
Sopen02g017890 Solanum pennellii HOM05D005021 ORTHO05D006824 1.0e-146 523.9 368 70.1
Potri.015G124500 Populus trichocarpa HOM05D005021 ORTHO05D006824 1.3e-146 523.5 353 74.2
Ciclev10014047m.g Citrus clementina HOM05D005021 ORTHO05D006824 8.6e-146 520.8 366 72.1
Sed0001856 Sechium edule HOM05D005021 ORTHO05D006824 8.6e-146 520.8 366 71.6
Aa31LG9G16120 Aethionema arabicum HOM05D005021 ORTHO05D006824 2.5e-145 519.2 385 68.1
Solyc02g068720.3 Solanum lycopersicum HOM05D005021 ORTHO05D006824 2.5e-145 519.2 368 69.6
Cc09_g06010 Coffea canephora HOM05D005021 ORTHO05D006824 3.3e-145 518.8 367 70.3
RhsimUnG0043400 Rhododendron simsii HOM05D005021 ORTHO05D006824 4.3e-145 518.5 357 72.3
DCAR_003775 Daucus carota HOM05D005021 ORTHO05D006824 9.5e-145 517.3 354 71.5
PSO675G8902 Papaver somniferum HOM05D005021 ORTHO05D006824 3.6e-144 515.4 366 70.5
ATR0752G031 Amborella trichopoda HOM05D005021 ORTHO05D006824 6.2e-144 514.6 363 70.5
Oeu060352.1 Olea europaea HOM05D005021 ORTHO05D006824 6.2e-144 514.6 374 70.1
Oeu060353.1 Olea europaea HOM05D005021 ORTHO05D006824 6.2e-144 514.6 374 70.1
Sc17g0003700 Simmondsia chinensis HOM05D005021 ORTHO05D006824 4.0e-143 511.9 325 76.3
EL10Ac9g20953 Beta vulgaris HOM05D005021 ORTHO05D006824 4.9e-141 505.0 322 77.0
Nitab4.5_0001288g0150 Nicotiana tabacum HOM05D005021 ORTHO05D006824 2.7e-139 499.2 371 68.7
vmacro03526 Vaccinium macrocarpon HOM05D005021 ORTHO05D006824 4.6e-139 498.4 342 70.8
CAN.G149.8 Capsicum annuum HOM05D005021 ORTHO05D006824 3.9e-138 495.4 380 66.1
Nitab4.5_0007745g0040 Nicotiana tabacum HOM05D005021 ORTHO05D006824 1.5e-137 493.4 382 67.0
SalBow8G3018 Salvia bowleyana HOM05D005021 ORTHO05D006824 1.7e-133 479.9 374 66.3
arahy.Tifrunner.gnm1.ann1.59QZXR Arachis hypogaea HOM05D005021 ORTHO05D006824 2.5e-129 466.1 368 64.7
Lj1A1146G59 Lonicera japonica HOM05D005021 ORTHO05D006824 1.2e-128 463.8 364 64.6
PGR004G0612 Punica granatum HOM05D005021 ORTHO05D006824 1.1e-127 460.7 345 67.5
Haze_06074 Corylus avellana HOM05D005021 ORTHO05D006824 2.9e-125 452.6 411 59.9
AUR62041742 Chenopodium quinoa HOM05D005021 ORTHO05D006824 1.6e-123 446.8 329 69.0
AUR62037395 Chenopodium quinoa HOM05D005021 ORTHO05D006824 1.5e-121 440.3 323 68.4
Hund09140 Selenicereus undatus HOM05D005021 ORTHO05D006824 9.6e-121 437.6 320 69.1
Mapoly0087s0075 Marchantia polymorpha HOM05D005021 ORTHO05D006824 1.4e-119 433.7 314 65.0
SMO367G0195 Selaginella moellendorffii HOM05D005021 ORTHO05D006824 1.5e-118 430.3 325 62.8
AagrBONN_evm.TU.Sc2ySwM_344.1422 Anthoceros agrestis HOM05D005021 ORTHO05D006824 1.7e-117 426.8 365 57.0
unitig_748.g8077 Utricularia gibba HOM05D005021 ORTHO05D006824 1.7e-117 426.8 307 68.7
SHI31491 Sapria himalayana HOM05D005021 ORTHO05D006824 4.9e-117 425.2 365 60.5
Manes.16G055900 Manihot esculenta HOM05D005021 ORTHO05D006824 1.1e-111 407.5 232 84.5
Pp3c1_6150 Physcomitrium patens HOM05D005021 ORTHO05D006824 6.9e-111 404.8 304 60.5
Pp3c11_1080 Physcomitrium patens HOM05D005021 ORTHO05D006824 1.2e-110 404.1 354 54.2
Ah.01g015830 Amaranthus hybridus HOM05D005021 ORTHO05D006824 1.8e-98 363.6 313 60.4
CDE05G3601 Ceratophyllum demersum HOM05D005021 ORTHO05D006824 6.2e-96 355.1 350 55.4
SGA_v2.0_scaffold175G39355 Striga asiatica HOM05D005021 ORTHO05D006824 4.5e-94 349.0 351 55.3
SEGI_00319 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 9.7e-65 251.5 146 78.8
CBR_g30692 Chara braunii HOM05D005021 ORTHO05D006824 1.3e-61 241.1 290 40.0
SEGI_41047 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 1.1e-39 168.3 153 55.6
Actinidia33676 Actinidia chinensis HOM05D005021 ORTHO05D006824 1.6e-30 137.9 92 72.8
SGA_v2.0_scaffold88G27325 Striga asiatica HOM05D005021 ORTHO05D006824 1.2e-25 121.7 117 53.8
BcaB07g31175 Brassica carinata HOM05D005021 ORTHO05D006824 2.0e-25 120.9 85 64.7
SEGI_05203 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 2.9e-16 90.5 50 90.0
Psat5g003360 Pisum sativum HOM05D005021 ORTHO05D006824 1.7e-08 64.7 87 42.5


User provided reference genes

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