Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.8e-146 521.9 267 100.0
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.2e-101 373.6 254 74.0
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.8e-101 372.5 254 73.2
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.6e-101 372.1 261 70.9
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 1.1e-100 370.5 260 70.8
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 2.0e-99 366.3 256 72.3
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 2.6e-99 365.9 251 71.7
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 4.4e-99 365.2 258 69.8
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 5.8e-99 364.8 276 66.7
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 7.5e-99 364.4 259 71.8
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.3e-98 363.6 259 70.3
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 2.2e-98 362.8 259 70.3
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 2.9e-98 362.5 259 70.7
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 3.7e-98 362.1 253 71.9
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 8.3e-98 360.9 254 70.9
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 1.4e-97 360.1 256 71.1
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.4e-97 359.4 251 70.9
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 4.1e-97 358.6 235 74.0
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 4.1e-97 358.6 256 71.1
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 5.4e-97 358.2 259 70.7
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 5.4e-97 358.2 263 68.8
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.4e-97 358.2 261 68.2
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 7.1e-97 357.8 261 70.1
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 9.2e-97 357.5 256 71.5
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.2e-96 357.1 262 70.2
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.1e-96 356.3 259 69.1
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 2.7e-96 355.9 259 69.9
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 6.0e-96 354.8 261 69.7
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 6.0e-96 354.8 254 70.9
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 1.3e-95 353.6 255 69.0
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.3e-95 353.6 259 69.5
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 2.3e-95 352.8 247 72.1
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 3.0e-95 352.4 254 70.9
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 3.9e-95 352.1 246 71.5
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.6e-95 351.3 255 68.6
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 1.5e-94 350.1 259 68.7
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.5e-94 350.1 237 72.2
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 5.6e-94 348.2 245 69.4
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 7.3e-94 347.8 270 65.6
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 9.5e-94 347.4 259 68.3
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 9.5e-94 347.4 235 71.5
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.2e-93 347.1 236 72.0
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 1.2e-93 347.1 259 68.0
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.2e-93 347.1 255 68.6
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.1e-93 346.3 256 67.6
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.1e-93 346.3 252 69.0
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 2.1e-93 346.3 248 69.0
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 2.1e-93 346.3 259 67.6
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 2.1e-93 346.3 238 71.0
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.6e-93 345.5 234 73.1
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 3.6e-93 345.5 241 69.7
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 8.1e-93 344.4 237 73.0
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.1e-92 344.0 271 64.9
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 1.1e-92 344.0 236 71.6
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 1.1e-92 344.0 236 71.6
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 1.4e-92 343.6 259 67.6
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.4e-92 343.6 243 71.2
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.8e-92 341.3 263 65.8
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 6.8e-92 341.3 247 68.8
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 3.4e-91 339.0 251 68.5
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 4.4e-91 338.6 236 71.2
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 7.6e-91 337.8 242 70.2
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 1.3e-90 337.0 259 66.4
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.1e-89 334.0 239 69.5
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.2e-89 332.4 238 70.6
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 5.4e-89 331.6 255 65.9
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 5.4e-89 331.6 245 66.9
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 7.1e-89 331.3 252 62.7
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 7.1e-89 331.3 238 68.5
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 9.2e-89 330.9 237 69.6
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.2e-88 330.5 242 68.2
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 2.7e-88 329.3 236 70.3
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.5e-88 328.9 253 63.2
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 6.0e-88 328.2 238 68.9
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.8e-88 327.8 249 64.3
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.7e-87 326.6 241 67.2
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 3.0e-87 325.9 238 68.1
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 3.0e-87 325.9 238 68.1
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 3.0e-87 325.9 238 68.1
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 3.9e-87 325.5 241 68.0
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 5.1e-87 325.1 251 64.1
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 5.1e-87 325.1 237 68.8
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.1e-86 323.9 238 68.5
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 1.5e-86 323.6 239 67.4
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.9e-86 323.2 244 66.0
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 2.5e-86 322.8 238 68.5
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 9.6e-86 320.9 260 61.9
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.6e-85 320.1 239 66.9
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 6.2e-85 318.2 248 64.9
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 4.0e-84 315.5 193 78.8
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 4.4e-83 312.0 235 68.1
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 7.6e-83 311.2 196 78.1
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.9e-82 309.3 205 76.6
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.9e-81 306.6 191 79.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 9.3e-81 304.3 192 76.6
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 2.7e-80 302.8 191 76.4
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 3.5e-80 302.4 189 77.8
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 3.5e-80 302.4 191 74.9
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 4.6e-80 302.0 261 60.5
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 1.1e-78 297.4 191 75.4
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.1e-78 297.4 194 72.2
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 1.9e-78 296.6 195 75.4
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 5.6e-78 295.0 191 75.4
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 9.6e-78 294.3 196 73.0
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 3.6e-77 292.4 191 74.9
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 3.6e-77 292.4 191 74.9
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 8.1e-77 291.2 238 61.3
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.5e-75 287.0 218 63.3
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 6.0e-72 275.0 228 60.5
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 1.7e-71 273.5 204 70.1
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 3.3e-70 269.2 192 70.8
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.4e-68 263.1 238 59.2
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 3.8e-58 229.2 142 75.4
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 8.4e-58 228.0 179 62.0
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 1.2e-56 224.2 127 84.3
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 3.3e-54 216.1 235 51.5
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.7e-40 169.9 133 62.4
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.9e-31 139.4 97 73.2
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 4.8e-13 79.3 56 66.1
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 4.1e-12 76.3 67 56.7
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.1e-12 76.3 51 72.5
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 4.1e-12 76.3 272 26.8


User provided reference genes

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