Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016723 Vanilla planifolia HOM05D000955 ORTHO05D003340 2.2e-45 185.3 92 100.0
HPP92_016724 Vanilla planifolia HOM05D000955 ORTHO05D003340 4.4e-30 134.4 88 75.0
Aqoxy5G01248 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 2.4e-12 75.5 80 48.8
Nn1g09537 Nelumbo nucifera HOM05D000955 ORTHO05D003340 4.1e-12 74.7 79 51.9
HPP92_004112 Vanilla planifolia HOM05D000955 ORTHO05D003340 1.2e-11 73.2 76 48.7
Aqoxy5G01247 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 3.8e-10 68.2 71 46.5
CDE08G0020 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 3.8e-10 68.2 67 47.8
Peaxi162Scf00064g00006 Petunia axillaris HOM05D000955 ORTHO05D003340 5.0e-10 67.8 67 49.3
Nn5g30250 Nelumbo nucifera HOM05D000955 ORTHO05D003340 1.5e-09 66.2 73 46.6
Nitab4.5_0001847g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 3.3e-09 65.1 75 41.3
Nitab4.5_0006068g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 3.3e-09 65.1 72 41.7
Lsat_1_v5_gn_4_125420 Lactuca sativa HOM05D000955 ORTHO05D001429 4.3e-09 64.7 76 43.4
Nitab4.5_0001101g0030 Nicotiana tabacum HOM05D000955 ORTHO05D001429 4.3e-09 64.7 75 42.7
Ciclev10002898m.g Citrus clementina HOM05D000955 ORTHO05D001429 5.6e-09 64.3 75 40.0
CDE10G0233 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 7.3e-09 63.9 73 46.6
HanXRQChr09g0267841 Helianthus annuus HOM05D000955 ORTHO05D001429 7.3e-09 63.9 76 40.8
Nitab4.5_0002468g0040 Nicotiana tabacum HOM05D000955 ORTHO05D001429 7.3e-09 63.9 72 41.7
CDE10G0229 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 9.5e-09 63.5 69 43.5
Lsat_1_v5_gn_4_125200 Lactuca sativa HOM05D000955 ORTHO05D001429 9.5e-09 63.5 74 44.6
Peaxi162Scf00303g00141 Petunia axillaris HOM05D000955 ORTHO05D001429 9.5e-09 63.5 76 40.8
Manes.12G102501 Manihot esculenta HOM05D000955 ORTHO05D003340 1.2e-08 63.2 67 40.3
MBI02_g02981_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.6e-08 62.8 72 47.2
MBI02_g02982_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.6e-08 62.8 72 47.2
Nitab4.5_0000686g0120 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.6e-08 62.8 72 41.7
MBI02_g02976_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 2.1e-08 62.4 63 47.6
MBI02_g02977_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 2.1e-08 62.4 66 47.0
Nitab4.5_0000686g0100 Nicotiana tabacum HOM05D000955 ORTHO05D001429 2.1e-08 62.4 72 41.7
Actinidia16499 Actinidia chinensis HOM05D000955 ORTHO05D003340 3.6e-08 61.6 67 41.8
CDE06G0816 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 3.6e-08 61.6 67 46.3
MBI02_g02974_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.6e-08 61.6 66 45.5
Nitab4.5_0008115g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 3.6e-08 61.6 72 40.3
MBI02_g02967_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 4.7e-08 61.2 70 41.4
MBI02_g02971_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 4.7e-08 61.2 72 41.7
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 4.7e-08 61.2 66 45.5
TAR628G1637 Trochodendron aralioides HOM05D000955 ORTHO05D003340 4.7e-08 61.2 70 40.0
Oeu004829.1 Olea europaea HOM05D000955 ORTHO05D003340 6.1e-08 60.8 69 43.5
Peaxi162Scf00252g00112 Petunia axillaris HOM05D000955 ORTHO05D001429 6.1e-08 60.8 72 41.7
CAN.G371.24 Capsicum annuum HOM05D000955 ORTHO05D001429 8.0e-08 60.5 76 42.1
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 8.0e-08 60.5 73 41.1
Nitab4.5_0000686g0180 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.0e-08 60.5 72 40.3
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 8.0e-08 60.5 75 45.3
Peaxi162Scf01073g00017 Petunia axillaris HOM05D000955 ORTHO05D003340 8.0e-08 60.5 90 43.3
CAN.G371.23 Capsicum annuum HOM05D000955 ORTHO05D001429 1.0e-07 60.1 75 42.7
DCAR_008793 Daucus carota HOM05D000955 ORTHO05D003340 1.0e-07 60.1 77 42.9
Os09g0458800 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 1.0e-07 60.1 84 39.3
Sopen04g032660 Solanum pennellii HOM05D000955 ORTHO05D001429 1.0e-07 60.1 75 42.7
MBI02_g02963_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.4e-07 59.7 67 46.3
MBI02_g02969_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.4e-07 59.7 76 38.2
MBI02_g02970_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.4e-07 59.7 76 38.2
Atru.chr13.673 Acer truncatum HOM05D000955 ORTHO05D001429 1.8e-07 59.3 73 39.7
