Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015997 Vanilla planifolia HOM05D006926 ORTHO05D008863 1.8e-127 460.3 471 100.0
Cpa.g.sc16.177 Carica papaya HOM05D006926 ORTHO05D008863 5.3e-31 139.8 127 51.2
FvH4_4g18230 Fragaria vesca HOM05D006926 ORTHO05D008863 2.6e-30 137.5 131 51.1
FAN12G2558 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.6e-30 137.5 131 51.1
FAN12G4333 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.6e-30 137.5 131 51.1
FAN17G0573 Fragaria x ananassa HOM05D006926 ORTHO05D008863 2.6e-30 137.5 131 51.1
Gohir.A09G238600 Gossypium hirsutum HOM05D006926 ORTHO05D008863 3.5e-30 137.1 131 48.9
Gohir.D09G239500 Gossypium hirsutum HOM05D006926 ORTHO05D008863 3.5e-30 137.1 131 48.9
Gorai.006G262300 Gossypium raimondii HOM05D006926 ORTHO05D008863 3.5e-30 137.1 131 48.9
MBI01_g30450_MAGBIO Magnolia biondii HOM05D006926 ORTHO05D008863 1.0e-29 135.6 150 45.3
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 1.0e-29 135.6 131 48.9
COL.COLO4_13863 Corchorus olitorius HOM05D006926 ORTHO05D008863 1.3e-29 135.2 180 41.7
Rhsim04G0222900 Rhododendron simsii HOM05D006926 ORTHO05D008863 1.7e-29 134.8 131 48.1
Sp3g05870 Schrenkiella parvula HOM05D006926 ORTHO05D008863 8.5e-29 132.5 127 48.8
vmacro08158 Vaccinium macrocarpon HOM05D006926 ORTHO05D008863 1.1e-28 132.1 127 48.8
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 1.5e-28 131.7 131 46.6
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 1.9e-28 131.3 131 49.6
RcHm_v2.0_Chr4g0422371 Rosa chinensis HOM05D006926 ORTHO05D008863 2.5e-28 131.0 131 49.6
ClCG05G006130 Citrullus lanatus HOM05D006926 ORTHO05D008863 3.2e-28 130.6 127 47.2
Actinidia40273 Actinidia chinensis HOM05D006926 ORTHO05D008863 4.2e-28 130.2 127 49.6
Thecc.04G285300 Theobroma cacao HOM05D006926 ORTHO05D008863 4.2e-28 130.2 152 44.7
AL159U10010 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 5.5e-28 129.8 127 47.2
AT3G06920 Arabidopsis thaliana HOM05D006926 ORTHO05D008863 5.5e-28 129.8 128 46.9
Duzib151G0724 Durio zibethinus HOM05D006926 ORTHO05D008863 7.2e-28 129.4 131 47.3
TAR365G0466 Trochodendron aralioides HOM05D006926 ORTHO05D008863 7.2e-28 129.4 127 49.6
HanXRQChr05g0150001 Helianthus annuus HOM05D006926 ORTHO05D008863 9.4e-28 129.0 127 48.0
CARHR081530 Cardamine hirsuta HOM05D006926 ORTHO05D008863 1.2e-27 128.6 127 48.0
ECA233G5048 Erigeron canadensis HOM05D006926 ORTHO05D008863 1.2e-27 128.6 127 48.0
Thhalv10020026m.g Eutrema salsugineum HOM05D006926 ORTHO05D008863 1.2e-27 128.6 127 47.2
AL3G18040 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.6e-27 128.3 127 47.2
AL3G18070 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.6e-27 128.3 127 47.2
AL3G18090 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.6e-27 128.3 127 47.2
BolC3t16524H Brassica oleracea HOM05D006926 ORTHO05D008863 1.6e-27 128.3 160 40.6
CSS0040550 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 2.1e-27 127.9 127 46.5
Sed0000576 Sechium edule HOM05D006926 ORTHO05D008863 2.1e-27 127.9 127 46.5
