Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015479 Vanilla planifolia HOM05D002413 ORTHO05D002638 2.7e-76 288.5 138 100.0
HPP92_017967 Vanilla planifolia HOM05D002413 ORTHO05D002638 1.2e-26 123.6 68 86.8
HPP92_015548 Vanilla planifolia HOM05D002413 ORTHO05D002638 8.3e-25 117.5 84 73.8
MBI15_g31906_MAGBIO Magnolia biondii HOM05D002413 ORTHO05D002638 2.0e-15 86.3 74 64.9
Zm00001eb033690 Zea mays HOM05D002413 ORTHO05D002638 7.8e-15 84.3 63 68.3
TAR626G0268 Trochodendron aralioides HOM05D002413 ORTHO05D002638 1.0e-14 84.0 75 64.0
Sed0021905 Sechium edule HOM05D002413 ORTHO05D002638 3.3e-13 79.0 76 60.5
ClCG09G021320 Citrullus lanatus HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
ClCG09G021330 Citrullus lanatus HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
MELO3C000217.2 Cucumis melo HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
CsaV3_7G011270 Cucumis sativus L. HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
CsaV3_7G012660 Cucumis sativus L. HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
CsaV3_7G012700 Cucumis sativus L. HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 60.0
Gohir.A12G179500 Gossypium hirsutum HOM05D002413 ORTHO05D002638 5.6e-13 78.2 75 58.7
Aqoxy1G01673 Aquilegia oxysepala HOM05D002413 ORTHO05D002638 7.3e-13 77.8 75 61.3
Sed0019293 Sechium edule HOM05D002413 ORTHO05D002638 1.2e-12 77.0 75 60.0
Sc07g0002300 Simmondsia chinensis HOM05D002413 ORTHO05D002638 1.2e-12 77.0 75 58.7
FvH4_3g29340 Fragaria vesca HOM05D002413 ORTHO05D002638 1.6e-12 76.6 75 58.7
FAN11G0549 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.6e-12 76.6 75 58.7
CANSAT11G2683 Cannabis sativa HOM05D002413 ORTHO05D002638 2.1e-12 76.3 75 58.7
Duzib068G0761 Durio zibethinus HOM05D002413 ORTHO05D002638 2.1e-12 76.3 75 58.7
CSS0033067 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 2.8e-12 75.9 75 58.7
Dinv40855 Davidia involucrata HOM05D002413 ORTHO05D002638 2.8e-12 75.9 75 58.7
Hma1.2p1_1402F.1_g281150 Hydrangea macrophylla HOM05D002413 ORTHO05D002638 2.8e-12 75.9 70 61.4
Prupe.4G242800 Prunus persica HOM05D002413 ORTHO05D002638 3.6e-12 75.5 75 58.7
EL10Ac4g07574 Beta vulgaris HOM05D002413 ORTHO05D002638 4.7e-12 75.1 75 57.3
FAN16G1153 Fragaria x ananassa HOM05D002413 ORTHO05D002638 4.7e-12 75.1 75 57.3
Cfa020196 Carpinus fangiana HOM05D002413 ORTHO05D002638 6.2e-12 74.7 75 57.3
COL.COLO4_09825 Corchorus olitorius HOM05D002413 ORTHO05D002638 6.2e-12 74.7 75 57.3
Haze_09820 Corylus avellana HOM05D002413 ORTHO05D002638 6.2e-12 74.7 75 57.3
MD03G1183300 Malus domestica HOM05D002413 ORTHO05D002638 6.2e-12 74.7 75 57.3
Duzib205G0891 Durio zibethinus HOM05D002413 ORTHO05D002638 8.1e-12 74.3 75 56.0
