Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.7e-66 256.1 154 100.0
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 4.9e-18 95.1 158 49.4
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.3e-14 82.0 137 48.2
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.8e-13 79.3 125 54.4
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 3.6e-13 79.0 151 47.7
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.1e-13 77.8 155 47.1
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.1e-12 75.9 155 45.8
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 3.1e-12 75.9 154 46.8
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 6.9e-12 74.7 137 47.4
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.5e-11 73.6 163 45.4
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.5e-11 73.6 126 51.6
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 1.5e-11 73.6 172 43.6
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 2.0e-11 73.2 159 44.0
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 3.4e-11 72.4 122 54.1
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 4.5e-11 72.0 162 44.4
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 4.5e-11 72.0 163 44.2
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.5e-11 72.0 123 52.0
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 4.5e-11 72.0 122 53.3
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.3e-10 70.5 137 46.0
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.3e-10 70.5 127 48.8
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.2e-10 69.7 129 49.6
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.9e-10 69.3 153 44.4
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.9e-10 69.3 125 50.4
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.9e-10 69.3 121 53.7
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 3.8e-10 68.9 114 55.3
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.9e-10 68.6 122 51.6
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.9e-10 68.6 122 51.6
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.9e-10 68.6 146 45.9
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 4.9e-10 68.6 160 46.2
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 4.9e-10 68.6 168 41.7
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 6.4e-10 68.2 121 52.9
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 8.4e-10 67.8 150 43.3
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 8.4e-10 67.8 153 44.4
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 8.4e-10 67.8 143 44.8
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 1.1e-09 67.4 125 48.8
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 1.4e-09 67.0 121 52.1
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.9e-09 66.6 159 42.8
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 3.2e-09 65.9 122 50.0
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 3.2e-09 65.9 140 46.4
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 4.2e-09 65.5 127 48.8
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 4.2e-09 65.5 126 50.0
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 4.2e-09 65.5 162 42.6
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 7.1e-09 64.7 134 46.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 9.3e-09 64.3 116 51.7
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 1.2e-08 63.9 127 48.0
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.2e-08 63.9 150 43.3
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.2e-08 63.9 165 41.8
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.2e-08 63.9 136 45.6
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.6e-08 63.5 147 45.6
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 2.1e-08 63.2 156 41.0
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.7e-08 62.8 121 47.1
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.7e-08 62.8 128 47.7
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 2.7e-08 62.8 154 43.5
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 3.5e-08 62.4 129 44.2
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 3.5e-08 62.4 123 50.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 4.6e-08 62.0 128 47.7
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 4.6e-08 62.0 128 47.7
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 6.0e-08 61.6 123 49.6
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 6.0e-08 61.6 124 47.6
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 7.9e-08 61.2 122 50.0
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 7.9e-08 61.2 122 50.0
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 7.9e-08 61.2 122 50.0
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 7.9e-08 61.2 122 48.4
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 7.9e-08 61.2 139 43.2
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 1.0e-07 60.8 122 49.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 1.0e-07 60.8 137 38.0
Os02g0815300 Oryza sativa ssp. japonica HOM05D060333 ORTHO05D049488 1.3e-07 60.5 109 53.2
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 1.3e-07 60.5 154 42.9
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.3e-07 60.5 127 46.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.8e-07 60.1 122 49.2
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 1.8e-07 60.1 121 48.8
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 1.8e-07 60.1 122 47.5
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.3e-07 59.7 123 49.6
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.3e-07 59.7 123 49.6
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 3.0e-07 59.3 117 49.6
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 3.0e-07 59.3 122 48.4
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.9e-07 58.9 133 45.1
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.9e-07 58.9 133 45.1
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 5.1e-07 58.5 132 44.7
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 6.7e-07 58.2 130 46.2
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 6.7e-07 58.2 123 48.8
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 8.7e-07 57.8 120 46.7
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.1e-06 57.4 120 47.5
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 1.1e-06 57.4 122 47.5
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.9e-06 56.6 126 46.8
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.5e-06 56.2 156 41.0
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 3.3e-06 55.8 153 38.6
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 3.3e-06 55.8 120 47.5
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.3e-06 55.5 130 46.2
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 4.3e-06 55.5 133 44.4
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 5.6e-06 55.1 90 56.7
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.6e-06 55.1 98 56.1
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 9.6e-06 54.3 115 47.0


User provided reference genes

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