Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 0.0e+00 1130.2 874 100.0
HPP92_014921 Vanilla planifolia HOM05D007595 ORTHO05D009570 5.7e-87 326.6 195 93.8
HPP92_014920 Vanilla planifolia HOM05D000188 ORTHO05D003976 9.8e-63 246.1 181 75.1
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 3.4e-39 167.9 413 54.0
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 3.2e-29 134.8 446 50.7
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.4e-24 119.4 188 39.4
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 1.4e-24 119.4 172 43.0
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 4.0e-24 117.9 159 39.6
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 1.2e-23 116.3 178 39.9
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 2.0e-23 115.5 186 38.7
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 2.6e-23 115.2 275 33.5
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.4e-23 114.8 173 39.3
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 3.4e-23 114.8 173 41.6
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 4.4e-23 114.4 173 39.9
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 4.4e-23 114.4 173 39.9
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 4.4e-23 114.4 180 39.4
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 1.3e-22 112.8 270 30.7
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 2.2e-22 112.1 175 39.4
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 2.9e-22 111.7 175 40.0
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 2.9e-22 111.7 195 35.9
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 4.9e-22 110.9 173 40.5
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 6.4e-22 110.5 267 30.7
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 8.4e-22 110.2 173 39.3
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 8.4e-22 110.2 159 39.0
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 1.4e-21 109.4 240 32.1
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 3.2e-21 108.2 170 41.2
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 3.2e-21 108.2 251 34.3
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 7.1e-21 107.1 152 40.1
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 7.1e-21 107.1 183 36.6
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 7.1e-21 107.1 188 35.6
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 9.3e-21 106.7 173 38.7
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 9.3e-21 106.7 167 37.7
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 9.3e-21 106.7 192 35.4
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 1.2e-20 106.3 176 38.6
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.1e-20 105.5 168 38.7
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.5e-20 104.8 184 35.9
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.5e-20 104.8 177 37.3
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 3.5e-20 104.8 173 37.6
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 4.6e-20 104.4 98 53.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 6.0e-20 104.0 242 33.9
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 6.0e-20 104.0 161 37.3
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 6.0e-20 104.0 183 35.5
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 6.0e-20 104.0 143 41.3
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 7.8e-20 103.6 173 38.7
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.0e-19 103.2 181 34.3
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.0e-19 103.2 115 46.1
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.3e-19 102.8 119 45.4
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.3e-19 102.8 172 37.8
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 1.3e-19 102.8 172 37.8
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.7e-19 102.4 183 35.5
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.7e-19 102.4 168 32.7
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.3e-19 102.1 165 38.2
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 3.0e-19 101.7 242 33.5
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 6.6e-19 100.5 171 33.9
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 6.6e-19 100.5 183 36.6
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 8.7e-19 100.1 173 35.8
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 8.7e-19 100.1 150 37.3
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 8.7e-19 100.1 150 37.3
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 8.7e-19 100.1 211 31.3
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 8.7e-19 100.1 243 33.3
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 1.5e-18 99.4 245 32.7
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.5e-18 99.4 150 36.7
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 1.5e-18 99.4 163 35.0
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 1.9e-18 99.0 181 35.9
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 1.9e-18 99.0 141 38.3
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 2.5e-18 98.6 167 34.7
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 3.3e-18 98.2 107 45.8
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 4.3e-18 97.8 141 37.6
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 5.6e-18 97.4 144 38.2
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 5.6e-18 97.4 139 40.3
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 5.6e-18 97.4 122 41.0
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.3e-17 96.3 138 38.4
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 1.6e-17 95.9 141 37.6
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 2.8e-17 95.1 243 31.3
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 6.2e-17 94.0 140 38.6
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 1.4e-16 92.8 95 47.4
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 1.8e-16 92.4 137 37.2
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 4.0e-16 91.3 189 32.8
Zm00001eb272070 Zea mays HOM05D011046 ORTHO05D013342 4.0e-16 91.3 137 36.5
Zm00001eb324030 Zea mays HOM05D011046 ORTHO05D013342 4.0e-16 91.3 137 36.5
Zm00001eb336430 Zea mays HOM05D011046 ORTHO05D013342 4.0e-16 91.3 137 36.5
Zm00001eb427360 Zea mays HOM05D011046 ORTHO05D013342 4.0e-16 91.3 137 36.5
Zm00001eb442860 Zea mays HOM05D011046 ORTHO05D013342 4.0e-16 91.3 137 36.5
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 6.9e-16 90.5 143 37.8
Zm00001eb210080 Zea mays HOM05D011046 ORTHO05D013342 1.2e-15 89.7 142 34.5
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 1.2e-15 89.7 142 34.5
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 3.4e-15 88.2 94 47.9
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 2.4e-13 82.0 299 57.9
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 1.2e-12 79.7 135 38.5
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 4.6e-12 77.8 135 34.8
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 6.0e-12 77.4 106 39.6
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.0e-11 76.6 111 39.6
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 1.8e-11 75.9 130 40.0
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.8e-11 75.9 110 42.7
Os10g0147250 Oryza sativa ssp. japonica HOM05D011046 ORTHO05D013342 6.7e-11 73.9 111 43.2
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 7.4e-10 70.5 104 40.4
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.1e-09 68.9 129 34.1
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.7e-09 68.2 121 35.5
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 1.8e-08 65.9 175 28.6
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 4.0e-08 64.7 140 32.9
AagrBONN_evm.TU.Sc2ySwM_228.5501 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 59.7 97 35.1
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 2.2e-06 58.9 96 33.3
Gohir.A12G250800 Gossypium hirsutum HOM05D000001 ORTHO05D000003 3.8e-06 58.2 154 24.7
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 3.8e-06 58.2 69 44.9
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 3.8e-06 58.2 82 41.5
VMungo1127G1215 Vigna mungo HOM05D007402 ORTHO05D003673 3.8e-06 58.2 156 26.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 4.9e-06 57.8 181 25.4


User provided reference genes

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