Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 9.7e-119 430.3 231 100.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.3e-67 260.4 195 64.6
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.0e-67 259.2 220 59.5
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 8.6e-67 257.7 226 61.1
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.1e-66 257.3 197 66.5
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.5e-66 256.9 220 59.1
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.9e-66 256.5 211 61.6
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 3.3e-66 255.8 211 63.5
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 2.8e-65 252.7 220 61.8
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.8e-65 252.7 193 64.8
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.8e-65 252.7 192 65.1
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 3.6e-65 252.3 224 60.3
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 3.6e-65 252.3 223 59.2
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 4.7e-65 251.9 205 62.4
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 8.0e-65 251.1 222 57.7
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.4e-64 250.4 221 58.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.4e-64 250.4 219 59.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 2.3e-64 249.6 193 64.8
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.1e-64 249.2 220 60.5
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 4.0e-64 248.8 222 59.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.2e-64 248.4 220 58.6
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.9e-64 247.7 216 62.5
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.2e-63 247.3 220 57.3
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.2e-63 247.3 216 58.8
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.5e-63 246.9 223 57.4
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 2.0e-63 246.5 222 56.3
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 4.4e-63 245.4 199 61.8
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 5.8e-63 245.0 222 59.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 5.8e-63 245.0 203 63.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 7.5e-63 244.6 214 59.3
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 9.8e-63 244.2 220 58.2
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.7e-62 243.4 220 58.2
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.7e-62 243.4 220 58.2
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.4e-62 241.5 229 56.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 6.4e-62 241.5 223 55.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 6.4e-62 241.5 213 59.2
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.4e-61 240.4 223 55.6
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.9e-61 240.0 214 58.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.1e-61 238.8 192 62.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 7.0e-61 238.0 224 56.7
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 7.0e-61 238.0 223 55.2
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 9.2e-61 237.7 216 57.4
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.2e-60 237.3 220 56.8
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.2e-60 237.3 224 52.7
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.2e-60 237.3 215 58.1
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.6e-60 236.9 209 58.9
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.1e-60 236.5 224 54.9
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.1e-60 236.5 220 55.0
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.1e-60 236.5 209 58.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 2.7e-60 236.1 196 62.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.5e-60 235.7 214 60.7
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.5e-60 235.7 210 58.6
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.5e-60 235.7 196 62.2
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 4.6e-60 235.3 214 57.5
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.0e-59 234.2 225 58.2
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 3.9e-59 232.3 192 58.3
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.9e-59 232.3 210 57.6
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 5.1e-59 231.9 188 62.8
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 5.1e-59 231.9 209 57.9
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 6.6e-59 231.5 225 58.7
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.1e-58 230.7 193 61.1
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.5e-58 230.3 205 58.0
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.5e-58 229.6 221 53.4
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 2.5e-58 229.6 204 57.4
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.3e-58 229.2 192 57.8
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 3.3e-58 229.2 195 60.0
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.6e-58 228.4 219 54.8
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 7.3e-58 228.0 208 55.8
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 9.5e-58 227.6 218 54.1
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.8e-57 226.1 217 53.5
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 6.2e-57 224.9 209 54.5
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.8e-56 223.4 211 58.8
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.3e-56 223.0 184 63.0
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 2.3e-56 223.0 195 60.5
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 3.1e-56 222.6 224 54.0
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 5.2e-56 221.9 188 61.2
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.2e-55 220.7 232 52.2
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.4e-55 218.8 220 53.2
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 7.5e-55 218.0 225 52.4
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.7e-54 216.9 222 51.8
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 2.2e-54 216.5 225 53.3
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 2.9e-54 216.1 195 56.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.7e-54 215.7 202 56.4
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.1e-53 214.2 195 56.4
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-53 213.4 200 56.5
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.2e-53 212.6 226 51.3
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 4.1e-53 212.2 195 55.9
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 9.2e-53 211.1 195 55.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.6e-52 210.3 195 55.4
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.6e-52 210.3 193 56.5
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.1e-52 209.9 187 56.7
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.1e-52 209.9 187 56.7
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.1e-52 209.9 187 56.7
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 3.3e-50 202.6 191 51.8
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.1e-48 196.1 172 55.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 4.0e-48 195.7 237 48.1
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.9e-46 189.5 193 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 9.2e-45 184.5 186 54.3
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.6e-41 172.6 207 48.3
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.7e-38 163.7 235 45.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.5e-31 139.0 193 43.0
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.8e-27 127.1 102 58.8
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.5e-26 124.0 133 54.1
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.5e-26 123.2 217 36.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.2e-23 114.4 109 51.4
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 7.9e-20 101.7 119 45.4
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 5.1e-19 99.0 79 65.8
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 5.8e-15 85.5 188 34.0
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.3e-11 73.6 60 65.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 3.9e-11 72.8 194 34.0
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.0e-06 58.2 52 55.8


User provided reference genes

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