FAN25G2842 Fragaria x ananassa HOM05D002413 ORTHO05D002638 8.1e-12 74.3 75 57.3
Manes.03G141000 Manihot esculenta HOM05D002413 ORTHO05D002638 1.1e-11 73.9 70 60.0
Zm00001eb199300 Zea mays HOM05D002413 ORTHO05D002638 1.1e-11 73.9 63 61.9
Actinidia05010 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.4e-11 73.6 75 57.3
CSS0010014 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 1.8e-11 73.2 75 56.0
MD11G1200300 Malus domestica HOM05D002413 ORTHO05D002638 1.8e-11 73.2 74 58.1
FAN21G2296 Fragaria x ananassa HOM05D002413 ORTHO05D002638 2.3e-11 72.8 75 57.3
Gohir.A11G032300 Gossypium hirsutum HOM05D002413 ORTHO05D002638 2.3e-11 72.8 75 58.7
Gohir.D11G035600 Gossypium hirsutum HOM05D002413 ORTHO05D002638 2.3e-11 72.8 75 58.7
Gorai.007G038400 Gossypium raimondii HOM05D002413 ORTHO05D002638 2.3e-11 72.8 75 58.7
Duzib084G0378 Durio zibethinus HOM05D002413 ORTHO05D002638 3.1e-11 72.4 70 58.6
HanXRQChr03g0074041 Helianthus annuus HOM05D002413 ORTHO05D002638 4.0e-11 72.0 64 60.9
TWI38G1726 Tripterygium wilfordii HOM05D002413 ORTHO05D002638 4.0e-11 72.0 75 56.0
TWI39G1150 Tripterygium wilfordii HOM05D002413 ORTHO05D002638 5.2e-11 71.6 75 56.0
AUR62017098 Chenopodium quinoa HOM05D002413 ORTHO05D002638 6.8e-11 71.2 75 54.7
Os08g0490300 Oryza sativa ssp. japonica HOM05D002413 ORTHO05D002638 6.8e-11 71.2 89 47.2
Oeu005484.1 Olea europaea HOM05D002413 ORTHO05D002638 8.9e-11 70.9 75 57.3
ECA240G0531 Erigeron canadensis HOM05D002413 ORTHO05D002638 1.2e-10 70.5 70 57.1
Ca_22138_v3 Cicer arietinum L. HOM05D002413 ORTHO05D002638 1.5e-10 70.1 75 58.7
THA.LOC104813448 Tarenaya hassleriana HOM05D002413 ORTHO05D002638 2.0e-10 69.7 75 53.3
TAR629G2256 Trochodendron aralioides HOM05D002413 ORTHO05D002638 5.8e-10 68.2 75 57.3
THA.LOC104818108 Tarenaya hassleriana HOM05D002413 ORTHO05D002638 7.5e-10 67.8 83 49.4
TPR.G24142 Trifolium pratense HOM05D002413 ORTHO05D002638 9.8e-10 67.4 80 50.0
TAR629G2013 Trochodendron aralioides HOM05D002413 ORTHO05D002638 1.3e-09 67.0 76 52.6
Gorai.008G195400 Gossypium raimondii HOM05D002413 ORTHO05D002638 1.7e-09 66.6 75 53.3
Dinv10329 Davidia involucrata HOM05D002413 ORTHO05D002638 4.9e-09 65.1 69 56.5
Rhsim06G0229100 Rhododendron simsii HOM05D002413 ORTHO05D002638 4.9e-09 65.1 75 57.3
Lj6g0021071 Lotus japonicus HOM05D002413 ORTHO05D002638 1.1e-08 63.9 72 54.2
BolC2t07697H Brassica oleracea HOM05D002413 ORTHO05D002638 7.1e-08 61.2 69 53.6
Cfa009263 Carpinus fangiana HOM05D002413 ORTHO05D002638 7.1e-08 61.2 66 59.1
Haze_12296 Corylus avellana HOM05D002413 ORTHO05D002638 7.1e-08 61.2 66 59.1
QL03p056073 Quercus lobata HOM05D002413 ORTHO05D002638 7.1e-08 61.2 68 57.4
Actinidia37458 Actinidia chinensis HOM05D002413 ORTHO05D002638 9.2e-08 60.8 86 48.8
A02p09570 Brassica napus HOM05D002413 ORTHO05D002638 9.2e-08 60.8 65 53.8
