Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015545 Vanilla planifolia HOM05D000206 ORTHO05D428494 2.3e-75 285.4 139 100.0
HPP92_015476 Vanilla planifolia HOM05D000206 ORTHO05D002004 1.7e-17 93.2 160 43.8
TAR625G1008 Trochodendron aralioides HOM05D000206 ORTHO05D002004 2.4e-08 62.8 40 72.5
CSS0029347 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 7.1e-08 61.2 40 70.0
CSS0039676 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 7.1e-08 61.2 40 70.0
CSS0029177 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 1.6e-07 60.1 40 67.5
CSS0035905 Camellia sinensis var. sinensis HOM05D000206 ORTHO05D002004 1.6e-07 60.1 40 70.0
MD02G1107000 Malus domestica HOM05D000206 ORTHO05D002004 1.6e-07 60.1 40 72.5
FvH4_1g09830 Fragaria vesca HOM05D000206 ORTHO05D002004 3.5e-07 58.9 40 72.5
FAN19G2057 Fragaria x ananassa HOM05D000206 ORTHO05D002004 3.5e-07 58.9 40 72.5
FAN23G2866 Fragaria x ananassa HOM05D000206 ORTHO05D002004 3.5e-07 58.9 40 72.5
FAN28G1713 Fragaria x ananassa HOM05D000206 ORTHO05D002004 3.5e-07 58.9 40 72.5
Cfa020813 Carpinus fangiana HOM05D000206 ORTHO05D002004 4.6e-07 58.5 132 34.8
FAN23G2017 Fragaria x ananassa HOM05D000206 ORTHO05D002004 4.6e-07 58.5 40 72.5
FAN26G1064 Fragaria x ananassa HOM05D000206 ORTHO05D002004 4.6e-07 58.5 40 72.5
MBI04_g23907_MAGBIO Magnolia biondii HOM05D000206 ORTHO05D002004 4.6e-07 58.5 40 70.0
MBI04_g44705_MAGBIO Magnolia biondii HOM05D000206 ORTHO05D002004 4.6e-07 58.5 40 70.0
GSVIVG01026415001 Vitis vinifera HOM05D000206 ORTHO05D002004 4.6e-07 58.5 39 69.2
Nn5g31079 Nelumbo nucifera HOM05D000206 ORTHO05D002004 6.0e-07 58.2 52 53.8
MBI04_g23908_MAGBIO Magnolia biondii HOM05D000206 ORTHO05D002004 7.9e-07 57.8 40 67.5
MBI04_g44706_MAGBIO Magnolia biondii HOM05D000206 ORTHO05D002004 7.9e-07 57.8 40 67.5
Potri.001G455400 Populus trichocarpa HOM05D000206 ORTHO05D002004 7.9e-07 57.8 40 65.0
RcHm_v2.0_Chr6g0310881 Rosa chinensis HOM05D000206 ORTHO05D002004 7.9e-07 57.8 40 70.0
ECA238G4205 Erigeron canadensis HOM05D000206 ORTHO05D002004 1.0e-06 57.4 39 71.8
MD02G1106500 Malus domestica HOM05D000206 ORTHO05D002004 1.0e-06 57.4 39 71.8
Manes.01G158700 Manihot esculenta HOM05D000206 ORTHO05D002004 1.0e-06 57.4 39 69.2
Potri.011G146600 Populus trichocarpa HOM05D000206 ORTHO05D002004 1.0e-06 57.4 39 71.8
TAR376G0595 Trochodendron aralioides HOM05D000206 ORTHO05D002004 1.0e-06 57.4 39 71.8
Atru.chr3.4 Acer truncatum HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 69.2
Actinidia35694 Actinidia chinensis HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 69.2
COL.COLO4_24532 Corchorus olitorius HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 66.7
Dinv28286 Davidia involucrata HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 66.7
Migut.K00869 Erythranthe guttata HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 69.2
Gohir.A07G183700 Gossypium hirsutum HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 66.7
Gohir.D07G190400 Gossypium hirsutum HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 66.7
Gorai.001G212500 Gossypium raimondii HOM05D000206 ORTHO05D002004 1.3e-06 57.0 39 66.7