Aa31LG5G17490 Aethionema arabicum HOM05D006926 ORTHO05D008863 2.7e-27 127.5 125 48.8
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 3.6e-27 127.1 131 49.6
Lj9C380T3 Lonicera japonica HOM05D006926 ORTHO05D008863 4.7e-27 126.7 127 48.0
Manes.03G195800 Manihot esculenta HOM05D006926 ORTHO05D008863 6.1e-27 126.3 131 45.8
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 8.0e-27 125.9 131 45.0
C03p42540 Brassica napus HOM05D006926 ORTHO05D008863 1.0e-26 125.6 168 40.5
Prupe.1G135500 Prunus persica HOM05D006926 ORTHO05D008863 1.0e-26 125.6 131 45.8
Cfa015391 Carpinus fangiana HOM05D006926 ORTHO05D008863 1.4e-26 125.2 131 44.3
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 1.4e-26 125.2 131 48.1
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 2.3e-26 124.4 128 48.4
THA.LOC104827343 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 2.3e-26 124.4 127 46.5
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 3.0e-26 124.0 128 48.4
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 3.9e-26 123.6 140 42.9
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 6.7e-26 122.9 131 47.3
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 6.7e-26 122.9 128 48.4
DCAR_006643 Daucus carota HOM05D006926 ORTHO05D008863 8.8e-26 122.5 127 44.9
MD08G1066700 Malus domestica HOM05D006926 ORTHO05D008863 8.8e-26 122.5 131 45.0
Oeu029705.1 Olea europaea HOM05D006926 ORTHO05D008863 1.1e-25 122.1 144 45.8
A03p34960 Brassica napus HOM05D006926 ORTHO05D008863 1.5e-25 121.7 163 40.5
CsaV3_3G014680 Cucumis sativus L. HOM05D006926 ORTHO05D008863 1.5e-25 121.7 126 43.7
BraA03t12676Z Brassica rapa HOM05D006926 ORTHO05D008863 2.0e-25 121.3 162 40.7
EL10Ac1g01925 Beta vulgaris HOM05D006926 ORTHO05D008863 3.3e-25 120.6 129 44.2
Atru.chr4.2848 Acer truncatum HOM05D006926 ORTHO05D008863 5.7e-25 119.8 151 42.4
Glyma.02G298900 Glycine max HOM05D006926 ORTHO05D008863 9.7e-25 119.0 117 45.3
Nn2g14325 Nelumbo nucifera HOM05D006926 ORTHO05D008863 9.7e-25 119.0 164 40.2
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 1.3e-24 118.6 148 41.2
THA.LOC104818923 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 1.3e-24 118.6 127 44.1
Potri.010G014100 Populus trichocarpa HOM05D006926 ORTHO05D008863 1.7e-24 118.2 131 44.3
Lalb_Chr17g0348851 Lupinus albus HOM05D006926 ORTHO05D008863 2.8e-24 117.5 128 40.6
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 3.7e-24 117.1 127 43.3
CSS0048032 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 3.7e-24 117.1 160 39.4
Nn6g34671 Nelumbo nucifera HOM05D006926 ORTHO05D008863 6.3e-24 116.3 126 46.8
Sabra10G0009000 Salix brachista HOM05D006926 ORTHO05D008863 6.3e-24 116.3 131 45.0
Hund12224 Selenicereus undatus HOM05D006926 ORTHO05D008863 3.1e-23 114.0 127 40.9
Cc01_g06580 Coffea canephora HOM05D006926 ORTHO05D008863 4.1e-23 113.6 130 41.5
PSO302G0177 Papaver somniferum HOM05D006926 ORTHO05D008863 4.1e-23 113.6 173 39.9
Psat2g008440 Pisum sativum HOM05D006926 ORTHO05D008863 4.1e-23 113.6 125 43.2
