Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 6.1e-36 153.7 80 100.0
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 8.2e-25 116.7 60 96.7
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 6.3e-17 90.5 57 71.9
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 1.1e-16 89.7 55 74.5
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 1.8e-16 89.0 57 70.2
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 3.1e-16 88.2 57 70.2
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 3.1e-16 88.2 68 61.8
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 7.0e-16 87.0 55 70.9
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 7.0e-16 87.0 57 68.4
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 7.0e-16 87.0 57 68.4
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 9.1e-16 86.7 57 68.4
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 9.1e-16 86.7 57 68.4
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.2e-15 86.3 55 69.1
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 1.2e-15 86.3 56 67.9
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.6e-15 85.9 55 69.1
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.6e-15 85.9 55 69.1
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.6e-15 85.9 55 70.9
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.6e-15 85.9 55 69.1
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 2.0e-15 85.5 60 68.3
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 2.0e-15 85.5 73 56.2
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 2.6e-15 85.1 55 70.9
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 2.6e-15 85.1 55 69.1
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 2.6e-15 85.1 51 72.5
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 3.5e-15 84.7 55 69.1
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 3.5e-15 84.7 55 69.1
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 4.5e-15 84.3 57 66.7
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.5e-15 84.3 58 67.2
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 4.5e-15 84.3 57 70.2
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 4.5e-15 84.3 56 66.1
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 4.5e-15 84.3 56 66.1
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 5.9e-15 84.0 56 67.9
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 5.9e-15 84.0 57 66.7
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 5.9e-15 84.0 77 57.1
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 7.7e-15 83.6 57 66.7
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 7.7e-15 83.6 58 62.1
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 7.7e-15 83.6 55 67.3
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 7.7e-15 83.6 55 67.3
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 7.7e-15 83.6 55 67.3
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.0e-14 83.2 57 68.4
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.3e-14 82.8 57 64.9
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 1.7e-14 82.4 55 67.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.9e-14 81.6 55 65.5
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 2.9e-14 81.6 55 65.5
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 2.9e-14 81.6 53 67.9
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 3.8e-14 81.3 55 65.5
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 3.8e-14 81.3 55 65.5
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 5.0e-14 80.9 55 65.5
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 5.0e-14 80.9 55 67.3
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 6.5e-14 80.5 55 63.6
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 6.5e-14 80.5 76 52.6
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 6.5e-14 80.5 55 69.1
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 6.5e-14 80.5 55 67.3
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.5e-14 80.5 67 59.7
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 8.5e-14 80.1 55 63.6
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 8.5e-14 80.1 58 65.5
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 8.5e-14 80.1 58 63.8
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 8.5e-14 80.1 60 63.3
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 8.5e-14 80.1 71 56.3
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 8.5e-14 80.1 57 70.2
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 1.1e-13 79.7 58 60.3
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.1e-13 79.7 55 61.8
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 1.1e-13 79.7 58 63.8
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.1e-13 79.7 58 65.5
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 1.1e-13 79.7 55 69.1
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 1.1e-13 79.7 53 67.9
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.1e-13 79.7 74 55.4
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 1.9e-13 79.0 49 73.5
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 2.5e-13 78.6 48 75.0
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 2.5e-13 78.6 58 58.6
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 2.5e-13 78.6 49 73.5
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 3.2e-13 78.2 58 60.3
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 3.2e-13 78.2 55 65.5
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 3.2e-13 78.2 49 73.5
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 3.2e-13 78.2 56 66.1
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 3.2e-13 78.2 56 66.1
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.2e-13 77.8 59 64.4
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 5.5e-13 77.4 60 58.3
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 9.4e-13 76.6 59 59.3
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 9.4e-13 76.6 71 53.5
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 9.4e-13 76.6 48 72.9
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 9.4e-13 76.6 48 72.9
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 1.6e-12 75.9 58 60.3
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 2.7e-12 75.1 54 66.7
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 4.7e-12 74.3 58 55.2
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 4.7e-12 74.3 56 58.9
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 4.7e-12 74.3 53 66.0
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 6.1e-12 73.9 59 57.6
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 1.0e-11 73.2 48 66.7
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.0e-11 73.2 48 64.6
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.4e-11 72.8 45 71.1
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 1.8e-11 72.4 49 65.3
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 2.3e-11 72.0 46 67.4
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 2.3e-11 72.0 46 67.4
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 2.3e-11 72.0 46 67.4
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 2.3e-11 72.0 46 67.4
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 3.0e-11 71.6 55 65.5
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.5e-10 69.3 53 58.5
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 5.7e-10 67.4 58 58.6
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 7.5e-10 67.0 43 60.5
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.7e-09 65.9 43 65.1
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 3.7e-09 64.7 77 50.6
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 4.8e-09 64.3 42 59.5
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 2.4e-08 62.0 45 55.6
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 7.0e-08 60.5 44 59.1
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 1.2e-07 59.7 63 49.2
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.7e-07 58.5 66 47.0
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.3e-06 56.2 36 69.4
Cre03.g145667 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 1.7e-06 55.8 53 49.1
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 3.8e-06 54.7 37 64.9
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 6.5e-06 53.9 55 45.5


User provided reference genes

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