Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_016239 Vanilla planifolia HOM05D005122 ORTHO05D006057 2.5e-139 498.8 258 100.0
HPP92_016226 Vanilla planifolia HOM05D005122 ORTHO05D006057 5.6e-107 391.3 223 91.0
Aqoxy7G00978 Aquilegia oxysepala HOM05D005122 ORTHO05D006057 5.9e-48 195.3 230 43.0
MBI19_g37996_MAGBIO Magnolia biondii HOM05D005122 ORTHO05D006057 1.3e-47 194.1 211 48.8
Zm00001eb313890 Zea mays HOM05D005122 ORTHO05D006057 1.4e-46 190.7 210 45.2
Os09g0436800 Oryza sativa ssp. japonica HOM05D005122 ORTHO05D006057 2.5e-46 189.9 210 46.7
CDE04G2636 Ceratophyllum demersum HOM05D005122 ORTHO05D006057 9.3e-46 188.0 192 49.5
GSVIVG01015020001 Vitis vinifera HOM05D005122 ORTHO05D006057 2.3e-44 183.3 199 48.7
FAN19G2002 Fragaria x ananassa HOM05D005122 ORTHO05D006057 8.7e-44 181.4 194 49.5
Prupe.7G192500 Prunus persica HOM05D005122 ORTHO05D006057 1.9e-43 180.3 206 48.1
QL11p002844 Quercus lobata HOM05D005122 ORTHO05D006057 1.9e-43 180.3 206 45.1
FvH4_1g09310 Fragaria vesca HOM05D005122 ORTHO05D006057 2.5e-43 179.9 194 49.0
Cfa002940 Carpinus fangiana HOM05D005122 ORTHO05D006057 3.3e-43 179.5 205 46.8
FAN28G0954 Fragaria x ananassa HOM05D005122 ORTHO05D006057 3.3e-43 179.5 194 49.5
Migut.J00884 Erythranthe guttata HOM05D005122 ORTHO05D006057 4.3e-43 179.1 204 45.1
Peaxi162Scf00191g00046 Petunia axillaris HOM05D005122 ORTHO05D006057 5.7e-43 178.7 207 45.9
MSTRG.19429 Avicennia marina HOM05D005122 ORTHO05D006057 7.4e-43 178.3 205 45.4
Nitab4.5_0007169g0020 Nicotiana tabacum HOM05D005122 ORTHO05D006057 7.4e-43 178.3 223 42.6
Ciclev10007237m.g Citrus clementina HOM05D005122 ORTHO05D006057 1.3e-42 177.6 225 43.6
Thecc.09G070600 Theobroma cacao HOM05D005122 ORTHO05D006057 1.3e-42 177.6 204 47.5
EL10Ac8g18978 Beta vulgaris HOM05D005122 ORTHO05D006057 2.2e-42 176.8 221 42.5
Nitab4.5_0000170g0030 Nicotiana tabacum HOM05D005122 ORTHO05D006057 2.8e-42 176.4 223 42.6
MD02G1100300 Malus domestica HOM05D005122 ORTHO05D006057 3.7e-42 176.0 205 49.3
Nn8g38537 Nelumbo nucifera HOM05D005122 ORTHO05D006057 3.7e-42 176.0 223 41.3
Duzib168G0854 Durio zibethinus HOM05D005122 ORTHO05D006057 4.8e-42 175.6 195 48.2
Manes.16G092800 Manihot esculenta HOM05D005122 ORTHO05D006057 4.8e-42 175.6 225 44.0
Cpa.g.sc82.66 Carica papaya HOM05D005122 ORTHO05D006057 8.2e-42 174.9 204 44.1
Lj4A920G55 Lonicera japonica HOM05D005122 ORTHO05D006057 1.1e-41 174.5 209 44.0
RcHm_v2.0_Chr2g0095891 Rosa chinensis HOM05D005122 ORTHO05D006057 1.8e-41 173.7 194 47.9
Rhsim03G0225900 Rhododendron simsii HOM05D005122 ORTHO05D006057 2.4e-41 173.3 200 44.0
Atru.chr7.1763 Acer truncatum HOM05D005122 ORTHO05D006057 3.1e-41 172.9 205 44.4
Hund26106 Selenicereus undatus HOM05D005122 ORTHO05D006057 5.3e-41 172.2 222 43.2
VMungo1215G1386 Vigna mungo HOM05D005122 ORTHO05D006057 6.9e-41 171.8 211 43.1
Sabra06G0107000 Salix brachista HOM05D005122 ORTHO05D006057 2.6e-40 169.9 195 45.1
CAN.G210.4 Capsicum annuum HOM05D005122 ORTHO05D006057 3.4e-40 169.5 207 44.0
PSO104G0049 Papaver somniferum HOM05D005122 ORTHO05D006057 3.4e-40 169.5 205 41.5
PSO421G0465 Papaver somniferum HOM05D005122 ORTHO05D006057 3.4e-40 169.5 205 42.4
