Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016508 Vanilla planifolia HOM05D002166 ORTHO05D002634 1.3e-51 206.1 104 100.0
HPP92_016529 Vanilla planifolia HOM05D002166 ORTHO05D002634 3.4e-47 191.4 99 98.0
CDE12G0015 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 2.9e-14 82.0 91 49.5
MBI02_g07160_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 2.1e-12 75.9 101 41.6
CDE01G0821 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 6.1e-12 74.3 91 47.3
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 7.9e-12 73.9 87 44.8
Aqoxy1G02169 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 1.0e-11 73.6 89 50.6
GSVIVG01012735001 Vitis vinifera HOM05D002166 ORTHO05D002634 1.0e-11 73.6 90 48.9
PSO832G4614 Papaver somniferum HOM05D002166 ORTHO05D002634 5.1e-11 71.2 74 51.4
PSO210G4122 Papaver somniferum HOM05D002166 ORTHO05D002634 6.7e-11 70.9 69 53.6
ATR0752G109 Amborella trichopoda HOM05D002166 ORTHO05D002634 1.1e-10 70.1 101 40.6
TAR624G1431 Trochodendron aralioides HOM05D002166 ORTHO05D002634 1.1e-10 70.1 90 43.3
PSO541G1388 Papaver somniferum HOM05D002166 ORTHO05D002634 1.5e-10 69.7 90 46.7
PSO675G8999 Papaver somniferum HOM05D002166 ORTHO05D002634 1.5e-10 69.7 90 46.7
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 5.7e-10 67.8 110 44.5
Glyma.14G024000 Glycine max HOM05D002166 ORTHO05D002634 5.7e-10 67.8 91 50.5
HPP92_014125 Vanilla planifolia HOM05D002166 ORTHO05D002634 5.7e-10 67.8 65 52.3
TAR623G0404 Trochodendron aralioides HOM05D002166 ORTHO05D002634 7.4e-10 67.4 74 50.0
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 1.7e-09 66.2 110 43.6
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 1.7e-09 66.2 74 52.7
TAR629G0586 Trochodendron aralioides HOM05D002166 ORTHO05D002634 4.8e-09 64.7 74 48.6
FvH4_3g22650 Fragaria vesca HOM05D002166 ORTHO05D002634 6.3e-09 64.3 71 54.9
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 6.3e-09 64.3 71 54.9
Lj6g0008473 Lotus japonicus HOM05D002166 ORTHO05D002634 1.1e-08 63.5 103 42.7
FAN25G0402 Fragaria x ananassa HOM05D002166 ORTHO05D002634 1.4e-08 63.2 71 53.5
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.8e-08 62.8 86 44.2
FAN16G1047 Fragaria x ananassa HOM05D002166 ORTHO05D002634 1.8e-08 62.8 71 53.5
FAN21G3541 Fragaria x ananassa HOM05D002166 ORTHO05D002634 1.8e-08 62.8 71 53.5
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 1.8e-08 62.8 84 48.8
Glyma.18G097100 Glycine max HOM05D002166 ORTHO05D002634 2.4e-08 62.4 74 51.4
CDE05G0357 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 4.1e-08 61.6 75 44.0
Duzib170G0116 Durio zibethinus HOM05D002166 ORTHO05D002634 4.1e-08 61.6 100 40.0
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 4.1e-08 61.6 69 53.6
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 4.1e-08 61.6 80 41.2
RcHm_v2.0_Chr5g0039421 Rosa chinensis HOM05D002166 ORTHO05D002634 5.3e-08 61.2 71 52.1
Phvul.006G042900 Phaseolus vulgaris HOM05D002166 ORTHO05D002634 6.9e-08 60.8 67 53.7
Solyc07g064580.3 Solanum lycopersicum HOM05D002166 ORTHO05D002634 9.1e-08 60.5 70 50.0
Sopen07g032770 Solanum pennellii HOM05D002166 ORTHO05D002634 9.1e-08 60.5 70 50.0
PGSC0003DMG400022320 Solanum tuberosum HOM05D002166 ORTHO05D002634 9.1e-08 60.5 70 50.0
Glyma.02G290700 Glycine max HOM05D002166 ORTHO05D002634 1.2e-07 60.1 69 50.7
MD05G1345300 Malus domestica HOM05D002166 ORTHO05D002634 1.2e-07 60.1 67 46.3
Potri.011G090100 Populus trichocarpa HOM05D002166 ORTHO05D002634 1.2e-07 60.1 69 55.1
QL08p010329 Quercus lobata HOM05D002166 ORTHO05D002634 1.5e-07 59.7 69 53.6
A06p02960 Brassica napus HOM05D002166 ORTHO05D002634 2.0e-07 59.3 105 38.1
BraA06t23502Z Brassica rapa HOM05D002166 ORTHO05D002634 2.0e-07 59.3 105 38.1
VMungo0540G1154 Vigna mungo HOM05D002166 ORTHO05D002634 2.0e-07 59.3 90 44.4
Glyma.08G315800 Glycine max HOM05D002166 ORTHO05D002634 2.6e-07 58.9 67 52.2
