Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014806 Vanilla planifolia HOM05D007576 ORTHO05D009576 0.0e+00 1523.8 779 100.0
Aqoxy1G02531 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 1.4e-116 424.9 808 38.2
Aqoxy1G02534 Aquilegia oxysepala HOM05D007576 ORTHO05D009576 1.4e-116 424.9 808 38.2
Nn1g06600 Nelumbo nucifera HOM05D007576 ORTHO05D009576 2.0e-115 421.0 819 37.5
MBI18_g17005_MAGBIO Magnolia biondii HOM05D007576 ORTHO05D009576 2.6e-115 420.6 832 38.3
Manes.17G043700 Manihot esculenta HOM05D007576 ORTHO05D009576 7.5e-107 392.5 768 37.2
Potri.011G050600 Populus trichocarpa HOM05D007576 ORTHO05D009576 1.7e-106 391.3 749 37.4
QL05p039732 Quercus lobata HOM05D007576 ORTHO05D009576 2.9e-106 390.6 759 38.1
Cfa000420 Carpinus fangiana HOM05D007576 ORTHO05D009576 3.7e-106 390.2 782 36.3
Dinv07540 Davidia involucrata HOM05D007576 ORTHO05D009576 1.1e-105 388.7 792 37.0
Thecc.06G190300 Theobroma cacao HOM05D007576 ORTHO05D009576 4.1e-105 386.7 738 38.2
ClCG01G022850 Citrullus lanatus HOM05D007576 ORTHO05D009576 3.5e-104 383.6 792 36.2
CSS0005805 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 7.8e-104 382.5 771 37.6
PSO675G5421 Papaver somniferum HOM05D007576 ORTHO05D009576 1.0e-103 382.1 821 36.8
RcHm_v2.0_Chr5g0008071 Rosa chinensis HOM05D007576 ORTHO05D009576 3.9e-103 380.2 735 37.6
Sabra11G0034500 Salix brachista HOM05D007576 ORTHO05D009576 3.9e-103 380.2 735 36.7
Glyma.05G009500 Glycine max HOM05D007576 ORTHO05D009576 3.3e-102 377.1 767 36.2
Duzib192G1068 Durio zibethinus HOM05D007576 ORTHO05D009576 5.6e-102 376.3 741 37.8
Eucgr.E03347 Eucalyptus grandis HOM05D007576 ORTHO05D009576 5.6e-102 376.3 750 36.7
MD10G1296200 Malus domestica HOM05D007576 ORTHO05D009576 1.2e-101 375.2 765 35.7
Glyma.17G117500 Glycine max HOM05D007576 ORTHO05D009576 4.7e-101 373.2 765 35.8
MELO3C007295.2 Cucumis melo HOM05D007576 ORTHO05D009576 8.1e-101 372.5 794 36.3
AUR62016989 Chenopodium quinoa HOM05D007576 ORTHO05D009576 1.1e-100 372.1 789 34.5
Psat4g041840 Pisum sativum HOM05D007576 ORTHO05D009576 1.8e-100 371.3 780 35.1
CsaV3_6G050020 Cucumis sativus L. HOM05D007576 ORTHO05D009576 2.3e-100 370.9 776 36.6
FAN21G0504 Fragaria x ananassa HOM05D007576 ORTHO05D009576 8.9e-100 369.0 736 37.2
TWI38G1553 Tripterygium wilfordii HOM05D007576 ORTHO05D009576 1.5e-99 368.2 790 35.8
MD05G1314800 Malus domestica HOM05D007576 ORTHO05D009576 2.0e-99 367.9 759 35.6
Cpa.g.sc1598.2 Carica papaya HOM05D007576 ORTHO05D009576 3.4e-99 367.1 760 36.4
FAN16G1901 Fragaria x ananassa HOM05D007576 ORTHO05D009576 7.6e-99 365.9 727 37.1
RhsimUnG0044800 Rhododendron simsii HOM05D007576 ORTHO05D009576 7.6e-99 365.9 731 37.3
CiPaw.09G057800 Carya illinoinensis HOM05D007576 ORTHO05D009576 9.9e-99 365.5 751 37.2
FvH4_3g04910 Fragaria vesca HOM05D007576 ORTHO05D009576 1.7e-98 364.8 727 36.7
