Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 3.1e-265 917.9 466 100.0
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 1.1e-180 637.1 433 73.4
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 3.4e-179 632.1 463 70.0
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 2.9e-178 629.0 427 72.8
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 1.0e-175 620.5 455 67.7
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 1.3e-175 620.2 435 71.7
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 5.1e-175 618.2 463 67.2
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 1.5e-174 616.7 467 66.6
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 3.3e-174 615.5 458 68.8
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 5.6e-174 614.8 463 67.4
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 7.3e-174 614.4 460 66.5
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 1.6e-173 613.2 469 66.5
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 4.7e-173 611.7 461 66.2
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 8.1e-173 610.9 416 69.5
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 8.1e-173 610.9 452 67.9
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 8.1e-173 610.9 463 67.4
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 8.1e-173 610.9 465 66.0
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 1.8e-172 609.8 438 70.3
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 2.3e-172 609.4 447 67.8
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 3.1e-172 609.0 449 68.4
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 1.2e-171 607.1 409 71.1
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 1.5e-171 606.7 394 74.1
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 5.8e-171 604.7 408 71.8
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 7.6e-171 604.4 393 74.3
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 1.3e-170 603.6 475 63.6
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 2.2e-170 602.8 389 73.8
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 4.9e-170 601.7 467 64.5
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 4.9e-170 601.7 431 69.6
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 6.4e-170 601.3 441 68.3
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.4e-169 600.1 445 67.9
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 1.4e-169 600.1 457 65.4
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 1.9e-169 599.7 394 73.1
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 4.1e-169 598.6 384 73.7
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 5.4e-169 598.2 421 69.1
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 5.4e-169 598.2 479 63.7
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 5.4e-169 598.2 458 65.5
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 7.1e-169 597.8 463 65.9
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 7.1e-169 597.8 408 71.3
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 1.2e-168 597.0 373 74.3
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 1.6e-168 596.7 371 75.7
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 3.5e-168 595.5 432 68.5
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 4.6e-168 595.1 429 67.6
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 4.6e-168 595.1 390 73.6
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 6.0e-168 594.7 408 70.1
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 6.0e-168 594.7 414 68.6
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 1.0e-167 594.0 404 71.5
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 1.0e-167 594.0 406 69.2
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.7e-167 593.2 428 68.0
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 1.7e-167 593.2 460 64.8
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 1.7e-167 593.2 391 72.4
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 2.3e-167 592.8 416 70.7
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 2.3e-167 592.8 467 64.7
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 3.0e-167 592.4 389 72.2
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 3.0e-167 592.4 411 69.8
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 3.9e-167 592.0 408 69.6
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 3.9e-167 592.0 392 73.5
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 6.6e-167 591.3 461 64.4
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 6.6e-167 591.3 404 70.0
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 6.6e-167 591.3 425 67.8
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 6.6e-167 591.3 379 73.9
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 6.6e-167 591.3 460 64.1
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 8.6e-167 590.9 408 69.4
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 8.6e-167 590.9 416 70.0
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.1e-166 590.5 437 66.8
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 1.1e-166 590.5 442 65.8
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 1.1e-166 590.5 464 64.0
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.1e-166 590.5 411 69.3
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 2.5e-166 589.3 461 64.4
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 2.5e-166 589.3 371 75.5
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.3e-166 589.0 428 67.5
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 4.3e-166 588.6 415 68.4
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 5.6e-166 588.2 424 67.0
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 5.6e-166 588.2 414 70.8
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 7.3e-166 587.8 458 63.8
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 7.3e-166 587.8 458 63.3
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 9.6e-166 587.4 443 65.7
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 9.6e-166 587.4 462 64.7
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 2.1e-165 586.3 458 64.4
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 2.1e-165 586.3 412 69.9
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 2.8e-165 585.9 413 70.2
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 2.8e-165 585.9 372 76.1
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 4.7e-165 585.1 387 73.1
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 6.2e-165 584.7 371 74.4
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 8.1e-165 584.3 411 69.8
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 1.4e-164 583.6 371 74.4
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.8e-164 583.2 481 62.4
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.8e-164 583.2 462 64.1
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 2.4e-164 582.8 389 71.0
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 3.1e-164 582.4 387 72.6
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 3.1e-164 582.4 462 63.9
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 4.0e-164 582.0 403 71.2
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 4.0e-164 582.0 390 71.8
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 6.8e-164 581.3 429 66.2
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 8.9e-164 580.9 377 71.9
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 1.2e-163 580.5 387 72.4
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 1.5e-163 580.1 479 62.0
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 1.5e-163 580.1 471 63.9
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 1.5e-163 580.1 491 61.1
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 2.0e-163 579.7 383 71.5
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 7.6e-163 577.8 390 71.5
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 9.9e-163 577.4 463 63.3
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 1.3e-162 577.0 379 72.0
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 2.9e-162 575.9 413 68.5
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 4.9e-162 575.1 435 65.7
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 7.8e-160 567.8 424 67.9
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.4e-156 556.2 356 72.8
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 1.5e-155 553.5 415 68.0
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 9.9e-147 524.2 388 65.5
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 3.9e-143 512.3 447 60.4
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 2.2e-138 496.5 383 62.7
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 1.3e-135 487.3 390 60.0
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 3.0e-135 486.1 345 65.8
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.1e-134 484.2 434 59.9
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 5.3e-132 475.3 462 55.0
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 3.2e-129 466.1 367 62.7
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.0e-127 461.1 292 73.3
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 7.4e-126 454.9 382 58.1
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.9e-122 443.0 289 72.3
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 1.6e-120 437.2 345 62.9
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 3.0e-119 433.0 389 58.4
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 5.3e-116 422.2 275 70.9
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 5.9e-115 418.7 276 71.0
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 7.0e-108 395.2 278 69.4
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 1.6e-104 384.0 388 53.4
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 9.7e-102 374.8 292 64.0
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.4e-100 370.9 329 58.7
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 7.0e-100 368.6 252 69.0
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 9.1e-100 368.2 369 50.7
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 1.8e-95 354.0 331 52.6
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 7.5e-94 348.6 339 56.3
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 1.8e-87 327.4 291 58.1
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 5.2e-87 325.9 201 75.1
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 5.7e-86 322.4 211 73.5
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 7.0e-84 315.5 255 62.0
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 5.0e-82 309.3 234 64.1
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 1.4e-71 274.6 226 59.7
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 1.2e-70 271.6 211 62.6
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 8.3e-69 265.4 176 71.0
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 4.9e-61 239.6 354 40.7
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 2.3e-58 230.7 208 58.7
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 1.8e-55 221.1 208 56.7
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 2.3e-55 220.7 124 80.6
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 1.5e-54 218.0 281 42.7
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 1.7e-50 204.5 136 73.5
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 1.9e-41 174.5 133 63.9
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 6.2e-32 142.9 85 77.6
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 5.3e-31 139.8 113 61.1
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 1.5e-30 138.3 154 52.6
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 2.2e-29 134.4 106 63.2
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 3.8e-29 133.7 112 63.4
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 6.9e-23 112.8 77 70.1
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 2.0e-22 111.3 122 52.5
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 1.2e-19 102.1 88 61.4
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 2.7e-19 100.9 91 54.9
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 1.3e-13 82.0 50 74.0
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 7.2e-12 76.3 60 66.7
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 9.3e-12 75.9 60 66.7
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 1.6e-11 75.1 58 51.7
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 1.6e-11 75.1 70 52.9
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 2.2e-08 64.7 42 64.3


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