CDE04G0080 Ceratophyllum demersum HOM05D000206 ORTHO05D002004 1.7e-06 56.6 40 65.0
Dinv19109 Davidia involucrata HOM05D000206 ORTHO05D002004 1.7e-06 56.6 39 66.7
Lj2A507T49 Lonicera japonica HOM05D000206 ORTHO05D002004 1.7e-06 56.6 39 66.7
Thecc.01G171100 Theobroma cacao HOM05D000206 ORTHO05D002004 1.7e-06 56.6 39 66.7
Ah.10g033500 Amaranthus hybridus HOM05D000206 ORTHO05D002004 2.3e-06 56.2 39 66.7
Duzib138G1234 Durio zibethinus HOM05D000206 ORTHO05D002004 3.0e-06 55.8 39 66.7
Eucgr.I02177 Eucalyptus grandis HOM05D000206 ORTHO05D002004 3.0e-06 55.8 39 69.2
Hma1.2p1_0085F.1_g044190 Hydrangea macrophylla HOM05D000206 ORTHO05D002004 3.0e-06 55.8 40 57.5
Lsat_1_v5_gn_2_72821 Lactuca sativa HOM05D000206 ORTHO05D002004 3.0e-06 55.8 39 69.2
Prupe.7G188800 Prunus persica HOM05D000206 ORTHO05D002004 3.0e-06 55.8 40 65.0
RcHm_v2.0_Chr2g0096611 Rosa chinensis HOM05D000206 ORTHO05D002004 3.0e-06 55.8 40 65.0
Sc03g0004190 Simmondsia chinensis HOM05D000206 ORTHO05D002004 3.0e-06 55.8 40 62.5
AUR62003326 Chenopodium quinoa HOM05D000206 ORTHO05D002004 3.9e-06 55.5 39 64.1
AUR62016256 Chenopodium quinoa HOM05D000206 ORTHO05D002004 3.9e-06 55.5 39 64.1
AUR62029522 Chenopodium quinoa HOM05D000206 ORTHO05D002004 3.9e-06 55.5 39 64.1
FAN12G1762 Fragaria x ananassa HOM05D000206 ORTHO05D002004 3.9e-06 55.5 40 65.0
EL10Ac6g14721 Beta vulgaris HOM05D000206 ORTHO05D002004 5.1e-06 55.1 39 66.7
Cfa007123 Carpinus fangiana HOM05D000206 ORTHO05D002004 5.1e-06 55.1 40 65.0
Ciclev10009037m.g Citrus clementina HOM05D000206 ORTHO05D002004 5.1e-06 55.1 39 64.1
QL06p053550 Quercus lobata HOM05D000206 ORTHO05D002004 5.1e-06 55.1 40 67.5
Sabra11G0131500 Salix brachista HOM05D000206 ORTHO05D002004 5.1e-06 55.1 39 66.7
Cfa005416 Carpinus fangiana HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 67.5
Cfa020817 Carpinus fangiana HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 67.5
Haze_19187 Corylus avellana HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 67.5
DCAR_014058 Daucus carota HOM05D000206 ORTHO05D002004 6.6e-06 54.7 39 66.7
FvH4_4g14690 Fragaria vesca HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 62.5
HanXRQChr11g0335471 Helianthus annuus HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 65.0
MD10G1316500 Malus domestica HOM05D000206 ORTHO05D002004 6.6e-06 54.7 40 62.5
CiPaw.13G127500 Carya illinoinensis HOM05D000206 ORTHO05D002004 8.7e-06 54.3 40 65.0
CiPaw.13G127600 Carya illinoinensis HOM05D000206 ORTHO05D002004 8.7e-06 54.3 40 65.0
DCAR_006176 Daucus carota HOM05D000206 ORTHO05D002004 8.7e-06 54.3 39 69.2
ECA238G2253 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 56 53.6
Psat2g146920 Pisum sativum HOM05D000206 ORTHO05D002004 8.7e-06 54.3 40 62.5
PGR119G0734 Punica granatum HOM05D000206 ORTHO05D002004 8.7e-06 54.3 39 66.7
PGR119G0947 Punica granatum HOM05D000206 ORTHO05D002004 8.7e-06 54.3 39 66.7
QL02p035486 Quercus lobata HOM05D000206 ORTHO05D002004 8.7e-06 54.3 40 60.0
Rhsim08G0023800 Rhododendron simsii HOM05D000206 ORTHO05D002004 8.7e-06 54.3 39 59.0
TWI63G1691 Tripterygium wilfordii HOM05D000206 ORTHO05D002004 8.7e-06 54.3 39 61.5


User provided reference genes

Program Settings