BraA02t06021Z Brassica rapa HOM05D002413 ORTHO05D002638 9.2e-08 60.8 65 53.8
MD16G1106200 Malus domestica HOM05D002413 ORTHO05D002638 9.2e-08 60.8 85 50.6
Actinidia08113 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.2e-07 60.5 84 50.0
ATR0824G184 Amborella trichopoda HOM05D002413 ORTHO05D002638 1.2e-07 60.5 72 54.2
TAR629G1470 Trochodendron aralioides HOM05D002413 ORTHO05D002638 1.2e-07 60.5 73 54.8
Cpa.g.sc33.86 Carica papaya HOM05D002413 ORTHO05D002638 1.6e-07 60.1 86 50.0
Nitab4.5_0005906g0040 Nicotiana tabacum HOM05D002413 ORTHO05D002638 1.6e-07 60.1 87 47.1
SHI26538 Sapria himalayana HOM05D002413 ORTHO05D002638 1.6e-07 60.1 69 52.2
CSS0005806 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 2.1e-07 59.7 72 55.6
Cc05_g14910 Coffea canephora HOM05D002413 ORTHO05D002638 2.1e-07 59.7 75 50.7
MD13G1106000 Malus domestica HOM05D002413 ORTHO05D002638 2.1e-07 59.7 68 55.9
Nitab4.5_0003491g0080 Nicotiana tabacum HOM05D002413 ORTHO05D002638 2.1e-07 59.7 76 50.0
Nitab4.5_0003491g0090 Nicotiana tabacum HOM05D002413 ORTHO05D002638 2.1e-07 59.7 76 50.0
CDE09G0816 Ceratophyllum demersum HOM05D002413 ORTHO05D002638 2.7e-07 59.3 68 55.9
BcaB08g35930 Brassica carinata HOM05D002413 ORTHO05D002638 3.5e-07 58.9 83 47.0
Aa31LG2G6240 Aethionema arabicum HOM05D002413 ORTHO05D002638 4.6e-07 58.5 68 54.4
CiPaw.05G176500 Carya illinoinensis HOM05D002413 ORTHO05D002638 4.6e-07 58.5 68 54.4
Cc11_g16180 Coffea canephora HOM05D002413 ORTHO05D002638 4.6e-07 58.5 86 50.0
Dinv14758 Davidia involucrata HOM05D002413 ORTHO05D002638 4.6e-07 58.5 84 48.8
Gohir.D12G182100 Gossypium hirsutum HOM05D002413 ORTHO05D002638 4.6e-07 58.5 75 49.3
ECA234G1912 Erigeron canadensis HOM05D002413 ORTHO05D002638 6.0e-07 58.2 87 48.3
Aa31LG3G11610 Aethionema arabicum HOM05D002413 ORTHO05D002638 7.8e-07 57.8 82 48.8
Ah.06g181410 Amaranthus hybridus HOM05D002413 ORTHO05D002638 7.8e-07 57.8 80 46.2
CSS0003790 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 7.8e-07 57.8 86 48.8
CSS0046473 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 7.8e-07 57.8 86 48.8
COL.COLO4_23527 Corchorus olitorius HOM05D002413 ORTHO05D002638 7.8e-07 57.8 68 54.4
Gohir.D04G180600 Gossypium hirsutum HOM05D002413 ORTHO05D002638 7.8e-07 57.8 68 54.4
Gorai.012G173800 Gossypium raimondii HOM05D002413 ORTHO05D002638 7.8e-07 57.8 68 54.4
HanXRQChr13g0408151 Helianthus annuus HOM05D002413 ORTHO05D002638 7.8e-07 57.8 66 50.0
Lalb_Chr20g0114001 Lupinus albus HOM05D002413 ORTHO05D002638 7.8e-07 57.8 69 53.6
Nitab4.5_0005906g0030 Nicotiana tabacum HOM05D002413 ORTHO05D002638 7.8e-07 57.8 71 50.7
PSO017G0039 Papaver somniferum HOM05D002413 ORTHO05D002638 7.8e-07 57.8 82 45.1