MBI02_g02980_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 1.8e-07 59.3 63 44.4
Lj4C144G12 Lonicera japonica HOM05D002458 ORTHO05D002603 2.3e-07 58.9 65 40.0
Potri.007G042700 Populus trichocarpa HOM05D000955 ORTHO05D003340 2.3e-07 58.9 65 38.5
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 2.3e-07 58.9 66 43.9
vmacro21529 Vaccinium macrocarpon HOM05D000955 ORTHO05D003340 2.3e-07 58.9 75 44.0
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 2.3e-07 58.9 75 44.0
Peaxi162Scf00917g00031 Petunia axillaris HOM05D000955 ORTHO05D003340 3.0e-07 58.5 67 40.3
COL.COLO4_11400 Corchorus olitorius HOM05D000955 ORTHO05D003340 4.0e-07 58.2 65 40.0
HanXRQChr09g0267701 Helianthus annuus HOM05D000955 ORTHO05D001429 4.0e-07 58.2 76 39.5
MBI02_g02973_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 4.0e-07 58.2 66 40.9
Manes.13G127500 Manihot esculenta HOM05D000955 ORTHO05D003340 4.0e-07 58.2 67 37.3
Sabra14G0021700 Salix brachista HOM05D000955 ORTHO05D003340 4.0e-07 58.2 70 41.4
Nn1g04889 Nelumbo nucifera HOM05D000955 ORTHO05D003340 5.2e-07 57.8 68 44.1
Nitab4.5_0013573g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 5.2e-07 57.8 65 40.0
Peaxi162Scf00064g00025 Petunia axillaris HOM05D000955 ORTHO05D003340 5.2e-07 57.8 78 43.6
Sabra14G0021900 Salix brachista HOM05D000955 ORTHO05D003340 5.2e-07 57.8 70 41.4
Nitab4.5_0000686g0190 Nicotiana tabacum HOM05D000955 ORTHO05D001429 6.8e-07 57.4 72 38.9
Prupe.1G437300 Prunus persica HOM05D000955 ORTHO05D003340 6.8e-07 57.4 76 42.1
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 6.8e-07 57.4 65 43.1
CAN.G445.5 Capsicum annuum HOM05D000955 ORTHO05D001429 8.9e-07 57.0 73 41.1
MBI02_g02979_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 8.9e-07 57.0 58 48.3
Nitab4.5_0000728g0030 Nicotiana tabacum HOM05D000955 ORTHO05D003340 8.9e-07 57.0 67 38.8
Nitab4.5_0002263g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 8.9e-07 57.0 67 40.3
Sc15g0003450 Simmondsia chinensis HOM05D000955 ORTHO05D001429 8.9e-07 57.0 73 39.7
PGSC0003DMG400025477 Solanum tuberosum HOM05D000955 ORTHO05D003340 8.9e-07 57.0 67 40.3
Solyc02g065010.1 Solanum lycopersicum HOM05D000955 ORTHO05D003340 1.2e-06 56.6 67 40.3
Sopen02g015140 Solanum pennellii HOM05D000955 ORTHO05D003340 1.2e-06 56.6 67 40.3
Peaxi162Scf00917g00047 Petunia axillaris HOM05D000955 ORTHO05D003340 1.5e-06 56.2 65 38.5
PGSC0003DMG400008043 Solanum tuberosum HOM05D000955 ORTHO05D001429 1.5e-06 56.2 67 40.3
Eucgr.F00233 Eucalyptus grandis HOM05D000955 ORTHO05D003340 2.0e-06 55.8 69 42.0
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 2.6e-06 55.5 73 39.7
ECA246G3551 Erigeron canadensis HOM05D000955 ORTHO05D003340 2.6e-06 55.5 67 41.8
Nitab4.5_0006312g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 2.6e-06 55.5 73 41.1
Sopen01g015530 Solanum pennellii HOM05D000955 ORTHO05D001429 2.6e-06 55.5 66 40.9
Migut.C00586 Erythranthe guttata HOM05D000955 ORTHO05D003340 3.4e-06 55.1 69 44.9
Migut.H00440 Erythranthe guttata HOM05D000955 ORTHO05D003340 3.4e-06 55.1 65 44.6
Peaxi162Scf00064g00002 Petunia axillaris HOM05D000955 ORTHO05D003340 3.4e-06 55.1 73 43.8
Rhsim07G0229400 Rhododendron simsii HOM05D000955 ORTHO05D003340 3.4e-06 55.1 67 41.8
PGSC0003DMG400008042 Solanum tuberosum HOM05D000955 ORTHO05D001429 3.4e-06 55.1 75 38.7
Eucgr.F00234 Eucalyptus grandis HOM05D000955 ORTHO05D003340 4.4e-06 54.7 69 40.6
Os07g0619400 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 4.4e-06 54.7 67 44.8
RcHm_v2.0_Chr6g0278331 Rosa chinensis HOM05D000955 ORTHO05D001429 4.4e-06 54.7 71 33.8
Atru.chr13.672 Acer truncatum HOM05D000955 ORTHO05D001429 5.7e-06 54.3 49 46.9
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 5.7e-06 54.3 73 39.7
ECA232G3034 Erigeron canadensis HOM05D000955 ORTHO05D003340 5.7e-06 54.3 71 39.4
TPR.G10919 Trifolium pratense HOM05D000955 ORTHO05D003340 5.7e-06 54.3 70 41.4
HPP92_004230 Vanilla planifolia HOM05D000955 ORTHO05D003340 5.7e-06 54.3 86 33.7
CAN.G165.19 Capsicum annuum HOM05D000955 ORTHO05D003340 7.5e-06 53.9 67 38.8
FAN28G2528 Fragaria x ananassa HOM05D000955 ORTHO05D003340 7.5e-06 53.9 65 44.6
MBI02_g02978_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 7.5e-06 53.9 66 39.4
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 9.8e-06 53.5 72 40.3
Rhsim06G0048800 Rhododendron simsii HOM05D000955 ORTHO05D003340 9.8e-06 53.5 47 48.9


User provided reference genes

Program Settings