Medtr4g113740 Medicago truncatula HOM05D007576 ORTHO05D009576 2.2e-98 364.4 755 35.1
VMungo1215G0476 Vigna mungo HOM05D007576 ORTHO05D009576 6.4e-98 362.8 761 34.6
FAN11G2000 Fragaria x ananassa HOM05D007576 ORTHO05D009576 8.4e-98 362.5 727 36.5
FAN25G3788 Fragaria x ananassa HOM05D007576 ORTHO05D009576 8.4e-98 362.5 727 36.9
Hund21235 Selenicereus undatus HOM05D007576 ORTHO05D009576 1.9e-97 361.3 783 33.6
AUR62014798 Chenopodium quinoa HOM05D007576 ORTHO05D009576 2.4e-97 360.9 784 35.3
CANSAT35G0220 Cannabis sativa HOM05D007576 ORTHO05D009576 3.2e-97 360.5 734 36.1
Sc05g0007790 Simmondsia chinensis HOM05D007576 ORTHO05D009576 4.1e-97 360.1 770 34.9
Lalb_Chr13g0302021 Lupinus albus HOM05D007576 ORTHO05D009576 5.4e-97 359.8 737 34.3
Ca_21702_v3 Cicer arietinum L. HOM05D007576 ORTHO05D009576 9.2e-97 359.0 738 35.9
Lj1A1207T83 Lonicera japonica HOM05D007576 ORTHO05D009576 2.1e-96 357.8 785 36.1
Phvul.003G161900 Phaseolus vulgaris HOM05D007576 ORTHO05D009576 2.1e-96 357.8 768 34.9
Ciclev10014397m.g Citrus clementina HOM05D007576 ORTHO05D009576 4.6e-96 356.7 732 36.9
COL.COLO4_31497 Corchorus olitorius HOM05D007576 ORTHO05D009576 4.6e-96 356.7 744 35.8
arahy.Tifrunner.gnm1.ann1.TJX0PA Arachis hypogaea HOM05D007576 ORTHO05D009576 2.3e-95 354.4 739 36.1
Gohir.A06G126300 Gossypium hirsutum HOM05D007576 ORTHO05D009576 8.6e-95 352.4 735 34.7
Sed0017500 Sechium edule HOM05D007576 ORTHO05D009576 2.5e-94 350.9 753 35.6
Gorai.010G153000 Gossypium raimondii HOM05D007576 ORTHO05D009576 3.3e-94 350.5 743 35.1
SalBow8G3709 Salvia bowleyana HOM05D007576 ORTHO05D009576 2.1e-93 347.8 725 36.0
EL10Ac8g20358 Beta vulgaris HOM05D007576 ORTHO05D009576 3.6e-93 347.1 732 33.3
arahy.Tifrunner.gnm1.ann1.TJT9YV Arachis hypogaea HOM05D007576 ORTHO05D009576 8.1e-93 345.9 776 34.5
DCAR_008044 Daucus carota HOM05D007576 ORTHO05D009576 1.1e-92 345.5 732 35.9
Gohir.D06G131100 Gossypium hirsutum HOM05D007576 ORTHO05D009576 1.1e-92 345.5 743 34.9
Lj4g0015142 Lotus japonicus HOM05D007576 ORTHO05D009576 1.4e-92 345.1 760 33.2
Ah.14g089350 Amaranthus hybridus HOM05D007576 ORTHO05D009576 5.2e-92 343.2 773 34.7
MSTRG.15916 Avicennia marina HOM05D007576 ORTHO05D009576 5.2e-92 343.2 755 34.0
Lsat_1_v5_gn_4_52541 Lactuca sativa HOM05D007576 ORTHO05D009576 4.9e-90 336.7 746 35.5
Prupe.4G044400 Prunus persica HOM05D007576 ORTHO05D009576 1.9e-89 334.7 773 34.4
SGA_v2.0_scaffold7G03972 Striga asiatica HOM05D007576 ORTHO05D009576 2.1e-88 331.3 731 35.3
Sopen02g023320 Solanum pennellii HOM05D007576 ORTHO05D009576 3.5e-88 330.5 758 35.1
Nitab4.5_0001357g0010 Nicotiana tabacum HOM05D007576 ORTHO05D009576 1.7e-87 328.2 758 35.9
Nitab4.5_0009493g0040 Nicotiana tabacum HOM05D007576 ORTHO05D009576 3.0e-87 327.4 760 35.7
Migut.M01192 Erythranthe guttata HOM05D007576 ORTHO05D009576 8.7e-87 325.9 734 34.2
