Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.6e-95 352.1 176 100.0
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.0e-47 193.0 228 55.7
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 9.9e-23 110.9 61 75.4
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.7e-22 110.2 58 79.3
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 4.9e-22 108.6 87 60.9
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 8.4e-22 107.8 84 60.7
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.1e-21 107.5 87 59.8
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.1e-21 107.5 61 72.1
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.1e-21 107.5 58 81.0
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.4e-21 107.1 68 66.2
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.4e-21 107.1 61 73.8
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.4e-21 107.1 68 66.2
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.9e-21 106.7 61 78.7
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.9e-21 106.7 58 77.6
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.9e-21 106.7 58 77.6
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 1.9e-21 106.7 58 77.6
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 2.4e-21 106.3 69 68.1
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 3.2e-21 105.9 63 71.4
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 3.2e-21 105.9 58 79.3
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.2e-21 105.9 58 81.0
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 3.2e-21 105.9 58 79.3
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 4.2e-21 105.5 58 77.6
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 4.2e-21 105.5 78 59.0
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 4.2e-21 105.5 58 75.9
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.4e-21 105.1 63 68.3
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 5.4e-21 105.1 68 63.2
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 5.4e-21 105.1 58 77.6
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 5.4e-21 105.1 61 70.5
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 5.4e-21 105.1 58 75.9
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 7.1e-21 104.8 68 63.2
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 7.1e-21 104.8 68 63.2
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 7.1e-21 104.8 68 63.2
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 7.1e-21 104.8 68 63.2
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 7.1e-21 104.8 68 63.2
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 7.1e-21 104.8 58 72.4
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 9.3e-21 104.4 68 63.2
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.2e-20 104.0 68 61.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.2e-20 104.0 68 66.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.2e-20 104.0 68 66.2
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.2e-20 104.0 58 77.6
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 2.1e-20 103.2 70 67.1
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 2.1e-20 103.2 68 61.8
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 2.1e-20 103.2 69 66.7
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.7e-20 102.8 58 79.3
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.7e-20 102.8 61 72.1
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 2.7e-20 102.8 69 66.7
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 3.5e-20 102.4 87 55.2
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 3.5e-20 102.4 87 55.2
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 3.5e-20 102.4 58 75.9
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.6e-20 102.1 63 66.7
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 4.6e-20 102.1 58 75.9
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 4.6e-20 102.1 239 30.5
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 4.6e-20 102.1 239 30.5
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 4.6e-20 102.1 87 52.9
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 4.6e-20 102.1 58 74.1
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 6.0e-20 101.7 58 74.1
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 6.0e-20 101.7 69 65.2
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 1.0e-19 100.9 58 69.0
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.0e-19 100.9 58 69.0
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.0e-19 100.9 58 74.1
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-19 100.9 69 65.2
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 1.0e-19 100.9 58 74.1
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.0e-19 100.9 58 72.4
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.3e-19 100.5 58 74.1
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.3e-19 100.5 58 74.1
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.7e-19 100.1 58 75.9
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 1.7e-19 100.1 60 71.7
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.3e-19 99.8 58 70.7
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.3e-19 99.8 69 65.2
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 2.3e-19 99.8 58 72.4
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.0e-19 99.4 58 67.2
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.0e-19 99.4 58 70.7
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 3.0e-19 99.4 58 70.7
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 3.0e-19 99.4 58 72.4
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.9e-19 99.0 58 74.1
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.9e-19 99.0 58 74.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.9e-19 99.0 58 74.1
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 3.9e-19 99.0 169 36.1
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.9e-19 99.0 85 54.1
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 5.1e-19 98.6 58 72.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 6.6e-19 98.2 70 62.9
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 8.7e-19 97.8 69 62.3
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 8.7e-19 97.8 58 72.4
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.1e-18 97.4 58 70.7
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.1e-18 97.4 58 70.7
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.1e-18 97.4 58 70.7
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.5e-18 97.1 58 74.1
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.5e-18 97.1 58 70.7
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.5e-18 97.1 58 70.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.5e-18 97.1 58 69.0
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.9e-18 96.7 58 72.4
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.9e-18 96.7 58 69.0
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.5e-18 96.3 58 70.7
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 2.5e-18 96.3 58 67.2
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.5e-18 96.3 58 70.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.5e-18 96.3 58 74.1
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.3e-18 95.9 58 69.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 4.3e-18 95.5 58 69.0
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.3e-17 94.0 58 67.2
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 3.6e-17 92.4 58 65.5
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.8e-17 92.0 56 64.3
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 7.6e-15 84.7 42 83.3
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 7.1e-13 78.2 41 73.2
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 5.6e-10 68.6 47 57.4
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.1e-09 66.6 49 59.2
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 6.9e-08 61.6 48 50.0
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 6.9e-08 61.6 48 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 2.2e-06 56.6 48 52.1


User provided reference genes

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