Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 0.0e+00 1092.0 541 100.0
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 4.8e-153 545.4 543 50.5
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 9.1e-152 541.2 546 51.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 2.7e-151 539.7 543 50.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.7e-151 539.7 544 51.1
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 3.5e-151 539.3 543 50.8
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 5.0e-150 535.4 543 50.6
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 5.0e-150 535.4 543 50.6
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.5e-149 533.1 544 51.3
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.2e-148 530.8 545 50.1
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.6e-148 530.4 543 49.2
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 4.7e-148 528.9 543 51.7
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 8.0e-148 528.1 543 49.2
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 5.2e-147 525.4 543 49.2
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.8e-147 525.0 543 49.7
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.2e-146 524.2 543 48.6
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.2e-146 524.2 546 50.2
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 5.7e-146 521.9 545 49.5
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 4.8e-145 518.8 545 48.1
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 8.3e-145 518.1 543 49.5
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 4.1e-144 515.8 543 48.4
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 7.0e-144 515.0 542 47.8
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 9.1e-144 514.6 543 47.7
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.2e-143 514.2 555 50.1
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 5.9e-143 511.9 545 48.8
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.0e-142 511.1 543 48.6
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.3e-142 510.8 544 48.7
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.3e-142 510.0 569 46.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 2.9e-142 509.6 543 48.3
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.9e-142 509.6 544 49.3
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 5.0e-142 508.8 547 48.4
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.1e-141 507.7 547 50.1
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.5e-141 507.3 543 47.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 3.2e-141 506.1 543 48.1
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 4.2e-141 505.8 543 47.0
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 4.2e-141 505.8 562 48.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 5.5e-141 505.4 542 48.5
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 1.6e-140 503.8 541 47.9
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.8e-140 503.1 544 49.1
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 4.7e-140 502.3 546 48.0
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 6.1e-140 501.9 544 47.2
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 8.0e-140 501.5 545 47.2
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 1.0e-139 501.1 544 48.7
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.8e-139 500.4 543 46.4
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.3e-139 500.0 543 46.2
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 6.8e-139 498.4 544 46.1
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.2e-138 497.7 546 45.4
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.5e-138 497.3 550 45.8
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.5e-138 497.3 550 49.6
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.5e-138 497.3 542 46.9
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 2.0e-138 496.9 547 48.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 4.4e-138 495.7 546 45.2
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 4.4e-138 495.7 544 46.7
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 2.2e-137 493.4 541 47.0
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 6.3e-137 491.9 552 47.1
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 8.3e-137 491.5 545 47.3
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.8e-136 490.3 546 46.3
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 4.1e-136 489.2 543 45.3
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 7.0e-136 488.4 548 47.4
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 7.0e-136 488.4 552 46.7
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 9.2e-136 488.0 552 45.5
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.2e-135 487.6 544 47.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 2.7e-135 486.5 551 46.3
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 3.5e-135 486.1 542 47.2
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.8e-134 482.6 548 46.5
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 6.6e-134 481.9 548 46.9
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 6.6e-134 481.9 547 47.9
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 6.6e-134 481.9 549 47.9
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.5e-133 480.7 544 47.1
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.5e-133 480.7 547 48.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 5.6e-133 478.8 537 47.1
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.8e-132 476.5 545 46.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 3.6e-132 476.1 570 46.7
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 4.7e-132 475.7 542 46.5
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 1.8e-131 473.8 542 45.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 8.9e-131 471.5 543 46.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.2e-130 471.1 476 49.8
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.5e-130 470.7 469 49.7
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.5e-130 470.7 545 48.4
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 3.4e-130 469.5 543 46.6
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 4.4e-130 469.2 543 47.0
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 2.2e-129 466.8 574 42.3
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 2.9e-129 466.5 543 46.4
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 3.5e-127 459.5 480 48.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 6.6e-126 455.3 607 43.7
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 9.5e-125 451.4 457 47.0
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 9.5e-125 451.4 476 49.4
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.6e-124 450.7 593 42.5
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.7e-124 449.1 636 40.6
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.7e-121 440.7 543 43.5
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.4e-120 437.6 543 42.4
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.2e-119 434.5 432 51.6
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.2e-112 409.8 553 40.7
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.7e-111 406.8 559 41.0
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 5.1e-110 402.5 487 43.9
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.6e-108 397.5 471 43.9
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 9.2e-104 381.7 541 42.0
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.6e-100 369.8 313 57.5
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.0e-99 366.3 449 44.8
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.4e-90 336.7 562 35.9
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.3e-86 323.9 569 35.9
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 6.7e-78 295.8 478 37.0
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 4.8e-76 289.7 482 35.9
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 6.9e-75 285.8 564 33.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 9.0e-75 285.4 403 40.2
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-74 284.6 475 35.6
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.2e-68 264.2 223 57.0
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 3.7e-52 210.3 211 49.8
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 8.0e-39 166.0 108 69.4
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.4e-29 133.7 251 33.1
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.6e-26 125.2 170 42.4
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 5.9e-26 123.2 195 35.9
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.3e-25 121.3 76 72.4
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.6e-13 81.3 59 52.5
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-11 74.7 102 35.3
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 7.0e-11 73.2 115 33.9
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 6.0e-10 70.1 127 37.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 9.5e-08 62.8 57 54.4
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 1.4e-06 58.9 90 36.7


User provided reference genes

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