Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016775 Vanilla planifolia HOM05D001931 ORTHO05D430313 1.9e-71 272.7 174 100.0
Gohir.A05G266000 Gossypium hirsutum HOM05D001931 ORTHO05D001891 1.6e-09 67.0 75 54.7
Duzib093G1373 Durio zibethinus HOM05D001931 ORTHO05D001891 6.2e-09 65.1 59 57.6
Gohir.D05G226700 Gossypium hirsutum HOM05D001931 ORTHO05D001891 1.1e-08 64.3 61 57.4
Gorai.009G234400 Gossypium raimondii HOM05D001931 ORTHO05D001891 1.1e-08 64.3 61 57.4
Phvul.008G176600 Phaseolus vulgaris HOM05D001931 ORTHO05D001891 1.1e-08 64.3 74 48.6
PGSC0003DMG401017754 Solanum tuberosum HOM05D001931 ORTHO05D001891 1.4e-08 63.9 60 56.7
FvH4_5g36690 Fragaria vesca HOM05D001931 ORTHO05D001891 3.1e-08 62.8 37 75.7
FAN18G0025 Fragaria x ananassa HOM05D001931 ORTHO05D001891 3.1e-08 62.8 37 75.7
Oeu021391.2 Olea europaea HOM05D001931 ORTHO05D001891 3.1e-08 62.8 65 50.8
Glyma.14G177100 Glycine max HOM05D001931 ORTHO05D001891 4.0e-08 62.4 51 60.8
Actinidia33126 Actinidia chinensis HOM05D001931 ORTHO05D001891 6.8e-08 61.6 69 49.3
Gohir.D05G268100 Gossypium hirsutum HOM05D001931 ORTHO05D001891 6.8e-08 61.6 38 73.7
Gorai.009G280300 Gossypium raimondii HOM05D001931 ORTHO05D001891 6.8e-08 61.6 38 73.7
RcHm_v2.0_Chr7g0242671 Rosa chinensis HOM05D001931 ORTHO05D001891 6.8e-08 61.6 32 84.4
VMungo0647G1669 Vigna mungo HOM05D001931 ORTHO05D001891 6.8e-08 61.6 51 60.8
COL.COLO4_12018 Corchorus olitorius HOM05D001931 ORTHO05D001891 8.9e-08 61.2 37 75.7
MD08G1187700 Malus domestica HOM05D001931 ORTHO05D001891 8.9e-08 61.2 32 84.4
Oeu057262.1 Olea europaea HOM05D001931 ORTHO05D001891 8.9e-08 61.2 65 49.2
Dinv07068 Davidia involucrata HOM05D001931 ORTHO05D001891 1.2e-07 60.8 32 84.4
Glyma.02G208900 Glycine max HOM05D001931 ORTHO05D001891 1.2e-07 60.8 51 58.8
Lj1g0013367 Lotus japonicus HOM05D001931 ORTHO05D001891 1.2e-07 60.8 63 54.0
Lalb_Chr08g0242161 Lupinus albus HOM05D001931 ORTHO05D001891 1.2e-07 60.8 76 44.7
TAR381G1566 Trochodendron aralioides HOM05D001931 ORTHO05D001891 1.2e-07 60.8 63 52.4
CDE05G0062 Ceratophyllum demersum HOM05D001931 ORTHO05D001891 1.5e-07 60.5 74 50.0
Ciclev10002573m.g Citrus clementina HOM05D001931 ORTHO05D001891 1.5e-07 60.5 32 87.5
Dinv44800 Davidia involucrata HOM05D000219 ORTHO05D001891 1.5e-07 60.5 32 84.4
Duzib041G0742 Durio zibethinus HOM05D001931 ORTHO05D001891 1.5e-07 60.5 35 80.0
Duzib116G0558 Durio zibethinus HOM05D001931 ORTHO05D001891 1.5e-07 60.5 35 80.0
Nitab4.5_0001896g0060 Nicotiana tabacum HOM05D001931 ORTHO05D001891 1.5e-07 60.5 32 84.4
Thecc.08G103000 Theobroma cacao HOM05D001931 ORTHO05D001891 1.5e-07 60.5 35 80.0
CSS0025066 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 2.0e-07 60.1 31 80.6
CSS0041780 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 2.0e-07 60.1 38 68.4
CSS0045551 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 2.0e-07 60.1 38 68.4
