Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016295 Vanilla planifolia HOM05D000045 ORTHO05D010736 1.9e-43 178.7 86 100.0
HPP92_016315 Vanilla planifolia HOM05D000045 ORTHO05D000067 3.3e-40 167.9 85 94.1
Os06g0166100 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 4.4e-16 87.8 69 55.1
Os02g0550900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 6.3e-15 84.0 70 54.3
Zm00001eb243420 Zea mays HOM05D000045 ORTHO05D010736 1.1e-14 83.2 70 54.3
Os12g0160900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.0e-13 79.0 59 57.6
Cc07_g21320 Coffea canephora HOM05D000045 ORTHO05D000611 2.7e-13 78.6 81 45.7
SGA_v2.0_scaffold148G36396 Striga asiatica HOM05D000045 ORTHO05D000611 3.5e-13 78.2 64 54.7
Oeu020500.1 Olea europaea HOM05D000045 ORTHO05D000611 5.9e-13 77.4 82 46.3
MSTRG.19576 Avicennia marina HOM05D000045 ORTHO05D000611 1.3e-12 76.3 64 53.1
Migut.J01148 Erythranthe guttata HOM05D000045 ORTHO05D000611 1.3e-12 76.3 64 50.0
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 1.9e-11 72.4 65 53.8
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 1.9e-11 72.4 65 53.8
PGR044G2175 Punica granatum HOM05D000045 ORTHO05D000067 4.2e-11 71.2 59 54.2
QL02p025436 Quercus lobata HOM05D000045 ORTHO05D010253 3.6e-10 68.2 65 52.3
Lj6g0001679 Lotus japonicus HOM05D000045 ORTHO05D010736 3.4e-08 61.6 67 46.3
TPR.G29744 Trifolium pratense HOM05D000045 ORTHO05D000067 3.4e-08 61.6 69 44.9
CAN.G1222.2 Capsicum annuum HOM05D000045 ORTHO05D000067 1.7e-07 59.3 52 53.8
TPR.G39595 Trifolium pratense HOM05D000045 ORTHO05D010736 2.2e-07 58.9 63 46.0
Medtr6g051425 Medicago truncatula HOM05D000045 ORTHO05D000067 4.9e-07 57.8 59 45.8
Peaxi162Scf00014g00026 Petunia axillaris HOM05D015170 ORTHO05D000002 1.1e-06 56.6 74 43.2
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 3.1e-06 55.1 58 46.6
Prupe.6G011300 Prunus persica HOM05D000045 ORTHO05D000067 5.4e-06 54.3 56 48.2


User provided reference genes

Program Settings