PGR142G3115 Punica granatum HOM05D005122 ORTHO05D006057 3.4e-40 169.5 224 40.6
Actinidia39620 Actinidia chinensis HOM05D005122 ORTHO05D006057 4.5e-40 169.1 204 44.6
MD15G1223300 Malus domestica HOM05D005122 ORTHO05D006057 7.7e-40 168.3 200 47.5
TWI34G1091 Tripterygium wilfordii HOM05D005122 ORTHO05D006057 1.0e-39 167.9 200 42.0
vmacro06355 Vaccinium macrocarpon HOM05D005122 ORTHO05D006057 1.0e-39 167.9 190 45.8
Gohir.A05G035900 Gossypium hirsutum HOM05D005122 ORTHO05D006057 1.7e-39 167.2 209 44.5
CiPaw.03G200700 Carya illinoinensis HOM05D005122 ORTHO05D006057 2.2e-39 166.8 212 45.3
Ca_30968_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 2.9e-39 166.4 218 42.2
Medtr4g124670 Medicago truncatula HOM05D005122 ORTHO05D006057 5.0e-39 165.6 216 42.6
Potri.006G136900 Populus trichocarpa HOM05D005122 ORTHO05D006057 6.5e-39 165.2 199 44.7
arahy.Tifrunner.gnm1.ann1.C788P2 Arachis hypogaea HOM05D005122 ORTHO05D006057 8.5e-39 164.9 210 44.8
arahy.Tifrunner.gnm1.ann1.EYQ1XG Arachis hypogaea HOM05D005122 ORTHO05D006057 8.5e-39 164.9 210 44.8
AUR62028313 Chenopodium quinoa HOM05D005122 ORTHO05D006057 8.5e-39 164.9 205 43.4
PGSC0003DMG400013574 Solanum tuberosum HOM05D005122 ORTHO05D006057 8.5e-39 164.9 207 44.9
BcaC04g18854 Brassica carinata HOM05D005122 ORTHO05D006057 1.1e-38 164.5 213 42.3
SalBow6G0425 Salvia bowleyana HOM05D005122 ORTHO05D006057 1.4e-38 164.1 205 42.9
BolC9t58866H Brassica oleracea HOM05D005122 ORTHO05D006057 1.9e-38 163.7 215 40.9
BraA10t44307Z Brassica rapa HOM05D005122 ORTHO05D006057 1.9e-38 163.7 213 40.8
Gohir.D05G037400 Gossypium hirsutum HOM05D005122 ORTHO05D006057 1.9e-38 163.7 209 44.0
Gorai.009G037900 Gossypium raimondii HOM05D005122 ORTHO05D006057 1.9e-38 163.7 209 44.0
CANSAT56G2058 Cannabis sativa HOM05D005122 ORTHO05D006057 2.5e-38 163.3 194 45.4
Glyma.13G113900 Glycine max HOM05D005122 ORTHO05D006057 2.5e-38 163.3 194 43.8
A10p22480 Brassica napus HOM05D005122 ORTHO05D006057 3.2e-38 162.9 204 43.1
DCAR_028528 Daucus carota HOM05D005122 ORTHO05D006057 3.2e-38 162.9 208 44.7
CANSAT56G0085 Cannabis sativa HOM05D005122 ORTHO05D006057 4.2e-38 162.5 194 44.8
AUR62025308 Chenopodium quinoa HOM05D005122 ORTHO05D006057 4.2e-38 162.5 205 42.9
Glyma.17G045900 Glycine max HOM05D005122 ORTHO05D006057 4.2e-38 162.5 194 43.8
Solyc07g042500.4 Solanum lycopersicum HOM05D005122 ORTHO05D006057 4.2e-38 162.5 204 44.6
Rhsim05G0002500 Rhododendron simsii HOM05D005122 ORTHO05D006057 5.5e-38 162.2 203 41.4
AL5G12790 Arabidopsis lyrata HOM05D005122 ORTHO05D006057 7.2e-38 161.8 213 40.8
Haze_26065 Corylus avellana HOM05D005122 ORTHO05D006057 7.2e-38 161.8 218 43.1
AT2G03140 Arabidopsis thaliana HOM05D005122 ORTHO05D006057 9.4e-38 161.4 213 41.3
C09p60330 Brassica napus HOM05D005122 ORTHO05D006057 9.4e-38 161.4 213 41.3
Sopen07g022170 Solanum pennellii HOM05D005122 ORTHO05D006057 9.4e-38 161.4 207 44.4
Aa31LG4G13020 Aethionema arabicum HOM05D005122 ORTHO05D006057 1.6e-37 160.6 213 40.8
Carub.0005s0197 Capsella rubella HOM05D005122 ORTHO05D006057 2.1e-37 160.2 213 40.4
Phvul.003G127600 Phaseolus vulgaris HOM05D005122 ORTHO05D006057 2.7e-37 159.8 208 42.3
