Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 3.6e-67 258.1 126 100.0
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 5.7e-57 224.2 122 83.6
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 7.5e-57 223.8 122 83.6
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 1.3e-56 223.0 126 83.3
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 2.2e-56 222.2 125 84.0
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.2e-56 222.2 126 82.5
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.9e-56 221.9 126 81.0
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 3.7e-56 221.5 125 80.0
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 3.7e-56 221.5 125 80.8
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 4.9e-56 221.1 124 80.6
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 4.9e-56 221.1 124 80.6
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 4.9e-56 221.1 124 81.5
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 4.9e-56 221.1 125 80.0
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.3e-56 220.3 126 79.4
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 8.3e-56 220.3 124 83.1
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 8.3e-56 220.3 126 80.2
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 8.3e-56 220.3 125 81.6
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 8.3e-56 220.3 125 80.8
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.1e-55 219.9 120 84.2
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.1e-55 219.9 120 84.2
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 1.1e-55 219.9 126 80.2
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 79.4
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 80.5
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 80.5
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 80.5
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 80.5
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 80.2
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 81.0
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 81.3
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 1.4e-55 219.5 126 81.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.4e-55 219.5 124 81.5
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 1.4e-55 219.5 123 80.5
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.4e-55 219.5 124 81.5
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 1.8e-55 219.2 125 80.0
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.8e-55 219.2 126 80.2
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 1.8e-55 219.2 126 81.0
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 2.4e-55 218.8 124 80.6
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 2.4e-55 218.8 126 80.2
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 3.2e-55 218.4 124 79.8
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 3.2e-55 218.4 124 83.9
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 3.2e-55 218.4 122 81.1
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.2e-55 218.4 122 81.1
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 3.2e-55 218.4 122 81.1
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.1e-55 218.0 123 80.5
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 4.1e-55 218.0 122 79.5
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 5.4e-55 217.6 122 80.3
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 5.4e-55 217.6 126 79.4
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.4e-55 217.6 126 78.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 7.0e-55 217.2 126 78.6
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 7.0e-55 217.2 126 78.6
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 7.0e-55 217.2 123 79.7
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 7.0e-55 217.2 122 80.3
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 7.0e-55 217.2 126 80.2
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 9.2e-55 216.9 122 81.1
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 9.2e-55 216.9 123 80.5
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 1.2e-54 216.5 126 81.7
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-54 216.5 126 81.7
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-54 216.5 126 81.7
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-54 216.5 126 81.7
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 1.2e-54 216.5 126 81.7
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 1.2e-54 216.5 124 82.3
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 1.6e-54 216.1 122 79.5
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.6e-54 216.1 126 77.8
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 2.0e-54 215.7 126 80.2
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.0e-54 215.7 124 79.8
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 2.0e-54 215.7 123 80.5
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 2.7e-54 215.3 124 82.3
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 79.4
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 80.2
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 3.5e-54 214.9 123 79.7
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.5e-54 214.9 123 78.0
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 3.5e-54 214.9 126 77.8
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 79.7
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.6e-54 214.5 123 77.2
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 5.9e-54 214.2 126 77.8
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 5.9e-54 214.2 123 78.0
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 5.9e-54 214.2 126 81.0
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 5.9e-54 214.2 126 78.6
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 7.8e-54 213.8 123 81.3
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 7.8e-54 213.8 126 78.6
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.0e-53 213.4 123 78.9
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.3e-53 213.0 124 77.4
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.3e-53 213.0 126 78.6
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.7e-53 212.6 123 78.9
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 1.7e-53 212.6 121 82.6
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 1.7e-53 212.6 121 81.0
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 2.3e-53 212.2 123 80.5
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 2.9e-53 211.8 123 79.7
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 2.9e-53 211.8 124 76.6
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 2.9e-53 211.8 121 81.0
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 2.9e-53 211.8 123 77.2
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 2.9e-53 211.8 123 79.7
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 3.9e-53 211.5 122 77.0
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.9e-53 211.5 124 76.6
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 3.9e-53 211.5 124 81.5
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 3.9e-53 211.5 122 78.7
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 5.0e-53 211.1 123 78.0
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 5.0e-53 211.1 122 81.1
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 5.0e-53 211.1 126 77.0
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.0e-53 211.1 124 76.6
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 5.0e-53 211.1 123 81.3
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.0e-53 211.1 123 78.9
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 5.0e-53 211.1 125 77.6
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 121 79.3
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 6.6e-53 210.7 120 80.8
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 6.6e-53 210.7 124 76.6
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 122 79.5
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 6.6e-53 210.7 119 81.5
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 6.6e-53 210.7 123 77.2
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 6.6e-53 210.7 122 77.9
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 1.9e-52 209.1 122 80.3
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 3.3e-52 208.4 120 79.2
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 3.3e-52 208.4 123 77.2
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 4.3e-52 208.0 124 75.8
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 4.3e-52 208.0 120 80.8
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 2.1e-51 205.7 124 75.8
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.0e-51 203.8 114 80.7
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 6.8e-50 200.7 122 75.4
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.5e-49 199.5 123 76.4
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.5e-49 199.5 124 74.2
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 9.8e-49 196.8 114 76.3
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.2e-47 191.8 108 82.4
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 3.2e-47 191.8 103 84.5
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 4.1e-47 191.4 106 81.1
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 5.4e-47 191.0 116 77.6
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 2.7e-46 188.7 119 74.8
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 4.6e-46 188.0 125 70.4
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.6e-46 188.0 106 80.2
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 6.0e-46 187.6 108 79.6
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 1.7e-45 186.0 106 82.1
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 3.0e-45 185.3 114 76.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 3.9e-45 184.9 123 71.5
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.0e-45 184.5 109 79.8
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 5.6e-44 181.0 121 72.7
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.2e-41 173.3 100 81.0
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 2.0e-41 172.6 121 62.8
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.4e-41 171.4 108 75.9
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 4.4e-41 171.4 98 79.6
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 7.5e-41 170.6 90 87.8
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.7e-40 169.5 119 65.5
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 2.9e-40 168.7 129 65.9
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 2.4e-39 165.6 124 60.5
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 5.4e-39 164.5 126 60.3
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 7.1e-39 164.1 128 67.2
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 2.7e-38 162.2 101 77.2
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 3.0e-37 158.7 97 76.3
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.6e-36 154.5 88 78.4
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 1.4e-34 149.8 101 68.3
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 8.4e-32 140.6 119 55.5
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 5.4e-31 137.9 124 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 3.5e-30 135.2 121 52.9
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.6e-30 134.8 69 87.0
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.3e-24 116.7 57 89.5
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.4e-23 112.5 108 51.9
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 9.3e-23 110.5 82 57.3
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 1.6e-22 109.8 114 50.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 1.7e-21 106.3 79 57.0
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 2.3e-21 105.9 129 45.0
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 3.9e-21 105.1 113 46.9
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 6.2e-19 97.8 61 75.4
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.6e-14 81.6 47 78.7
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 3.1e-10 68.9 35 88.6
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 3.4e-09 65.5 35 80.0
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 9.3e-07 57.4 32 75.0
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 3.5e-06 55.5 32 75.0


User provided reference genes

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