Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016509 Vanilla planifolia HOM05D002166 ORTHO05D002634 1.5e-55 219.2 102 100.0
HPP92_016529 Vanilla planifolia HOM05D002166 ORTHO05D002634 3.5e-28 128.3 73 82.2
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 1.0e-11 73.6 62 54.8
MBI02_g24810_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 1.0e-11 73.6 52 59.6
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 2.3e-11 72.4 62 56.5
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 8.6e-11 70.5 52 57.7
ATR0752G109 Amborella trichopoda HOM05D002166 ORTHO05D002634 1.5e-10 69.7 52 55.8
Ciclev10007979m.g Citrus clementina HOM05D002166 ORTHO05D002634 3.3e-10 68.6 52 57.7
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 3.3e-10 68.6 53 52.8
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 7.3e-10 67.4 53 58.5
COL.COLO4_09660 Corchorus olitorius HOM05D002166 ORTHO05D002634 1.6e-09 66.2 63 49.2
Cpa.g.sc97.2 Carica papaya HOM05D002166 ORTHO05D002634 2.1e-09 65.9 82 46.3
Cc05_g13700 Coffea canephora HOM05D002166 ORTHO05D002634 2.1e-09 65.9 61 50.8
Thecc.07G037300 Theobroma cacao HOM05D002166 ORTHO05D002634 2.8e-09 65.5 53 58.5
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 3.6e-09 65.1 59 55.9
TAR626G0812 Trochodendron aralioides HOM05D002166 ORTHO05D002634 3.6e-09 65.1 82 42.7
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 4.7e-09 64.7 53 54.7
Eucgr.F00765 Eucalyptus grandis HOM05D002166 ORTHO05D002634 4.7e-09 64.7 47 57.4
CSS0030432 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 1.1e-08 63.5 55 50.9
Hma1.2p1_0673F.1_g201340 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 1.1e-08 63.5 47 57.4
Os05g0498500 Oryza sativa ssp. japonica HOM05D002166 ORTHO05D002634 1.1e-08 63.5 77 46.8
Gohir.A01G079400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.8e-08 62.8 60 45.0
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.8e-08 62.8 60 45.0
TAR624G1431 Trochodendron aralioides HOM05D002166 ORTHO05D002634 1.8e-08 62.8 36 77.8
Zm00001eb431290 Zea mays HOM05D002166 ORTHO05D002634 1.8e-08 62.8 52 51.9
Hma1.2p1_2464F.1_g322600 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 2.3e-08 62.4 38 65.8
Hma1.2p1_3160F.1_g333440 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 2.3e-08 62.4 38 65.8
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 2.3e-08 62.4 60 46.7
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 3.1e-08 62.0 71 43.7
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 3.1e-08 62.0 45 55.6
Aqoxy1G02169 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 4.0e-08 61.6 60 48.3
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 4.0e-08 61.6 45 55.6
PSO541G1388 Papaver somniferum HOM05D002166 ORTHO05D002634 4.0e-08 61.6 53 56.6
Potri.011G090100 Populus trichocarpa HOM05D002166 ORTHO05D002634 4.0e-08 61.6 62 51.6
Gohir.D13G143100 Gossypium hirsutum HOM05D002166 ORTHO05D002634 5.2e-08 61.2 38 65.8
Gorai.013G160000 Gossypium raimondii HOM05D002166 ORTHO05D002634 5.2e-08 61.2 38 65.8
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 5.2e-08 61.2 43 55.8
Zm00001eb070190 Zea mays HOM05D002166 ORTHO05D002634 5.2e-08 61.2 43 62.8
Dinv13887 Davidia involucrata HOM05D002166 ORTHO05D002634 8.9e-08 60.5 35 71.4
Dinv22263 Davidia involucrata HOM05D002166 ORTHO05D002634 8.9e-08 60.5 55 52.7
Sabra11G0086400 Salix brachista HOM05D002166 ORTHO05D002634 8.9e-08 60.5 82 43.9
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 1.2e-07 60.1 49 53.1
Duzib213G0813 Durio zibethinus HOM05D002166 ORTHO05D002634 1.5e-07 59.7 44 63.6
Gohir.A04G016800 Gossypium hirsutum HOM05D002166 ORTHO05D002634 1.5e-07 59.7 53 50.9
Gorai.009G438100 Gossypium raimondii HOM05D002166 ORTHO05D002634 1.5e-07 59.7 53 50.9
Gorai.002G088400 Gossypium raimondii HOM05D002166 ORTHO05D002634 2.6e-07 58.9 60 45.0
THA.LOC104817854 Tarenaya hassleriana HOM05D002166 ORTHO05D002634 2.6e-07 58.9 63 52.4
Zm00001eb099560 Zea mays HOM05D002166 ORTHO05D002634 2.6e-07 58.9 52 50.0
Gohir.D05G369400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 3.4e-07 58.5 62 45.2
MBI18_g36060_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 4.4e-07 58.2 42 54.8
Sabra16G0235500 Salix brachista HOM05D002166 ORTHO05D002634 4.4e-07 58.2 59 50.8
Hund01993 Selenicereus undatus HOM05D002166 ORTHO05D002634 5.8e-07 57.8 35 68.6
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 7.5e-07 57.4 45 53.3
Gohir.A13G138300 Gossypium hirsutum HOM05D002166 ORTHO05D002634 9.8e-07 57.0 47 48.9
Sc03g0008590 Simmondsia chinensis HOM05D002166 ORTHO05D002634 1.3e-06 56.6 44 54.5
Nitab4.5_0006428g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 1.7e-06 56.2 45 53.3
QL05p073305 Quercus lobata HOM05D002166 ORTHO05D002634 1.7e-06 56.2 46 56.5
Nitab4.5_0000981g0080 Nicotiana tabacum HOM05D002166 ORTHO05D002634 2.2e-06 55.8 37 64.9
Thecc.06G219700 Theobroma cacao HOM05D002166 ORTHO05D002634 2.2e-06 55.8 46 54.3
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 2.9e-06 55.5 44 54.5
PSO675G8999 Papaver somniferum HOM05D002166 ORTHO05D002634 2.9e-06 55.5 43 58.1
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 2.9e-06 55.5 37 67.6
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 3.7e-06 55.1 52 48.1
Nitab4.5_0011129g0010 Nicotiana tabacum HOM05D002166 ORTHO05D002634 3.7e-06 55.1 45 51.1
Os04g0625000 Oryza sativa ssp. japonica HOM05D002166 ORTHO05D002634 3.7e-06 55.1 52 46.2
SGA_v2.0_scaffold18G08536 Striga asiatica HOM05D002166 ORTHO05D002634 3.7e-06 55.1 53 52.8
DCAR_016704 Daucus carota HOM05D002166 ORTHO05D002634 4.9e-06 54.7 36 63.9
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 4.9e-06 54.7 41 68.3
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 4.9e-06 54.7 47 48.9
RhsimUnG0250700 Rhododendron simsii HOM05D002166 ORTHO05D002634 4.9e-06 54.7 36 66.7
Oeu007581.1 Olea europaea HOM05D002166 ORTHO05D002634 6.4e-06 54.3 63 42.9
Peaxi162Scf01097g00414 Petunia axillaris HOM05D002166 ORTHO05D002634 8.3e-06 53.9 46 56.5
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 8.3e-06 53.9 46 52.2
Sopen12g001020 Solanum pennellii HOM05D002166 ORTHO05D002634 8.3e-06 53.9 44 56.8


User provided reference genes

Program Settings