Nn1g05447 Nelumbo nucifera HOM05D001931 ORTHO05D001891 2.0e-07 60.1 29 89.7
Os03g0390400 Oryza sativa ssp. japonica HOM05D001931 ORTHO05D001891 2.0e-07 60.1 137 35.8
CANSAT25G2586 Cannabis sativa HOM05D001931 ORTHO05D001891 2.6e-07 59.7 57 59.6
FAN04G1420 Fragaria x ananassa HOM05D001931 ORTHO05D001891 2.6e-07 59.7 31 83.9
SGA_v2.0_scaffold28G11905 Striga asiatica HOM05D001931 ORTHO05D001891 2.6e-07 59.7 128 39.1
MD15G1373600 Malus domestica HOM05D001931 ORTHO05D001891 3.4e-07 59.3 31 83.9
vmacro04716 Vaccinium macrocarpon HOM05D001931 ORTHO05D001891 3.4e-07 59.3 45 60.0
HPP92_009249 Vanilla planifolia HOM05D001931 ORTHO05D001891 3.4e-07 59.3 73 46.6
arahy.Tifrunner.gnm1.ann1.BEHF6G Arachis hypogaea HOM05D001931 ORTHO05D001891 4.4e-07 58.9 35 82.9
DCAR_020002 Daucus carota HOM05D001931 ORTHO05D001891 4.4e-07 58.9 31 80.6
HanXRQChr05g0163091 Helianthus annuus HOM05D001931 ORTHO05D001891 4.4e-07 58.9 77 45.5
PGSC0003DMG402030815 Solanum tuberosum HOM05D001931 ORTHO05D001891 4.4e-07 58.9 32 84.4
Prupe.1G522200 Prunus persica HOM05D001931 ORTHO05D001891 5.8e-07 58.5 61 55.7
Lalb_Chr17g0344271 Lupinus albus HOM05D001931 ORTHO05D001891 7.5e-07 58.2 75 46.7
Nn5g30013 Nelumbo nucifera HOM05D001931 ORTHO05D001891 7.5e-07 58.2 71 46.5
Psat2g070120 Pisum sativum HOM05D001931 ORTHO05D001891 7.5e-07 58.2 32 81.2
SalBow2G2165 Salvia bowleyana HOM05D001931 ORTHO05D001891 7.5e-07 58.2 31 80.6
Cc10_g06750 Coffea canephora HOM05D001931 ORTHO05D001891 9.8e-07 57.8 32 81.2
Nitab4.5_0000786g0110 Nicotiana tabacum HOM05D001931 ORTHO05D001891 9.8e-07 57.8 32 81.2
Peaxi162Scf00030g02219 Petunia axillaris HOM05D001931 ORTHO05D001891 9.8e-07 57.8 32 81.2
Solyc04g074550.4 Solanum lycopersicum HOM05D001931 ORTHO05D001891 9.8e-07 57.8 32 81.2
MSTRG.24444 Avicennia marina HOM05D001931 ORTHO05D001891 1.3e-06 57.4 26 92.3
Ca_05311_v3 Cicer arietinum L. HOM05D001931 ORTHO05D001891 1.3e-06 57.4 53 58.5
Manes.02G149600 Manihot esculenta HOM05D001931 ORTHO05D001891 1.3e-06 57.4 51 60.8
PSO210G5592 Papaver somniferum HOM05D001931 ORTHO05D001891 1.3e-06 57.4 38 71.1
Sopen12g029770 Solanum pennellii HOM05D001931 ORTHO05D001891 1.3e-06 57.4 76 48.7
CAN.G857.5 Capsicum annuum HOM05D001931 ORTHO05D001891 1.7e-06 57.0 60 56.7
DCAR_009578 Daucus carota HOM05D001931 ORTHO05D001891 1.7e-06 57.0 45 64.4
FAN08G0301 Fragaria x ananassa HOM05D001931 ORTHO05D001891 1.7e-06 57.0 26 92.3
FAN13G2228 Fragaria x ananassa HOM05D001931 ORTHO05D001891 1.7e-06 57.0 26 92.3
HanXRQChr10g0277881 Helianthus annuus HOM05D001931 ORTHO05D001891 1.7e-06 57.0 57 50.9
Hma1.2p1_1148F.1_g261630 Hydrangea macrophylla HOM05D001931 ORTHO05D001891 1.7e-06 57.0 68 48.5
MELO3C011044.2 Cucumis melo HOM05D001931 ORTHO05D001891 2.2e-06 56.6 32 78.1
CsaV3_2G029850 Cucumis sativus L. HOM05D001931 ORTHO05D001891 2.2e-06 56.6 32 78.1