Os06g0731700 Oryza sativa ssp. japonica HOM05D007576 ORTHO05D009576 7.3e-86 322.8 296 58.1
PGR042G0577 Punica granatum HOM05D007576 ORTHO05D009576 1.3e-85 322.0 750 34.8
PGSC0003DMG400022439 Solanum tuberosum HOM05D007576 ORTHO05D009576 1.3e-85 322.0 756 35.2
Zm00001eb229030 Zea mays HOM05D007576 ORTHO05D009576 1.4e-84 318.5 392 50.8
ECA234G2395 Erigeron canadensis HOM05D007576 ORTHO05D009576 1.4e-81 308.5 717 35.0
CAN.G1164.10 Capsicum annuum HOM05D007576 ORTHO05D009576 1.9e-81 308.1 765 34.1
CDE01G0107 Ceratophyllum demersum HOM05D007576 ORTHO05D009576 2.1e-80 304.7 643 35.9
HanXRQChr16g0518181 Helianthus annuus HOM05D007576 ORTHO05D009576 1.0e-79 302.4 284 60.6
Cc02_g13130 Coffea canephora HOM05D007576 ORTHO05D009576 1.3e-79 302.0 728 34.6
PSO541G6317 Papaver somniferum HOM05D007576 ORTHO05D009576 6.7e-79 299.7 311 53.4
GSVIVG01002036001 Vitis vinifera HOM05D007576 ORTHO05D009576 2.1e-77 294.7 312 54.8
TPR.G10703 Trifolium pratense HOM05D007576 ORTHO05D009576 1.5e-75 288.5 309 53.1
Peaxi162Scf00947g00422 Petunia axillaris HOM05D007576 ORTHO05D009576 1.7e-74 285.0 302 54.6
ATR0680G038 Amborella trichopoda HOM05D007576 ORTHO05D009576 1.4e-73 282.0 367 46.0
Oeu038219.1 Olea europaea HOM05D007576 ORTHO05D009576 2.7e-72 277.7 242 61.2
Haze_06496 Corylus avellana HOM05D007576 ORTHO05D009576 3.9e-71 273.9 686 33.1
CSS0010553 Camellia sinensis var. sinensis HOM05D007576 ORTHO05D009576 6.9e-60 236.5 755 30.9
Mapoly0181s0007 Marchantia polymorpha HOM05D007576 ORTHO05D009576 4.1e-52 210.7 276 44.6
Pp3c11_25570 Physcomitrium patens HOM05D007576 ORTHO05D009576 1.5e-51 208.8 281 45.9
Ciclev10008775m.g Citrus clementina HOM05D007576 ORTHO05D009576 2.7e-48 198.0 256 48.0
Duzib235G0673 Durio zibethinus HOM05D007576 ORTHO05D009576 2.0e-38 165.2 153 57.5
Atru.chr10.1919 Acer truncatum HOM05D007576 ORTHO05D009576 7.4e-38 163.3 576 28.1
Ciclev10009735m.g Citrus clementina HOM05D007576 ORTHO05D009576 2.5e-33 148.3 157 54.8
CBR_g49326 Chara braunii HOM05D007576 ORTHO05D000002 1.6e-24 119.0 216 38.4
Solyc02g078470.4 Solanum lycopersicum HOM05D007576 ORTHO05D009576 2.0e-22 112.1 100 57.0
SEGI_32076 Sequoiadendron giganteum HOM05D007576 ORTHO05D009576 3.6e-16 91.3 87 50.6
ECA247G2871 Erigeron canadensis HOM05D000526 ORTHO05D000956 2.3e-15 88.6 74 59.5
Lj2g0021670 Lotus japonicus HOM05D007576 ORTHO05D009576 3.0e-15 88.2 110 48.2
Cre13.g589167 Chlamydomonas reinhardtii HOM05D007576 ORTHO05D009576 1.1e-12 79.7 253 28.5
Atru.chr10.1928 Acer truncatum HOM05D007576 ORTHO05D009576 9.5e-09 66.6 87 44.8
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 2.8e-08 65.1 119 34.5
QL05p034837 Quercus lobata HOM05D007576 ORTHO05D009576 2.0e-06 58.9 62 43.5


User provided reference genes

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