Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.1e-127 458.4 218 100.0
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 3.3e-68 262.3 224 56.2
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 3.3e-68 262.3 224 56.2
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 4.3e-68 261.9 210 58.1
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 7.3e-68 261.2 210 58.1
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 2.8e-67 259.2 209 57.9
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 2.8e-67 259.2 217 56.7
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 3.6e-67 258.8 205 59.0
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 3.6e-67 258.8 208 59.1
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 1.1e-66 257.3 209 57.4
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.8e-66 256.5 205 57.1
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 4.0e-66 255.4 209 56.0
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 5.3e-66 255.0 205 58.0
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 9.0e-66 254.2 205 56.1
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 2.0e-65 253.1 207 56.5
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 2.6e-65 252.7 203 56.2
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 3.4e-65 252.3 211 56.4
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 4.5e-65 251.9 209 56.5
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 7.6e-65 251.1 208 56.7
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 7.6e-65 251.1 209 55.5
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 9.9e-65 250.8 203 57.6
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 1.3e-64 250.4 206 56.8
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 2.2e-64 249.6 207 56.5
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 2.2e-64 249.6 203 56.7
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 2.9e-64 249.2 203 56.2
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 2.9e-64 249.2 207 55.6
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 3.8e-64 248.8 203 56.7
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 4.9e-64 248.4 207 56.5
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 6.4e-64 248.1 208 54.3
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.1e-63 247.3 209 56.5
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.1e-63 247.3 203 56.2
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 1.4e-63 246.9 203 56.2
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 1.9e-63 246.5 203 55.7
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 1.9e-63 246.5 207 55.6
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 2.4e-63 246.1 203 56.2
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 4.2e-63 245.4 209 54.5
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 4.2e-63 245.4 209 54.5
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 4.2e-63 245.4 207 57.0
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 4.2e-63 245.4 207 56.5
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.4e-63 245.0 207 56.5
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 7.1e-63 244.6 207 56.5
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 7.1e-63 244.6 207 52.2
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 9.3e-63 244.2 203 55.2
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 1.2e-62 243.8 203 55.7
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 1.2e-62 243.8 203 55.7
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.2e-62 243.8 207 56.5
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 1.6e-62 243.4 207 53.6
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 1.6e-62 243.4 207 53.6
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.6e-62 243.4 200 54.5
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 7.9e-62 241.1 206 54.4
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 7.9e-62 241.1 201 56.2
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 1.8e-61 240.0 207 52.2
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 2.3e-61 239.6 207 53.6
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 2.3e-61 239.6 207 52.7
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 3.0e-61 239.2 207 52.7
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 3.0e-61 239.2 203 54.7
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 3.9e-61 238.8 207 54.6
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.9e-61 238.8 207 55.6
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 6.7e-61 238.0 207 53.6
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 8.7e-61 237.7 207 54.6
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 8.7e-61 237.7 203 54.2
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 1.1e-60 237.3 205 55.1
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 1.9e-60 236.5 207 52.2
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 1.9e-60 236.5 207 53.6
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 2.5e-60 236.1 207 54.6
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 4.3e-60 235.3 208 55.3
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 4.3e-60 235.3 205 53.2
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 9.6e-60 234.2 207 52.7
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 2.8e-59 232.6 207 52.7
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 2.8e-59 232.6 207 52.7
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 3.6e-59 232.3 203 55.7
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 4.8e-59 231.9 207 54.1
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 8.1e-59 231.1 203 52.2
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 8.1e-59 231.1 207 51.7
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 3.1e-58 229.2 205 50.7
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 4.0e-58 228.8 207 53.1
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 2.0e-57 226.5 190 55.8
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 4.5e-57 225.3 203 51.7
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 4.9e-56 221.9 191 56.5
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 1.1e-55 220.7 207 49.8
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 1.9e-55 219.9 192 56.2
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 3.2e-55 219.2 200 52.0
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 7.1e-55 218.0 192 54.7
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 1.2e-54 217.2 186 51.1
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.8e-53 213.4 205 49.3
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 2.5e-52 209.5 186 51.6
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.1e-51 206.5 168 54.8
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 2.1e-51 206.5 213 45.5
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.2e-49 200.7 177 53.7
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.7e-48 196.8 167 53.9
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 1.9e-47 193.4 164 54.9
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 3.5e-46 189.1 215 44.2
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 2.3e-45 186.4 168 53.6
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 4.1e-42 175.6 162 50.6
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 6.9e-42 174.9 164 49.4
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 3.4e-41 172.6 150 52.0
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 4.5e-41 172.2 124 61.3
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 5.0e-40 168.7 148 52.0
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 4.2e-39 165.6 122 61.5
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 9.3e-39 164.5 149 51.7
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 2.3e-37 159.8 150 48.0
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.3e-37 159.8 148 50.0
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 6.9e-34 148.3 153 49.0
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 1.9e-31 140.2 170 41.2
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 2.5e-31 139.8 182 38.5
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 1.4e-29 134.0 278 29.5
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 1.3e-27 127.5 149 43.0
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 8.2e-27 124.8 167 40.1
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 1.8e-26 123.6 205 35.6
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 1.7e-24 117.1 105 49.5
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 2.2e-24 116.7 105 49.5
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 2.4e-18 96.7 152 36.8
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.2e-14 84.3 117 41.9
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 4.7e-14 82.4 59 64.4
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 7.5e-12 75.1 61 55.7
CBR_g30366 Chara braunii HOM05D007035 ORTHO05D008774 1.6e-06 57.4 65 38.5
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 2.1e-06 57.0 49 49.0


User provided reference genes

Program Settings