Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 5.1e-73 277.7 148 100.0
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 6.9e-70 267.3 148 96.6
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 5.1e-20 101.7 142 43.7
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 8.6e-20 100.9 143 44.1
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.1e-19 100.5 140 45.7
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 4.3e-19 98.6 149 38.9
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 7.3e-19 97.8 147 40.8
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 2.1e-18 96.3 147 40.1
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 3.6e-18 95.5 152 41.4
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 8.1e-18 94.4 137 44.5
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 8.1e-18 94.4 147 40.1
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.1e-17 94.0 138 42.8
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.1e-17 94.0 150 40.7
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 1.4e-17 93.6 145 40.7
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 2.3e-17 92.8 150 43.3
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.1e-17 92.4 141 41.1
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.1e-17 92.4 141 41.1
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 3.1e-17 92.4 139 41.7
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.0e-17 92.0 150 40.0
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.0e-17 92.0 150 40.0
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.0e-17 92.0 150 40.0
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.5e-16 90.1 150 39.3
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 2.6e-16 89.4 139 39.6
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 3.4e-16 89.0 139 40.3
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 3.4e-16 89.0 144 40.3
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 4.4e-16 88.6 124 39.5
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 7.5e-16 87.8 141 40.4
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 7.5e-16 87.8 154 37.0
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.3e-15 87.0 144 40.3
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.3e-15 87.0 136 39.0
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.7e-15 86.7 150 42.0
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.9e-15 85.9 147 38.8
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.7e-15 85.5 137 39.4
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 4.9e-15 85.1 141 41.8
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 6.4e-15 84.7 150 41.3
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 6.4e-15 84.7 150 40.7
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 8.3e-15 84.3 127 40.2
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 8.3e-15 84.3 138 42.0
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 8.3e-15 84.3 147 38.1
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 8.3e-15 84.3 123 40.7
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.9e-14 83.2 148 37.2
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 2.4e-14 82.8 128 39.8
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 2.4e-14 82.8 130 39.2
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.2e-14 82.4 135 39.3
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 3.2e-14 82.4 140 39.3
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 3.2e-14 82.4 123 39.8
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 4.1e-14 82.0 160 37.5
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 5.4e-14 81.6 115 39.1
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 5.4e-14 81.6 153 37.9
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 9.2e-14 80.9 107 44.9
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.2e-13 80.5 133 36.1
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 1.2e-13 80.5 142 37.3
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.6e-13 80.1 138 35.5
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.6e-13 80.1 150 39.3
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 2.1e-13 79.7 137 35.8
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.5e-13 79.0 150 34.7
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 3.5e-13 79.0 111 41.4
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 3.5e-13 79.0 150 37.3
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 6.0e-13 78.2 137 35.0
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 6.0e-13 78.2 137 40.1
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 6.0e-13 78.2 133 36.1
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 1.0e-12 77.4 112 42.0
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-12 77.0 116 38.8
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.3e-12 77.0 122 34.4
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.3e-12 76.3 119 36.1
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 3.0e-12 75.9 128 36.7
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.9e-12 75.5 128 36.7
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 3.9e-12 75.5 108 38.0
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 6.6e-12 74.7 149 35.6
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.6e-12 74.7 164 35.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 6.6e-12 74.7 137 36.5
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.5e-11 73.6 136 35.3
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.5e-11 72.8 150 34.0
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 3.3e-11 72.4 142 33.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 4.3e-11 72.0 142 33.1
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 7.3e-11 71.2 117 36.8
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.6e-10 70.1 106 44.3
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.6e-10 70.1 126 33.3
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 2.1e-10 69.7 147 33.3
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 3.6e-10 68.9 100 41.0
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 4.7e-10 68.6 142 34.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.1e-09 67.4 99 37.4
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 2.4e-09 66.2 113 35.4
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 3.1e-09 65.9 150 34.7
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 3.1e-09 65.9 133 33.1
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 4.0e-09 65.5 134 32.8
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 4.0e-09 65.5 150 34.7
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 4.0e-09 65.5 101 36.6
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 5.2e-09 65.1 150 35.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 5.2e-09 65.1 150 35.3
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.5e-08 63.5 99 38.4
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 7.6e-08 61.2 88 43.2
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 9.9e-08 60.8 98 37.8
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.3e-07 60.5 152 34.9
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.3e-07 60.5 120 35.0
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 2.2e-07 59.7 100 33.0
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 2.9e-07 59.3 72 40.3
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 3.8e-07 58.9 115 34.8
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 4.9e-07 58.5 156 32.1
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 4.9e-07 58.5 156 32.1
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 8.4e-07 57.8 148 29.1
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 3.2e-06 55.8 142 34.5
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 5.4e-06 55.1 100 33.0


User provided reference genes

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