Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017144 Vanilla planifolia HOM05D000380 ORTHO05D427239 5.5e-49 197.2 93 100.0
HPP92_017158 Vanilla planifolia HOM05D000380 ORTHO05D000561 1.9e-17 92.4 50 86.0
HPP92_010761 Vanilla planifolia HOM05D000380 ORTHO05D000561 3.9e-10 68.2 50 64.0
HPP92_018534 Vanilla planifolia HOM05D000380 ORTHO05D000561 2.8e-08 62.0 49 57.1
Manes.05G087900 Manihot esculenta HOM05D000380 ORTHO05D000561 8.1e-08 60.5 67 43.3
Potri.008G136500 Populus trichocarpa HOM05D000380 ORTHO05D000561 1.8e-07 59.3 50 56.0
ATR0691G024 Amborella trichopoda HOM05D000380 ORTHO05D000561 3.1e-07 58.5 67 44.8
Manes.01G198900 Manihot esculenta HOM05D000380 ORTHO05D000561 4.0e-07 58.2 67 44.8
Potri.010G104500 Populus trichocarpa HOM05D000380 ORTHO05D000561 5.3e-07 57.8 50 56.0
Thecc.02G308700 Theobroma cacao HOM05D000380 ORTHO05D000561 5.3e-07 57.8 50 52.0
Aqoxy3G00962 Aquilegia oxysepala HOM05D000380 ORTHO05D000561 6.9e-07 57.4 67 41.8
Duzib268G1813 Durio zibethinus HOM05D000380 ORTHO05D000561 6.9e-07 57.4 67 43.3
MELO3C012010.2 Cucumis melo HOM05D000380 ORTHO05D000561 9.0e-07 57.0 67 43.3
Glyma.18G136200 Glycine max HOM05D000380 ORTHO05D000561 9.0e-07 57.0 67 40.3
PSO478G3697 Papaver somniferum HOM05D000380 ORTHO05D000561 9.0e-07 57.0 50 54.0
Sabra08G0104300 Salix brachista HOM05D000380 ORTHO05D000561 9.0e-07 57.0 50 56.0
Ah.02g129830 Amaranthus hybridus HOM05D000380 ORTHO05D000561 1.2e-06 56.6 50 52.0
ClCG05G025190 Citrullus lanatus HOM05D000380 ORTHO05D000561 1.2e-06 56.6 67 41.8
Nn4g22831 Nelumbo nucifera HOM05D000380 ORTHO05D000561 1.2e-06 56.6 67 40.3
VMungo0251G1735 Vigna mungo HOM05D000380 ORTHO05D000561 1.2e-06 56.6 67 40.3
MSTRG.13632 Avicennia marina HOM05D000380 ORTHO05D000561 1.5e-06 56.2 50 54.0
Ciclev10030691m.g Citrus clementina HOM05D000380 ORTHO05D000561 2.0e-06 55.8 67 40.3
Migut.E00494 Erythranthe guttata HOM05D000380 ORTHO05D000561 2.0e-06 55.8 50 56.0
Nn8g40273 Nelumbo nucifera HOM05D000380 ORTHO05D000561 2.0e-06 55.8 67 41.8
Phvul.003G053000 Phaseolus vulgaris HOM05D000380 ORTHO05D000561 2.0e-06 55.8 63 41.3
AT1G60140 Arabidopsis thaliana HOM05D000380 ORTHO05D000561 2.6e-06 55.5 67 38.8
AUR62014005 Chenopodium quinoa HOM05D000380 ORTHO05D000561 2.6e-06 55.5 53 47.2
Duzib251G0542 Durio zibethinus HOM05D000380 ORTHO05D000561 2.6e-06 55.5 63 44.4
Manes.17G085400 Manihot esculenta HOM05D000380 ORTHO05D000561 2.6e-06 55.5 50 56.0
PSO017G1638 Papaver somniferum HOM05D000380 ORTHO05D000561 2.6e-06 55.5 50 52.0
Thecc.02G245900 Theobroma cacao HOM05D000380 ORTHO05D000561 2.6e-06 55.5 67 41.8
HPP92_024772 Vanilla planifolia HOM05D000380 ORTHO05D000561 2.6e-06 55.5 50 50.0
Oeu028910.1 Olea europaea HOM05D000380 ORTHO05D000561 3.4e-06 55.1 67 40.3
vmacro16265 Vaccinium macrocarpon HOM05D000380 ORTHO05D000561 3.4e-06 55.1 67 38.8
Aa31LG8G15830 Aethionema arabicum HOM05D000380 ORTHO05D000561 4.4e-06 54.7 67 38.8
Gohir.A03G140900 Gossypium hirsutum HOM05D000380 ORTHO05D000561 4.4e-06 54.7 63 42.9
Gohir.D02G163800 Gossypium hirsutum HOM05D000380 ORTHO05D000561 4.4e-06 54.7 63 42.9
Gorai.005G183800 Gossypium raimondii HOM05D000380 ORTHO05D000561 4.4e-06 54.7 63 42.9
Lj4g0007903 Lotus japonicus HOM05D000380 ORTHO05D000561 4.4e-06 54.7 50 50.0
Sed0013096 Sechium edule HOM05D000380 ORTHO05D000561 4.4e-06 54.7 67 41.8
Atru.chr11.1999 Acer truncatum HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 41.8
AUR62005352 Chenopodium quinoa HOM05D000380 ORTHO05D000561 5.8e-06 54.3 53 45.3
Glyma.08G288600 Glycine max HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 38.8
Oeu001673.1 Olea europaea HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 40.3
Prupe.1G256200 Prunus persica HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 38.8
QL10p012263 Quercus lobata HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 38.8
THA.LOC104807896 Tarenaya hassleriana HOM05D000380 ORTHO05D000561 5.8e-06 54.3 50 50.0
GSVIVG01007789001 Vitis vinifera HOM05D000380 ORTHO05D000561 5.8e-06 54.3 67 38.8
Eucgr.B03950 Eucalyptus grandis HOM05D000380 ORTHO05D000561 7.6e-06 53.9 67 38.8
Nn3g16924 Nelumbo nucifera HOM05D000380 ORTHO05D000561 7.6e-06 53.9 67 40.3
Nn3g19425 Nelumbo nucifera HOM05D000380 ORTHO05D000561 7.6e-06 53.9 53 49.1
THA.LOC104819496 Tarenaya hassleriana HOM05D000380 ORTHO05D000561 7.6e-06 53.9 67 38.8
MSTRG.2119 Avicennia marina HOM05D000380 ORTHO05D000561 9.9e-06 53.5 50 52.0
CSS0023794 Camellia sinensis var. sinensis HOM05D000380 ORTHO05D016659 9.9e-06 53.5 55 47.3
COL.COLO4_19520 Corchorus olitorius HOM05D000380 ORTHO05D000561 9.9e-06 53.5 67 41.8
DCAR_019245 Daucus carota HOM05D000380 ORTHO05D000561 9.9e-06 53.5 67 40.3
MD13G1089600 Malus domestica HOM05D000380 ORTHO05D000561 9.9e-06 53.5 67 38.8
Manes.15G136100 Manihot esculenta HOM05D000380 ORTHO05D000561 9.9e-06 53.5 50 52.0
SalBow2G0911 Salvia bowleyana HOM05D000380 ORTHO05D000561 9.9e-06 53.5 67 40.3
SalBow2G3383 Salvia bowleyana HOM05D000380 ORTHO05D000561 9.9e-06 53.5 67 40.3


User provided reference genes

Program Settings