Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 7.2e-295 1016.5 529 100.0
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 2.8e-28 131.0 569 27.2
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 8.1e-28 129.4 158 44.3
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 1.8e-27 128.3 562 27.4
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 4.0e-27 127.1 542 28.6
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 5.2e-27 126.7 587 27.9
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 5.2e-27 126.7 606 26.7
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 8.9e-27 125.9 583 27.1
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 1.2e-26 125.6 574 26.5
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 9.9e-26 122.5 554 26.2
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 1.3e-25 122.1 531 27.3
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 1.7e-25 121.7 604 25.8
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 1.7e-25 121.7 553 26.2
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 2.9e-25 120.9 524 27.1
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 4.9e-25 120.2 590 25.8
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 4.9e-25 120.2 591 27.9
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 1.4e-24 118.6 594 27.4
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.2e-24 117.1 552 27.9
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 5.4e-24 116.7 238 34.5
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 7.1e-24 116.3 562 26.5
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 1.2e-23 115.5 551 26.9
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 2.1e-23 114.8 589 27.5
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 3.5e-23 114.0 415 28.2
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 1.1e-21 109.0 557 26.9
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.1e-21 109.0 557 26.9
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.5e-21 108.6 557 26.8
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 2.5e-21 107.8 547 28.0
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 2.5e-21 107.8 182 38.5
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 2.5e-21 107.8 586 25.9
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 3.3e-21 107.5 516 25.0
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 7.3e-21 106.3 240 35.4
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 7.3e-21 106.3 189 36.0
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 9.6e-21 105.9 148 37.8
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 9.6e-21 105.9 148 41.2
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 1.3e-20 105.5 477 26.6
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 1.3e-20 105.5 211 34.1
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 1.6e-20 105.1 206 34.5
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 2.8e-20 104.4 299 33.8
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 2.8e-20 104.4 387 27.4
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 3.6e-20 104.0 134 39.6
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 3.6e-20 104.0 145 40.0
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 3.6e-20 104.0 520 25.6
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 6.2e-20 103.2 562 25.8
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 8.1e-20 102.8 411 26.5
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 8.1e-20 102.8 551 26.9
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 3.1e-19 100.9 612 26.5
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 4.0e-19 100.5 378 26.7
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 5.3e-19 100.1 618 24.6
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 5.3e-19 100.1 270 30.4
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 6.9e-19 99.8 136 39.7
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 6.9e-19 99.8 576 25.3
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 1.5e-18 98.6 533 26.8
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 2.6e-18 97.8 163 38.0
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 3.4e-18 97.4 137 42.3
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 3.4e-18 97.4 202 35.1
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 5.8e-18 96.7 551 24.0
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 7.6e-18 96.3 166 39.8
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 9.9e-18 95.9 176 37.5
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 9.9e-18 95.9 535 26.4
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 1.3e-17 95.5 238 30.7
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 2.2e-17 94.7 138 37.0
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 2.2e-17 94.7 532 24.1
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 2.2e-17 94.7 557 24.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 3.8e-17 94.0 167 37.1
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 6.4e-17 93.2 507 25.6
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 6.4e-17 93.2 507 25.6
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 6.4e-17 93.2 507 25.6
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 8.4e-17 92.8 178 34.3
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 8.4e-17 92.8 623 23.9
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 1.4e-16 92.0 165 37.0
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 1.4e-16 92.0 206 32.5
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.9e-16 91.7 288 28.8
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 4.2e-16 90.5 544 26.7
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 4.2e-16 90.5 120 37.5
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 5.4e-16 90.1 167 33.5
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 7.1e-16 89.7 499 25.3
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 1.2e-15 89.0 602 25.6
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 2.7e-15 87.8 257 30.0
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 2.7e-15 87.8 205 31.2
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 2.7e-15 87.8 575 25.7
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 3.5e-15 87.4 495 23.2
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 4.6e-15 87.0 168 31.0
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 7.8e-15 86.3 260 29.6
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 1.3e-14 85.5 127 38.6
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 3.9e-14 84.0 170 31.8
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 3.9e-14 84.0 201 30.8
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 1.1e-13 82.4 364 25.5
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 1.1e-13 82.4 560 27.0
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 2.5e-13 81.3 548 24.6
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 3.3e-13 80.9 283 26.9
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 1.3e-12 79.0 129 40.3
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 2.8e-12 77.8 502 24.9
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 6.9e-11 73.2 97 39.2
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 2.0e-10 71.6 521 24.0
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 3.4e-10 70.9 406 23.2
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 3.4e-10 70.9 97 38.1
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 4.5e-10 70.5 547 25.0
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 4.2e-08 63.9 519 22.5
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 4.6e-07 60.5 133 33.1
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.0e-06 59.3 116 34.5
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 1.3e-06 58.9 118 34.7


User provided reference genes

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