Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 3.2e-31 137.9 75 100.0
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 9.4e-31 136.3 75 98.7
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.6e-09 65.9 75 57.3
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 8.5e-08 60.1 83 54.2
HPP92_020952 Vanilla planifolia HOM05D005953 ORTHO05D004056 8.5e-08 60.1 80 53.8
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.1e-07 59.7 76 60.5
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 1.5e-07 59.3 81 54.3
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 3.2e-07 58.2 74 54.1
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 3.2e-07 58.2 73 56.2
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 4.2e-07 57.8 79 53.2
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 4.2e-07 57.8 77 54.5
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.5e-07 57.4 83 47.0
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 5.5e-07 57.4 73 49.3
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 5.5e-07 57.4 73 49.3
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 7.2e-07 57.0 79 49.4
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 7.2e-07 57.0 72 52.8
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 7.2e-07 57.0 69 53.6
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 7.2e-07 57.0 76 53.9
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 9.4e-07 56.6 76 53.9
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 1.6e-06 55.8 71 52.1
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 2.7e-06 55.1 80 48.8
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 2.7e-06 55.1 82 50.0
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 2.7e-06 55.1 81 51.9
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 2.7e-06 55.1 68 51.5
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 2.7e-06 55.1 68 51.5
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 3.6e-06 54.7 75 53.3
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 3.6e-06 54.7 74 52.7
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 4.7e-06 54.3 75 50.7
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 4.7e-06 54.3 78 46.2
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 4.7e-06 54.3 78 50.0
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 4.7e-06 54.3 75 49.3
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 6.1e-06 53.9 76 52.6
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 6.1e-06 53.9 78 50.0
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 6.1e-06 53.9 74 50.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 6.1e-06 53.9 74 50.0


User provided reference genes

Program Settings