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 3.4e-07 58.5 74 44.6
BcaB07g33506 Brassica carinata HOM05D002166 ORTHO05D002634 3.4e-07 58.5 105 37.1
BcaC08g43244 Brassica carinata HOM05D002166 ORTHO05D002634 3.4e-07 58.5 105 37.1
C06p05920 Brassica napus HOM05D002166 ORTHO05D002634 3.4e-07 58.5 105 37.1
BolC6t35705H Brassica oleracea HOM05D002166 ORTHO05D002634 3.4e-07 58.5 105 37.1
CDE02G2372 Ceratophyllum demersum HOM05D002166 ORTHO05D002634 3.4e-07 58.5 98 39.8
Lalb_Chr04g0248451 Lupinus albus HOM05D002166 ORTHO05D002634 3.4e-07 58.5 69 47.8
MD03G1201300 Malus domestica HOM05D002166 ORTHO05D002634 3.4e-07 58.5 103 42.7
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 4.5e-07 58.2 90 41.1
TPR.G1145 Trifolium pratense HOM05D002166 ORTHO05D002634 4.5e-07 58.2 71 50.7
CiPaw.12G129600 Carya illinoinensis HOM05D002166 ORTHO05D002634 5.9e-07 57.8 75 48.0
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 5.9e-07 57.8 67 52.2
Sabra16G0235500 Salix brachista HOM05D002166 ORTHO05D002634 5.9e-07 57.8 69 50.7
AL1G58330 Arabidopsis lyrata HOM05D002166 ORTHO05D002634 7.7e-07 57.4 74 43.2
MD11G1218700 Malus domestica HOM05D002166 ORTHO05D002634 7.7e-07 57.4 83 47.0
PGR083G0038 Punica granatum HOM05D002166 ORTHO05D002634 7.7e-07 57.4 90 42.2
Ciclev10007979m.g Citrus clementina HOM05D002166 ORTHO05D002634 1.0e-06 57.0 69 47.8
Lalb_Chr10g0106961 Lupinus albus HOM05D002166 ORTHO05D002634 1.0e-06 57.0 90 43.3
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 1.3e-06 56.6 74 43.2
Sp1g37510 Schrenkiella parvula HOM05D002166 ORTHO05D002634 1.7e-06 56.2 105 35.2
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 1.7e-06 56.2 69 49.3
Carub.0001s3970 Capsella rubella HOM05D002166 ORTHO05D002634 2.2e-06 55.8 74 41.9
ClCG09G010790 Citrullus lanatus HOM05D002166 ORTHO05D002634 2.2e-06 55.8 90 42.2
Duzib213G0813 Durio zibethinus HOM05D002166 ORTHO05D002634 2.2e-06 55.8 90 41.1
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 2.2e-06 55.8 74 41.9
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 2.2e-06 55.8 90 40.0
Gorai.002G088400 Gossypium raimondii HOM05D002166 ORTHO05D002634 2.2e-06 55.8 90 40.0
LjContig00272g0027317 Lotus japonicus HOM05D002166 ORTHO05D002634 2.9e-06 55.5 70 47.1
Thecc.07G037300 Theobroma cacao HOM05D002166 ORTHO05D002634 2.9e-06 55.5 90 40.0
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 2.9e-06 55.5 69 47.8
Cpa.g.sc97.2 Carica papaya HOM05D002166 ORTHO05D002634 3.8e-06 55.1 75 46.7
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 3.8e-06 55.1 69 46.4
Gohir.A01G079400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 3.8e-06 55.1 90 38.9
Lj8A169T85 Lonicera japonica HOM05D002166 ORTHO05D002634 3.8e-06 55.1 74 47.3
MBI18_g36060_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 3.8e-06 55.1 89 33.7
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 5.0e-06 54.7 74 40.5
Oeu042937.1 Olea europaea HOM05D002166 ORTHO05D002634 5.0e-06 54.7 90 45.6
Sed0003386 Sechium edule HOM05D002166 ORTHO05D002634 5.0e-06 54.7 90 40.0
Lsat_1_v5_gn_5_4021 Lactuca sativa HOM05D002166 ORTHO05D002634 6.5e-06 54.3 69 47.8
Sabra11G0086400 Salix brachista HOM05D002166 ORTHO05D002634 6.5e-06 54.3 66 51.5
Actinidia05096 Actinidia chinensis HOM05D002166 ORTHO05D002634 8.5e-06 53.9 69 44.9
Ca_05515_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 8.5e-06 53.9 67 47.8
Dinv22263 Davidia involucrata HOM05D002166 ORTHO05D002634 8.5e-06 53.9 66 48.5
Lalb_Chr17g0348461 Lupinus albus HOM05D002166 ORTHO05D002634 8.5e-06 53.9 69 46.4
Medtr5g092610 Medicago truncatula HOM05D002166 ORTHO05D002634 8.5e-06 53.9 71 46.5
Peaxi162Scf00964g00022 Petunia axillaris HOM05D002166 ORTHO05D002634 8.5e-06 53.9 69 46.4
THA.LOC104817854 Tarenaya hassleriana HOM05D002166 ORTHO05D002634 8.5e-06 53.9 74 43.2


User provided reference genes

Program Settings