Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 8.4e-102 373.6 181 100.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.8e-56 223.0 156 65.4
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 4.1e-56 221.9 167 60.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.3e-56 221.5 157 66.2
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 5.3e-56 221.5 156 62.2
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 2.7e-55 219.2 156 63.5
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 4.5e-55 218.4 157 63.1
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 5.9e-55 218.0 167 59.9
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 5.9e-55 218.0 156 62.8
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 5.9e-55 218.0 154 63.0
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 1.0e-54 217.2 150 64.7
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.3e-54 216.9 155 61.9
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 3.8e-54 215.3 158 61.4
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 6.5e-54 214.5 156 62.2
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.1e-53 213.8 158 60.1
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 1.5e-53 213.4 154 63.0
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 2.5e-53 212.6 157 60.5
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 2.5e-53 212.6 153 61.4
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 4.2e-53 211.8 157 60.5
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 4.2e-53 211.8 156 59.6
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 4.2e-53 211.8 156 59.6
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 5.5e-53 211.5 156 60.9
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 9.4e-53 210.7 177 56.5
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 9.4e-53 210.7 156 60.3
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 9.4e-53 210.7 157 59.9
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 1.2e-52 210.3 157 60.5
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 1.6e-52 209.9 158 60.1
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 1.6e-52 209.9 178 54.5
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 1.6e-52 209.9 153 62.7
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 2.1e-52 209.5 158 60.1
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 2.1e-52 209.5 157 59.9
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 2.7e-52 209.1 158 59.5
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 4.7e-52 208.4 157 59.2
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 4.7e-52 208.4 158 61.4
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 4.7e-52 208.4 160 58.8
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 6.1e-52 208.0 159 62.3
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 1.8e-51 206.5 157 59.9
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 2.3e-51 206.1 154 60.4
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 3.0e-51 205.7 156 59.6
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 6.8e-51 204.5 160 58.1
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 8.8e-51 204.1 155 60.6
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 8.8e-51 204.1 156 60.9
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 1.2e-50 203.8 154 60.4
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 1.5e-50 203.4 156 59.0
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.0e-50 203.0 159 58.5
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 2.0e-50 203.0 160 57.5
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 2.0e-50 203.0 154 58.4
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 2.0e-50 203.0 156 57.7
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 2.0e-50 203.0 156 59.6
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 2.6e-50 202.6 158 57.0
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 3.4e-50 202.2 156 59.0
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 3.4e-50 202.2 159 56.6
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.7e-50 201.4 157 57.3
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 5.7e-50 201.4 157 57.3
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 5.7e-50 201.4 179 55.3
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 5.7e-50 201.4 153 60.1
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 5.7e-50 201.4 156 57.7
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 7.5e-50 201.1 156 57.7
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 7.5e-50 201.1 151 60.9
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 9.8e-50 200.7 156 58.3
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 1.3e-49 200.3 159 59.1
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 1.3e-49 200.3 156 58.3
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 1.3e-49 200.3 155 59.4
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 1.3e-49 200.3 160 58.1
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 1.7e-49 199.9 158 59.5
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 1.7e-49 199.9 155 57.4
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 1.7e-49 199.9 156 58.3
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.8e-49 199.1 159 57.2
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 3.7e-49 198.7 161 57.8
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 3.7e-49 198.7 157 56.1
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 6.3e-49 198.0 159 56.0
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 8.3e-49 197.6 161 57.8
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 8.3e-49 197.6 154 57.1
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 8.3e-49 197.6 159 55.3
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 1.1e-48 197.2 151 57.0
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 1.4e-48 196.8 160 56.2
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.4e-48 196.8 154 57.1
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 2.4e-48 196.1 171 55.0
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 3.1e-48 195.7 160 57.5
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 3.1e-48 195.7 154 57.8
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 4.1e-48 195.3 155 56.8
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 4.1e-48 195.3 156 55.1
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 7.0e-48 194.5 160 58.1
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 7.0e-48 194.5 156 58.3
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 9.1e-48 194.1 155 55.5
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 9.1e-48 194.1 154 56.5
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 1.2e-47 193.7 177 55.4
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 1.2e-47 193.7 180 53.3
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 1.2e-47 193.7 157 57.3
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.0e-47 193.0 143 60.1
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 3.5e-47 192.2 168 53.6
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 4.5e-47 191.8 154 57.1
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 1.0e-46 190.7 157 57.3
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 1.0e-46 190.7 162 56.2
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 2.3e-46 189.5 159 56.0
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 2.3e-46 189.5 159 56.0
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 2.9e-46 189.1 154 57.1
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 8.6e-46 187.6 155 56.1
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 4.7e-44 181.8 136 57.4
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 3.0e-43 179.1 166 52.4
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 9.8e-42 174.1 153 52.9
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 1.7e-41 173.3 131 58.0
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 2.2e-41 172.9 155 53.5
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.1e-40 170.6 145 53.1
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.4e-40 170.2 134 54.5
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 2.4e-40 169.5 133 55.6
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 2.0e-39 166.4 130 56.9
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 1.5e-37 160.2 126 57.9
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 1.9e-37 159.8 154 48.7
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 3.3e-37 159.1 163 50.3
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 2.0e-34 149.8 116 55.2
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 9.2e-32 141.0 154 48.7
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.4e-27 127.1 131 51.1
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 3.6e-20 102.4 159 38.4
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 1.0e-14 84.3 192 32.8
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 8.6e-14 81.3 68 55.9
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 1.5e-10 70.5 94 38.3
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.3e-09 67.4 41 65.9
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 2.1e-07 60.1 132 30.3
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.3e-06 57.4 151 29.1
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 3.9e-06 55.8 156 29.5
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 8.7e-06 54.7 145 28.3


User provided reference genes

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