Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 8.3e-174 613.6 310 100.0
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.5e-77 293.9 275 58.5
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 5.5e-77 292.0 227 65.6
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 7.2e-77 291.6 280 58.9
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.6e-76 290.4 281 58.4
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 6.1e-76 288.5 287 56.4
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 6.1e-76 288.5 202 70.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 8.0e-76 288.1 287 56.4
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 2.3e-75 286.6 286 56.3
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.3e-75 286.6 280 58.2
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 3.0e-75 286.2 198 70.7
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 5.2e-75 285.4 204 69.1
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 6.7e-75 285.0 206 68.4
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 4.4e-74 282.3 212 67.9
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 5.7e-74 282.0 198 70.2
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.7e-74 282.0 227 65.6
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 7.5e-74 281.6 261 58.6
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 7.5e-74 281.6 286 55.6
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 9.7e-74 281.2 263 59.3
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.3e-73 280.8 211 66.8
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.3e-73 280.8 195 70.3
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 2.2e-73 280.0 213 68.1
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 3.7e-73 279.3 211 66.4
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.7e-73 279.3 282 55.3
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.8e-73 278.9 274 56.6
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 8.2e-73 278.1 230 63.0
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.4e-72 276.6 211 67.8
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.4e-72 276.6 198 69.7
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 3.1e-72 276.2 204 67.6
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 4.1e-72 275.8 205 66.8
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 5.3e-72 275.4 207 68.6
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 5.3e-72 275.4 201 69.2
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 5.3e-72 275.4 235 63.0
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 7.0e-72 275.0 266 57.9
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 7.0e-72 275.0 204 67.2
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 9.1e-72 274.6 210 67.6
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.2e-71 274.2 198 69.2
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.6e-71 273.9 279 56.6
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 2.0e-71 273.5 210 67.6
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.7e-71 273.1 209 67.9
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 4.5e-71 272.3 272 57.4
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 4.5e-71 272.3 228 61.4
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 5.9e-71 271.9 229 63.8
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 5.9e-71 271.9 229 63.8
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 7.7e-71 271.6 237 61.6
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.0e-70 271.2 200 66.5
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.0e-70 271.2 204 66.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.0e-70 271.2 199 67.8
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 1.7e-70 270.4 237 60.3
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.7e-70 270.4 253 59.3
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.9e-70 269.6 198 68.7
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 3.8e-70 269.2 230 62.2
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.0e-70 268.9 221 64.3
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 5.0e-70 268.9 198 68.2
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.9e-69 266.9 276 53.3
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 5.5e-69 265.4 209 64.1
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 9.4e-69 264.6 233 60.5
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 2.1e-68 263.5 208 64.9
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 2.7e-68 263.1 198 65.2
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 2.7e-68 263.1 238 59.7
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 6.1e-68 261.9 311 50.8
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 8.0e-68 261.5 202 64.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.0e-67 261.2 246 57.7
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 1.4e-67 260.8 196 66.8
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.4e-67 260.8 212 64.2
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.3e-67 260.0 238 60.9
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.3e-67 260.0 225 59.6
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.3e-67 260.0 208 63.9
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.0e-67 259.6 198 67.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 5.2e-67 258.8 196 66.8
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 6.8e-67 258.5 197 64.5
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 8.8e-67 258.1 202 67.3
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.0e-66 256.9 195 66.2
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 2.6e-66 256.5 195 67.2
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 7.5e-66 255.0 196 65.8
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 9.8e-66 254.6 196 65.3
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 9.8e-66 254.6 211 61.6
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.3e-65 254.2 197 63.5
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.7e-65 253.8 198 60.1
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.8e-64 250.4 274 50.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 4.1e-64 249.2 192 65.6
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.0e-63 246.9 248 54.8
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 2.7e-63 246.5 212 60.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 1.3e-62 244.2 225 57.8
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.9e-61 240.4 272 51.1
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.5e-61 240.0 220 59.5
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.6e-60 237.3 277 50.2
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.5e-58 230.7 182 64.3
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.5e-58 228.4 248 53.6
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 2.2e-57 226.9 338 42.3
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 3.5e-55 219.5 210 56.7
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 5.0e-54 215.7 219 52.5
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 5.0e-54 215.7 152 70.4
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 3.3e-53 213.0 212 53.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 7.3e-53 211.8 213 57.3
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.6e-52 210.7 231 51.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 3.7e-49 199.5 170 60.6
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 8.0e-44 181.8 182 55.5
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 5.2e-43 179.1 159 60.4
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 7.0e-40 168.7 124 69.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.2e-39 167.9 131 66.4
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.7e-39 166.8 211 49.3
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.3e-38 164.5 127 65.4
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 1.7e-38 164.1 243 41.6
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.6e-31 141.0 111 65.8
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 2.1e-28 130.6 91 69.2
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 4.7e-28 129.4 392 32.1
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 3.4e-26 123.2 147 49.0
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.2e-20 104.8 76 67.1
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 3.4e-18 96.7 75 65.3
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.9e-14 83.2 75 53.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 5.6e-13 79.3 162 37.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.1e-11 75.1 208 31.2
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 6.9e-11 72.4 227 29.1
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.1e-06 56.2 38 71.1
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.1e-06 56.2 68 54.4


User provided reference genes

Program Settings