MSTRG.10097 Avicennia marina HOM05D006926 ORTHO05D008863 5.3e-23 113.2 127 45.7
Cc00_g07570 Coffea canephora HOM05D006926 ORTHO05D008863 9.1e-23 112.5 130 41.5
Ca_06384_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 1.2e-22 112.1 128 43.0
Ca_29965_v3 Cicer arietinum L. HOM05D006926 ORTHO05D008863 1.2e-22 112.1 128 43.0
LjContig00081g0009495 Lotus japonicus HOM05D006926 ORTHO05D008863 1.2e-22 112.1 117 45.3
AUR62040613 Chenopodium quinoa HOM05D006926 ORTHO05D008863 1.6e-22 111.7 128 40.6
Aqoxy5G00729 Aquilegia oxysepala HOM05D004412 ORTHO05D005316 2.0e-22 111.3 164 38.4
ATR0796G196 Amborella trichopoda HOM05D006926 ORTHO05D008863 2.6e-22 110.9 126 42.9
AUR62035127 Chenopodium quinoa HOM05D006926 ORTHO05D008863 2.6e-22 110.9 128 40.6
SHI00269 Sapria himalayana HOM05D006926 ORTHO05D008863 2.6e-22 110.9 125 41.6
VMungo0647G0525 Vigna mungo HOM05D006926 ORTHO05D008863 2.6e-22 110.9 128 41.4
Phvul.008G277600 Phaseolus vulgaris HOM05D006926 ORTHO05D008863 3.5e-22 110.5 111 45.0
Sc10g0006430 Simmondsia chinensis HOM05D006926 ORTHO05D008863 5.9e-22 109.8 128 43.0
CiPaw.01G148200 Carya illinoinensis HOM05D006926 ORTHO05D008863 1.3e-21 108.6 114 44.7
SalBow1G7679 Salvia bowleyana HOM05D006926 ORTHO05D008863 2.2e-21 107.8 127 41.7
arahy.Tifrunner.gnm1.ann1.R7Y0VJ Arachis hypogaea HOM05D006926 ORTHO05D008863 2.9e-21 107.5 131 39.7
arahy.Tifrunner.gnm1.ann1.DI2NU4 Arachis hypogaea HOM05D006926 ORTHO05D008863 3.8e-21 107.1 128 40.6
CDE11G0294 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 3.8e-21 107.1 128 42.2
PGR031G3585 Punica granatum HOM05D006926 ORTHO05D008863 3.8e-21 107.1 127 40.2
Lalb_Chr10g0107371 Lupinus albus HOM05D006926 ORTHO05D008863 5.0e-21 106.7 127 41.7
TPR.G14143 Trifolium pratense HOM05D006926 ORTHO05D008863 6.5e-21 106.3 129 39.5
TPR.G14145 Trifolium pratense HOM05D006926 ORTHO05D008863 1.1e-20 105.5 128 39.1
Nn1g09562 Nelumbo nucifera HOM05D006926 ORTHO05D008863 1.9e-20 104.8 128 41.4
Medtr5g095130 Medicago truncatula HOM05D006926 ORTHO05D008863 5.5e-20 103.2 128 38.3
SGA_v2.0_scaffold67G22630 Striga asiatica HOM05D006926 ORTHO05D008863 6.8e-18 96.3 114 41.2
CDE01G0787 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 2.2e-16 91.3 127 37.8
Eucgr.B01739 Eucalyptus grandis HOM05D006926 ORTHO05D008863 1.3e-13 82.0 82 47.6
Prupe.1G322900 Prunus persica HOM05D000424 ORTHO05D000355 7.5e-09 66.2 227 26.4
Eucgr.C02193 Eucalyptus grandis HOM05D006926 ORTHO05D008863 9.8e-09 65.9 117 34.2
Thecc.05G108600 Theobroma cacao HOM05D006596 ORTHO05D008497 4.9e-08 63.5 134 27.6
Dinv26449 Davidia involucrata HOM05D006926 ORTHO05D008863 2.4e-07 61.2 55 50.9
Phvul.007G037500 Phaseolus vulgaris HOM05D000424 ORTHO05D000355 7.0e-07 59.7 129 28.7
Glyma.10G264500 Glycine max HOM05D000424 ORTHO05D000355 1.6e-06 58.5 127 29.1
Manes.01G227300 Manihot esculenta HOM05D000424 ORTHO05D002854 2.0e-06 58.2 163 27.6


User provided reference genes

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