Gohir.A04G137400 Gossypium hirsutum HOM05D002413 ORTHO05D002638 1.0e-06 57.4 68 52.9
Lj6P817T17 Lonicera japonica HOM05D002413 ORTHO05D002638 1.0e-06 57.4 75 50.7
Thecc.07G014400 Theobroma cacao HOM05D002413 ORTHO05D002638 1.0e-06 57.4 75 49.3
AT5G55670 Arabidopsis thaliana HOM05D002413 ORTHO05D002638 1.3e-06 57.0 86 46.5
Ca_30466_v3 Cicer arietinum L. HOM05D002413 ORTHO05D002638 1.3e-06 57.0 74 50.0
Nitab4.5_0006508g0030 Nicotiana tabacum HOM05D002413 ORTHO05D002638 1.3e-06 57.0 80 45.0
Sc04g0009750 Simmondsia chinensis HOM05D002413 ORTHO05D002638 1.3e-06 57.0 85 48.2
Dinv11030 Davidia involucrata HOM05D002413 ORTHO05D005118 1.7e-06 56.6 66 57.6
Lsat_1_v5_gn_9_89900 Lactuca sativa HOM05D002413 ORTHO05D002638 1.7e-06 56.6 69 50.7
Sc03g0011260 Simmondsia chinensis HOM05D002413 ORTHO05D002638 1.7e-06 56.6 70 50.0
CiPaw.12G137900 Carya illinoinensis HOM05D002413 ORTHO05D002638 2.3e-06 56.2 75 48.0
Eucgr.F03691 Eucalyptus grandis HOM05D002413 ORTHO05D002638 2.3e-06 56.2 77 45.5
C02p15920 Brassica napus HOM05D002413 ORTHO05D002638 3.0e-06 55.8 69 52.2
HanXRQChr12g0385871 Helianthus annuus HOM05D002413 ORTHO05D002638 3.0e-06 55.8 65 55.4
Peaxi162Scf01164g00123 Petunia axillaris HOM05D002413 ORTHO05D002638 3.0e-06 55.8 75 48.0
GSVIVG01000588001 Vitis vinifera HOM05D002413 ORTHO05D002638 3.0e-06 55.8 68 52.9
AUR62005526 Chenopodium quinoa HOM05D002413 ORTHO05D002638 3.9e-06 55.5 68 52.9
AUR62024211 Chenopodium quinoa HOM05D002413 ORTHO05D002638 3.9e-06 55.5 68 52.9
QL08p004208 Quercus lobata HOM05D002413 ORTHO05D002638 3.9e-06 55.5 75 48.0
Thecc.02G267600 Theobroma cacao HOM05D002413 ORTHO05D002638 3.9e-06 55.5 68 52.9
arahy.Tifrunner.gnm1.ann1.BMQ6HD Arachis hypogaea HOM05D002413 ORTHO05D002638 5.1e-06 55.1 73 47.9
Actinidia30409 Actinidia chinensis HOM05D002413 ORTHO05D002638 6.6e-06 54.7 58 58.6
COL.COLO4_23537 Corchorus olitorius HOM05D002413 ORTHO05D002638 6.6e-06 54.7 68 52.9
DCAR_031172 Daucus carota HOM05D002413 ORTHO05D002638 6.6e-06 54.7 66 53.0
Manes.13G019800 Manihot esculenta HOM05D002413 ORTHO05D002638 6.6e-06 54.7 65 56.9
TAR622G0183 Trochodendron aralioides HOM05D002413 ORTHO05D002638 6.6e-06 54.7 68 48.5
FvH4_4g25170 Fragaria vesca HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9
FAN12G2158 Fragaria x ananassa HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9
FAN22G0649 Fragaria x ananassa HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9
RcHm_v2.0_Chr4g0432361 Rosa chinensis HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9
RcHm_v2.0_Chr4g0432371 Rosa chinensis HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9
Thecc.02G267400 Theobroma cacao HOM05D002413 ORTHO05D002638 8.6e-06 54.3 68 52.9


User provided reference genes

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