CSS0025527 Camellia sinensis var. sinensis HOM05D005122 ORTHO05D006057 3.6e-37 159.5 205 43.4
Lalb_Chr13g0299211 Lupinus albus HOM05D005122 ORTHO05D006057 3.6e-37 159.5 210 41.9
ATR0681G090 Amborella trichopoda HOM05D005122 ORTHO05D006057 6.1e-37 158.7 190 45.8
Thhalv10012418m.g Eutrema salsugineum HOM05D005122 ORTHO05D006057 6.1e-37 158.7 213 40.8
Sp6g27400 Schrenkiella parvula HOM05D005122 ORTHO05D006057 7.9e-37 158.3 213 41.3
TPR.G12583 Trifolium pratense HOM05D005122 ORTHO05D006057 7.9e-37 158.3 208 41.3
Cc06_g12660 Coffea canephora HOM05D005122 ORTHO05D006057 2.3e-36 156.8 194 44.3
Lj4g0009327 Lotus japonicus HOM05D005122 ORTHO05D006057 3.9e-36 156.0 213 40.8
ECA234G0156 Erigeron canadensis HOM05D005122 ORTHO05D006057 7.4e-35 151.8 194 40.2
ClCG11G000010 Citrullus lanatus HOM05D005122 ORTHO05D006057 7.7e-32 141.7 233 35.6
HanXRQChr10g0319771 Helianthus annuus HOM05D005122 ORTHO05D006057 1.7e-31 140.6 211 37.4
MELO3C022901.2 Cucumis melo HOM05D005122 ORTHO05D006057 3.2e-30 136.3 220 35.9
Sed0023749 Sechium edule HOM05D005122 ORTHO05D006057 1.6e-29 134.0 238 34.0
Lsat_1_v5_gn_5_139061 Lactuca sativa HOM05D005122 ORTHO05D006057 7.9e-29 131.7 189 38.1
SEGI_27630 Sequoiadendron giganteum HOM05D005122 ORTHO05D006057 6.7e-28 128.6 215 33.5
Dinv42429 Davidia involucrata HOM05D005122 ORTHO05D006057 2.4e-25 120.2 129 45.0
arahy.Tifrunner.gnm1.ann1.T9PSLR Arachis hypogaea HOM05D005122 ORTHO05D006057 5.3e-25 119.0 197 37.6
Ah.14g084680 Amaranthus hybridus HOM05D005122 ORTHO05D006057 7.0e-25 118.6 192 37.5
AagrBONN_evm.TU.Sc2ySwM_362.1932 Anthoceros agrestis HOM05D005122 ORTHO05D006057 9.1e-25 118.2 202 31.7
COL.COLO4_21211 Corchorus olitorius HOM05D005122 ORTHO05D006057 3.5e-24 116.3 165 43.0
TAR624G1119 Trochodendron aralioides HOM05D005122 ORTHO05D006057 4.5e-24 115.9 122 52.5
Mapoly0027s0173 Marchantia polymorpha HOM05D005122 ORTHO05D006057 3.8e-23 112.8 195 35.4
CBR_g48436 Chara braunii HOM05D000019 ORTHO05D000048 9.4e-22 108.2 211 29.4
unitig_27.g24782 Utricularia gibba HOM05D005122 ORTHO05D006057 1.2e-21 107.8 123 45.5
SGA_v2.0_scaffold31G12693 Striga asiatica HOM05D005122 ORTHO05D006057 1.6e-21 107.5 135 45.2
Eucgr.I00075 Eucalyptus grandis HOM05D005122 ORTHO05D006057 4.7e-21 105.9 142 40.8
Pp3c18_16020 Physcomitrium patens HOM05D005122 ORTHO05D006057 1.0e-20 104.8 192 31.2
Psat4g019280 Pisum sativum HOM05D005122 ORTHO05D006057 9.1e-17 91.7 131 42.0
Ca_21337_v3 Cicer arietinum L. HOM05D005122 ORTHO05D006057 7.7e-16 88.6 122 43.4
SMO228G0085 Selaginella moellendorffii HOM05D005122 ORTHO05D006057 5.0e-15 85.9 153 32.7
Oeu028111.1 Olea europaea HOM05D005122 ORTHO05D006057 2.5e-14 83.6 103 43.7
Sc08g0009130 Simmondsia chinensis HOM05D005122 ORTHO05D006057 4.7e-13 79.3 111 45.0
CARHR289930 Cardamine hirsuta HOM05D005122 ORTHO05D006057 4.0e-12 76.3 98 34.7
PRCOL_00005095 Prasinoderma coloniale HOM05D005122 ORTHO05D006057 2.0e-08 63.9 84 40.5
Actinidia30254 Actinidia chinensis HOM05D005122 ORTHO05D006057 2.7e-08 63.5 125 33.6
arahy.Tifrunner.gnm1.ann1.UG5RRW Arachis hypogaea HOM05D005122 ORTHO05D006057 1.0e-07 61.6 174 32.2


User provided reference genes

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