Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 7.9e-169 597.0 307 100.0
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.6e-92 343.6 238 81.5
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.4e-88 330.5 328 56.4
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 6.9e-88 328.2 307 58.0
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.6e-87 326.2 343 54.8
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 9.9e-87 324.3 321 56.1
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 3.8e-86 322.4 328 54.6
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 4.9e-86 322.0 337 53.7
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 4.9e-86 322.0 345 53.0
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 6.4e-86 321.6 330 54.8
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 1.4e-85 320.5 314 57.3
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.9e-85 320.1 319 56.7
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.2e-85 319.3 328 54.9
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 3.2e-85 319.3 342 53.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.2e-85 318.9 324 54.3
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 4.2e-85 318.9 325 54.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 5.5e-85 318.5 314 56.1
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 7.1e-85 318.2 325 54.2
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.3e-85 317.8 318 55.3
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.7e-84 316.2 321 55.5
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 3.5e-84 315.8 327 54.4
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 4.6e-84 315.5 321 54.5
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 4.6e-84 315.5 318 54.7
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 6.0e-84 315.1 314 55.7
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 7.9e-84 314.7 313 54.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 7.9e-84 314.7 321 55.1
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.3e-83 313.2 316 55.1
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.0e-83 312.8 323 54.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.9e-83 312.4 320 53.8
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 6.7e-83 311.6 302 57.3
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.1e-82 310.8 319 54.9
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.1e-82 310.8 338 51.8
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.5e-82 310.5 319 55.5
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.9e-82 310.1 330 52.7
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.5e-82 309.7 310 56.1
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 2.5e-82 309.7 314 55.7
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.3e-82 309.3 329 54.7
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.3e-82 308.9 311 56.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 5.6e-82 308.5 346 50.6
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.6e-82 308.5 295 56.9
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 7.4e-82 308.1 318 53.8
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 9.6e-82 307.8 330 53.6
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-81 307.4 310 55.8
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-81 307.4 310 55.8
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 2.1e-81 306.6 317 54.6
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 2.8e-81 306.2 310 56.8
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 2.4e-80 303.1 344 51.5
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.1e-80 302.8 332 51.2
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 3.1e-80 302.8 307 56.7
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 3.1e-80 302.8 302 57.0
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 4.0e-80 302.4 316 54.1
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.3e-80 302.0 313 55.3
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 6.9e-80 301.6 313 54.6
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 9.0e-80 301.2 311 52.7
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 9.0e-80 301.2 311 55.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 9.0e-80 301.2 390 47.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-79 300.1 314 54.1
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.6e-79 299.7 303 55.4
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 2.6e-79 299.7 311 54.3
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 4.5e-79 298.9 314 51.3
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 5.8e-79 298.5 313 55.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 5.8e-79 298.5 309 54.0
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 7.6e-79 298.1 314 53.5
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 7.6e-79 298.1 319 53.0
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.9e-78 296.2 306 54.2
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 4.9e-78 295.4 340 50.0
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 6.5e-78 295.0 374 47.3
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 6.5e-78 295.0 330 52.1
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 8.4e-78 294.7 325 51.1
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 8.4e-78 294.7 328 50.6
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 8.4e-78 294.7 310 55.5
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 2.5e-77 293.1 306 52.3
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.5e-77 293.1 318 52.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 5.5e-77 292.0 285 57.9
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 7.1e-77 291.6 287 55.4
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 7.1e-77 291.6 328 51.5
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.6e-76 288.9 298 56.0
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 6.0e-76 288.5 319 53.0
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 7.9e-76 288.1 303 55.1
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.3e-75 287.3 301 53.8
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 5.7e-74 282.0 313 52.7
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 9.6e-74 281.2 360 48.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.3e-73 280.8 303 52.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-72 277.3 310 52.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-72 276.9 311 51.4
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.0e-72 274.6 320 50.0
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 3.8e-70 269.2 287 55.1
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-68 264.2 332 47.9
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.1e-67 258.8 328 48.2
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.5e-66 256.5 372 44.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.3e-62 244.2 277 53.1
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.7e-60 236.5 431 37.6
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.1e-60 235.3 243 55.1
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 3.0e-59 233.0 257 52.5
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.7e-58 228.8 265 52.1
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.7e-58 228.8 265 51.7
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.2e-57 224.9 318 44.7
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 7.9e-52 208.4 257 47.9
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 4.1e-48 196.1 274 46.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 2.2e-46 190.3 157 63.7
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.9e-45 187.2 292 38.7
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.0e-43 181.4 161 62.7
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 9.7e-42 174.9 214 48.6
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.3e-40 169.1 234 45.7
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.0e-38 162.5 115 74.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 6.1e-36 155.6 119 64.7
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 4.0e-35 152.9 149 55.0
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.8e-35 152.1 114 64.9
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.3e-33 147.9 151 51.7
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 2.2e-33 147.1 150 53.3
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.4e-32 144.4 287 35.2
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.0e-31 140.6 274 40.9
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 9.5e-29 131.7 243 37.0
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 2.2e-25 120.6 108 58.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-24 117.5 77 67.5
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 2.7e-23 113.6 87 60.9
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.3e-22 110.5 179 40.2
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.9e-22 110.2 86 59.3
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.8e-19 100.9 131 46.6
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.3e-19 100.5 65 72.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 5.2e-19 99.4 154 44.2
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.0e-18 97.4 66 68.2
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 4.4e-18 96.3 64 70.3
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.2e-17 94.0 66 71.2
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 7.0e-16 89.0 73 57.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 4.6e-15 86.3 68 58.8
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.5e-13 81.3 309 25.2
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 9.5e-13 78.6 83 49.4
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.2e-12 78.2 86 39.5
HPP92_027198 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.2e-12 78.2 37 100.0
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 2.8e-12 77.0 72 56.9
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.8e-12 77.0 141 41.8
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 9.8e-10 68.6 164 32.3
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 2.9e-09 67.0 61 54.1
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 2.9e-09 67.0 101 43.6
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 3.5e-07 60.1 255 25.5
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 4.6e-07 59.7 258 25.2
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.3e-06 58.2 303 23.8


User provided reference genes

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