Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.4e-184 647.9 345 100.0
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 8.6e-180 633.6 345 98.3
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.3e-42 177.9 383 40.5
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.5e-38 164.5 379 37.5
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 2.4e-36 157.1 351 37.0
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 4.5e-35 152.9 347 38.3
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 5.8e-35 152.5 412 36.2
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 5.8e-35 152.5 345 38.6
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 1.7e-34 151.0 367 38.1
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 2.9e-34 150.2 345 38.6
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 7.1e-33 145.6 371 36.1
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 2.7e-32 143.7 354 36.7
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.5e-32 143.3 350 37.4
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 6.0e-32 142.5 354 35.0
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.0e-31 141.7 364 36.8
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.8e-31 141.0 372 38.4
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 1.8e-31 141.0 348 36.2
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 3.9e-31 139.8 360 35.6
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 5.1e-31 139.4 378 36.5
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 6.7e-31 139.0 346 35.5
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 3.3e-30 136.7 354 35.6
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 5.6e-30 136.0 365 33.2
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 7.4e-30 135.6 361 34.3
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 9.6e-30 135.2 365 34.2
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 9.6e-30 135.2 367 35.7
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 1.6e-29 134.4 363 37.2
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 2.8e-29 133.7 370 35.4
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 1.1e-28 131.7 374 33.7
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.4e-28 131.3 347 36.3
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.4e-28 131.3 367 35.4
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 3.1e-28 130.2 348 37.4
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 3.1e-28 130.2 361 35.5
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 4.0e-28 129.8 344 36.3
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 5.3e-28 129.4 364 34.9
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 5.3e-28 129.4 362 35.1
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.2e-27 128.3 357 37.3
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 1.5e-27 127.9 366 36.3
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 2.0e-27 127.5 364 35.2
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 5.8e-27 125.9 368 34.8
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 5.8e-27 125.9 362 35.6
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.8e-27 125.9 365 34.5
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 9.9e-27 125.2 367 34.3
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.3e-26 124.8 358 37.2
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 6.4e-26 122.5 289 36.7
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 6.4e-26 122.5 349 35.5
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 1.9e-25 120.9 307 35.8
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 1.9e-25 120.9 398 34.7
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.2e-24 118.2 350 33.4
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 1.2e-24 118.2 353 34.8
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.6e-24 117.9 362 34.8
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.6e-24 117.9 344 32.8
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.1e-24 117.5 358 36.3
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 2.1e-24 117.5 363 33.6
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 2.1e-24 117.5 344 32.8
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.7e-24 117.1 366 32.8
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 7.9e-24 115.5 401 33.4
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 7.9e-24 115.5 380 31.8
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 2.3e-23 114.0 442 32.4
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 5.1e-23 112.8 347 33.4
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 8.7e-23 112.1 359 34.3
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.1e-22 111.7 344 31.7
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 1.1e-22 111.7 351 31.9
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.9e-22 110.9 357 34.2
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 2.5e-22 110.5 358 33.2
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 9.6e-22 108.6 292 35.3
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 1.6e-21 107.8 285 35.1
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.1e-21 107.5 343 31.2
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 2.8e-21 107.1 346 31.2
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 4.8e-21 106.3 353 35.1
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.1e-20 105.1 369 32.0
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.4e-20 104.8 360 31.4
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 3.1e-20 103.6 361 31.6
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 3.1e-20 103.6 349 32.7
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 2.6e-19 100.5 402 29.4
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 2.6e-19 100.5 339 31.0
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 3.4e-19 100.1 294 34.4
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 7.6e-19 99.0 370 31.4
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 7.6e-19 99.0 277 32.1
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 2.9e-18 97.1 352 33.2
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 2.9e-18 97.1 352 33.2
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 8.4e-18 95.5 365 30.4
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 8.4e-18 95.5 361 31.6
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.1e-17 95.1 358 31.8
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.1e-17 95.1 358 31.8
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 1.4e-17 94.7 245 32.2
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 1.9e-17 94.4 362 31.2
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 2.5e-17 94.0 349 33.0
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 2.5e-17 94.0 348 33.0
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 2.5e-17 94.0 310 32.9
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 7.1e-17 92.4 346 31.5
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 7.1e-17 92.4 350 31.1
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 1.6e-16 91.3 352 31.8
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 5.1e-15 86.3 456 28.9
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 6.7e-15 85.9 233 36.5
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 1.5e-14 84.7 341 32.6
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 1.9e-14 84.3 356 30.3
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.8e-12 77.8 302 29.1
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.3e-10 71.6 118 40.7
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-10 71.2 78 50.0
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-10 71.2 49 73.5
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 5.0e-10 69.7 125 40.0
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.0e-10 69.7 126 37.3
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 8.5e-10 68.9 56 58.9
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.5e-10 68.9 110 40.9
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 1.1e-09 68.6 351 26.8
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-09 68.6 136 36.8
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 3.2e-09 67.0 52 59.6
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-09 67.0 136 37.5
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-09 67.0 136 37.5
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-09 67.0 136 35.3
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 7.2e-09 65.9 383 27.9
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.3e-09 65.5 134 37.3
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 2.1e-08 64.3 50 62.0
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 3.6e-08 63.5 131 35.1
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 4.6e-08 63.2 364 28.3
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 2.5e-06 57.4 210 27.1
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 4.3e-06 56.6 122 32.8


User provided reference genes

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