Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.8e-65 252.7 151 100.0
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.5e-43 179.9 149 75.2
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 3.3e-43 178.7 147 77.6
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 7.4e-43 177.6 154 76.6
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 9.6e-43 177.2 159 73.6
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 2.8e-42 175.6 148 75.0
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 6.3e-42 174.5 154 72.7
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 3.1e-41 172.2 148 75.7
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 4.1e-41 171.8 148 73.6
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 4.1e-41 171.8 156 69.9
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.1e-41 171.8 91 98.9
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 6.9e-41 171.0 160 69.4
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.2e-40 170.2 158 69.6
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.2e-40 170.2 160 70.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 2.6e-40 169.1 146 74.7
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 4.5e-40 168.3 158 68.4
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 5.9e-40 167.9 168 68.5
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 7.6e-40 167.5 161 68.9
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.3e-39 166.8 147 73.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.3e-39 166.8 161 69.6
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.3e-39 166.8 151 70.9
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 5.0e-39 164.9 155 69.0
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 6.5e-39 164.5 161 68.3
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 8.5e-39 164.1 162 67.3
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.1e-38 163.7 161 67.7
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.1e-38 163.7 158 69.0
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.4e-38 163.3 162 67.3
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.4e-38 163.3 150 72.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.4e-38 163.3 151 72.8
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.9e-38 162.9 158 69.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.9e-38 162.9 148 73.6
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.5e-38 162.5 149 72.5
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 2.5e-38 162.5 160 68.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 2.5e-38 162.5 158 68.4
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 3.2e-38 162.2 161 67.7
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.2e-38 162.2 160 66.9
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.2e-38 161.8 158 68.4
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.2e-38 161.8 160 66.9
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.2e-38 161.8 157 68.8
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.2e-38 161.8 148 71.6
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 5.5e-38 161.4 158 67.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 9.3e-38 160.6 156 67.3
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.2e-37 160.2 156 69.9
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.6e-37 159.8 167 65.9
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.6e-37 159.8 156 67.3
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.6e-37 159.8 159 66.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.7e-37 159.1 157 66.9
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.7e-37 159.1 162 67.9
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.7e-37 159.1 143 70.6
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 6.1e-37 157.9 154 70.1
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 6.1e-37 157.9 156 67.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.9e-37 157.5 159 67.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.0e-36 157.1 151 70.9
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.0e-36 157.1 158 66.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.3e-36 156.8 144 71.5
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.3e-36 156.8 152 69.1
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.8e-36 156.4 151 68.9
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.3e-36 156.0 145 71.0
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.3e-36 156.0 161 65.8
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.3e-36 156.0 155 66.5
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 3.0e-36 155.6 156 68.6
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 3.0e-36 155.6 156 69.2
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.9e-36 155.2 153 68.0
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.9e-36 155.2 151 66.9
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.1e-35 153.7 133 69.2
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 1.1e-35 153.7 155 67.7
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.1e-35 153.7 115 82.6
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.1e-35 153.7 156 66.0
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 4.3e-35 151.8 140 70.7
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.3e-35 151.8 157 66.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 5.7e-35 151.4 158 68.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.7e-35 151.4 168 62.5
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 5.7e-35 151.4 193 48.2
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 7.4e-35 151.0 152 65.8
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 9.7e-35 150.6 187 57.8
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 9.7e-35 150.6 151 68.2
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.2e-34 149.4 142 70.4
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.8e-34 149.1 158 64.6
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 3.7e-34 148.7 150 66.0
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 3.7e-34 148.7 150 66.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 4.8e-34 148.3 150 66.0
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.8e-33 146.4 142 69.0
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.4e-33 146.0 138 70.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.4e-33 146.0 138 70.3
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 3.1e-33 145.6 138 70.3
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 3.1e-33 145.6 143 67.8
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.5e-32 143.3 149 61.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.5e-32 143.3 141 65.2
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.5e-32 141.7 196 54.1
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 7.7e-32 141.0 115 73.0
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.2e-31 139.4 163 65.6
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.8e-31 138.7 144 63.2
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 8.5e-31 137.5 163 61.3
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 8.2e-26 120.9 110 65.5
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 8.2e-26 120.9 126 60.3
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.3e-23 113.6 103 61.2
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.5e-22 109.4 154 46.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 4.2e-22 108.6 105 57.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.5e-22 108.2 108 71.3
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 5.5e-22 108.2 171 44.4
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.3e-19 99.0 187 40.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.7e-18 96.7 127 50.4
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 1.9e-14 83.2 146 42.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 6.3e-10 68.2 60 56.7
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 4.1e-09 65.5 96 45.8
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 9.1e-09 64.3 96 40.6
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 3.5e-08 62.4 87 41.4
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 3.5e-08 62.4 43 69.8


User provided reference genes

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