Lalb_Chr10g0102511 Lupinus albus HOM05D001931 ORTHO05D001891 2.2e-06 56.6 32 81.2
Hund26981 Selenicereus undatus HOM05D001931 ORTHO05D001891 2.2e-06 56.6 28 89.3
GSVIVG01032622001 Vitis vinifera HOM05D001931 ORTHO05D001891 2.2e-06 56.6 39 64.1
Manes.18G064621 Manihot esculenta HOM05D001931 ORTHO05D001891 2.9e-06 56.2 38 71.1
vmacro21295 Vaccinium macrocarpon HOM05D001931 ORTHO05D001891 2.9e-06 56.2 26 92.3
ATR0684G146 Amborella trichopoda HOM05D001931 ORTHO05D001891 3.7e-06 55.8 28 85.7
AT1G22450 Arabidopsis thaliana HOM05D001931 ORTHO05D001891 3.7e-06 55.8 37 78.4
arahy.Tifrunner.gnm1.ann1.8C5ESF Arachis hypogaea HOM05D001931 ORTHO05D001891 3.7e-06 55.8 35 80.0
CAN.G12.18 Capsicum annuum HOM05D001931 ORTHO05D001891 3.7e-06 55.8 25 96.0
Cfa018026 Carpinus fangiana HOM05D001931 ORTHO05D001891 3.7e-06 55.8 25 96.0
Haze_18104 Corylus avellana HOM05D001931 ORTHO05D001891 3.7e-06 55.8 25 96.0
Eucgr.B00038 Eucalyptus grandis HOM05D001931 ORTHO05D001891 3.7e-06 55.8 28 85.7
Rhsim06G0078300 Rhododendron simsii HOM05D001931 ORTHO05D001891 3.7e-06 55.8 67 46.3
Sed0002634 Sechium edule HOM05D001931 ORTHO05D001891 3.7e-06 55.8 173 33.5
Sc01g0000740 Simmondsia chinensis HOM05D001931 ORTHO05D001891 3.7e-06 55.8 25 96.0
Solyc12g057120.3 Solanum lycopersicum HOM05D001931 ORTHO05D001891 3.7e-06 55.8 25 96.0
THA.LOC104809722 Tarenaya hassleriana HOM05D001931 ORTHO05D001891 3.7e-06 55.8 77 44.2
BcaB03g14203 Brassica carinata HOM05D000219 ORTHO05D001891 4.9e-06 55.5 44 68.2
BcaC06g34965 Brassica carinata HOM05D000219 ORTHO05D000226 4.9e-06 55.5 30 86.7
A07p14430 Brassica napus HOM05D001931 ORTHO05D001891 4.9e-06 55.5 30 86.7
BolC7t42650H Brassica oleracea HOM05D001931 ORTHO05D001891 4.9e-06 55.5 30 86.7
PSO541G4764 Papaver somniferum HOM05D001931 ORTHO05D001891 4.9e-06 55.5 48 58.3
TAR625G0315 Trochodendron aralioides HOM05D001931 ORTHO05D001891 4.9e-06 55.5 70 47.1
AL1G35970 Arabidopsis lyrata HOM05D001931 ORTHO05D001891 6.4e-06 55.1 34 79.4
ECA232G4562 Erigeron canadensis HOM05D000352 ORTHO05D000260 6.4e-06 55.1 42 66.7
Thhalv10008804m.g Eutrema salsugineum HOM05D001931 ORTHO05D001891 6.4e-06 55.1 34 79.4
Sopen04g029580 Solanum pennellii HOM05D001931 ORTHO05D001891 6.4e-06 55.1 32 78.1
Aqoxy2G03826 Aquilegia oxysepala HOM05D001931 ORTHO05D001891 8.3e-06 54.7 28 85.7
BcaC07g39162 Brassica carinata HOM05D001931 ORTHO05D001891 8.3e-06 54.7 61 44.3
BcaNung07231 Brassica carinata HOM05D001931 ORTHO05D001891 8.3e-06 54.7 61 44.3
C08p21550 Brassica napus HOM05D001931 ORTHO05D001891 8.3e-06 54.7 61 44.3
Medtr5g064600 Medicago truncatula HOM05D001931 ORTHO05D001891 8.3e-06 54.7 28 85.7
unitig_578.g16190 Utricularia gibba HOM05D001931 ORTHO05D001891 8.3e-06 54.7 57 52.6
unitig_8.g4843 Utricularia gibba HOM05D001931 ORTHO05D001891 8.3e-06 54.7 67 49.3


User provided reference genes

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