Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016740 Vanilla planifolia HOM05D004562 ORTHO05D005435 2.6e-25 117.9 56 100.0
HPP92_016742 Vanilla planifolia HOM05D004562 ORTHO05D005435 1.4e-23 112.1 52 100.0
Dinv02642 Davidia involucrata HOM05D004562 ORTHO05D005435 1.5e-09 65.5 52 53.8
Hma1.2p1_0163F.1_g072990 Hydrangea macrophylla HOM05D004562 ORTHO05D005435 1.5e-09 65.5 52 53.8
GSVIVG01008458001 Vitis vinifera HOM05D004562 ORTHO05D005435 9.8e-09 62.8 52 48.1
MBI13_g01852_MAGBIO Magnolia biondii HOM05D004562 ORTHO05D005435 1.3e-08 62.4 53 47.2
Nn3g18314 Nelumbo nucifera HOM05D004562 ORTHO05D005435 2.9e-08 61.2 51 47.1
Actinidia35140 Actinidia chinensis HOM05D004562 ORTHO05D005435 4.9e-08 60.5 53 47.2
Ciclev10007290m.g Citrus clementina HOM05D004562 ORTHO05D005435 4.9e-08 60.5 52 46.2
Nn4g24285 Nelumbo nucifera HOM05D004562 ORTHO05D005435 4.9e-08 60.5 51 49.0
Atru.chr9.1669 Acer truncatum HOM05D004562 ORTHO05D005435 1.1e-07 59.3 52 48.1
PSO017G6436 Papaver somniferum HOM05D004562 ORTHO05D005435 1.4e-07 58.9 52 44.2
PSO478G3379 Papaver somniferum HOM05D004562 ORTHO05D005435 2.4e-07 58.2 52 46.2
vmacro16407 Vaccinium macrocarpon HOM05D004562 ORTHO05D005435 5.4e-07 57.0 52 42.3
Manes.14G172200 Manihot esculenta HOM05D004562 ORTHO05D005435 7.0e-07 56.6 52 46.2
Medtr8g107440 Medicago truncatula HOM05D004562 ORTHO05D005435 9.2e-07 56.2 52 42.3
TPR.G1465 Trifolium pratense HOM05D004562 ORTHO05D005435 9.2e-07 56.2 52 42.3
Manes.06G004700 Manihot esculenta HOM05D004562 ORTHO05D005435 1.2e-06 55.8 52 46.2
QL10p030682 Quercus lobata HOM05D004562 ORTHO05D005435 1.2e-06 55.8 52 46.2
HanXRQChr09g0268071 Helianthus annuus HOM05D004562 ORTHO05D005435 1.6e-06 55.5 50 44.0
Lalb_Chr09g0330331 Lupinus albus HOM05D004562 ORTHO05D005435 1.6e-06 55.5 52 44.2
MD14G1237500 Malus domestica HOM05D004562 ORTHO05D005435 1.6e-06 55.5 52 44.2
TAR374G0732 Trochodendron aralioides HOM05D004562 ORTHO05D005435 2.1e-06 55.1 51 47.1
Potri.015G036300 Populus trichocarpa HOM05D004562 ORTHO05D005435 2.7e-06 54.7 52 44.2
CSS0012259 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 4.6e-06 53.9 52 42.3
CSS0042944 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 4.6e-06 53.9 52 42.3
Zm00001eb008950 Zea mays HOM05D004562 ORTHO05D005435 4.6e-06 53.9 52 51.9
FAN08G1802 Fragaria x ananassa HOM05D004562 ORTHO05D005435 6.0e-06 53.5 52 46.2
HanXRQChr02g0032401 Helianthus annuus HOM05D004562 ORTHO05D005435 6.0e-06 53.5 50 44.0
Psat7g001240 Pisum sativum HOM05D004562 ORTHO05D005435 6.0e-06 53.5 52 40.4
Rhsim12G0137700 Rhododendron simsii HOM05D004562 ORTHO05D005435 6.0e-06 53.5 52 40.4
Os03g0221800 Oryza sativa ssp. japonica HOM05D004562 ORTHO05D005435 7.8e-06 53.1 52 40.4
PGR044G1246 Punica granatum HOM05D004562 ORTHO05D005435 7.8e-06 53.1 52 42.3
Thecc.03G058700 Theobroma cacao HOM05D004562 ORTHO05D005435 7.8e-06 53.1 52 44.2


User provided reference genes

Program Settings