Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014792 Vanilla planifolia HOM05D007178 ORTHO05D009022 1.0e-76 290.0 152 100.0
Phvul.004G171100 Phaseolus vulgaris HOM05D007178 ORTHO05D009022 1.7e-18 96.7 72 66.7
Glyma.07G128900 Glycine max HOM05D007178 ORTHO05D009022 2.2e-18 96.3 72 68.1
Atru.chr10.1132 Acer truncatum HOM05D007178 ORTHO05D009022 4.9e-18 95.1 67 71.6
CsaV3_6G051920 Cucumis sativus L. HOM05D007178 ORTHO05D009022 4.9e-18 95.1 68 69.1
Aqoxy4G00077 Aquilegia oxysepala HOM05D007178 ORTHO05D009022 6.3e-18 94.7 69 65.2
MELO3C007115.2 Cucumis melo HOM05D007178 ORTHO05D009022 6.3e-18 94.7 68 69.1
Glyma.01G003100 Glycine max HOM05D007178 ORTHO05D009022 8.3e-18 94.4 69 68.1
ClCG01G024800 Citrullus lanatus HOM05D007178 ORTHO05D009022 1.1e-17 94.0 67 70.1
Sed0021444 Sechium edule HOM05D007178 ORTHO05D009022 4.1e-17 92.0 67 68.7
Dinv32223 Davidia involucrata HOM05D007178 ORTHO05D009022 7.0e-17 91.3 63 66.7
Nn3g20425 Nelumbo nucifera HOM05D007178 ORTHO05D009022 7.0e-17 91.3 75 65.3
GSVIVG01021533001 Vitis vinifera HOM05D007178 ORTHO05D009022 7.0e-17 91.3 68 66.2
Dinv21533 Davidia involucrata HOM05D007178 ORTHO05D009022 9.2e-17 90.9 68 66.2
Psat1g049440 Pisum sativum HOM05D007178 ORTHO05D009022 1.2e-16 90.5 72 62.5
PGR083G2020 Punica granatum HOM05D007178 ORTHO05D009022 1.2e-16 90.5 69 65.2
TPR.G35503 Trifolium pratense HOM05D007178 ORTHO05D009022 1.2e-16 90.5 72 62.5
TAR460G0007 Trochodendron aralioides HOM05D007178 ORTHO05D009022 1.2e-16 90.5 69 66.7
CiPaw.09G121000 Carya illinoinensis HOM05D007178 ORTHO05D009022 1.6e-16 90.1 67 67.2
Manes.17G073200 Manihot esculenta HOM05D007178 ORTHO05D009022 1.6e-16 90.1 67 68.7
Lj2g0013550 Lotus japonicus HOM05D007178 ORTHO05D009022 2.0e-16 89.7 72 59.7
Hund17773 Selenicereus undatus HOM05D007178 ORTHO05D009022 2.0e-16 89.7 71 64.8
CDE11G0374 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 2.7e-16 89.4 69 65.2
TWI73G0655 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 2.7e-16 89.4 71 60.6
Cpa.g.sc17.33 Carica papaya HOM05D007178 ORTHO05D009022 3.5e-16 89.0 67 70.1
CDE05G0627 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 3.5e-16 89.0 69 63.8
Os09g0569450 Oryza sativa ssp. japonica HOM05D007178 ORTHO05D009022 4.5e-16 88.6 90 57.8
vmacro03352 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 4.5e-16 88.6 68 64.7
Ciclev10017932m.g Citrus clementina HOM05D007178 ORTHO05D009022 1.0e-15 87.4 67 67.2
TWI09G0402 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 1.0e-15 87.4 67 64.2
CANSAT35G0370 Cannabis sativa HOM05D007178 ORTHO05D009022 1.3e-15 87.0 68 63.2
CiPaw.10G089700 Carya illinoinensis HOM05D007178 ORTHO05D009022 1.3e-15 87.0 67 64.2
Gohir.A06G196500 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.3e-15 87.0 67 65.7
Gohir.D06G204000 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.3e-15 87.0 67 65.7
Gorai.010G238000 Gossypium raimondii HOM05D007178 ORTHO05D009022 1.3e-15 87.0 67 65.7
THA.LOC104798400 Tarenaya hassleriana HOM05D007178 ORTHO05D009022 1.3e-15 87.0 68 66.2
Lalb_Chr22g0349731 Lupinus albus HOM05D007178 ORTHO05D009022 1.7e-15 86.7 69 62.3
QL05p055487 Quercus lobata HOM05D007178 ORTHO05D009022 1.7e-15 86.7 67 65.7
Sc05g0006030 Simmondsia chinensis HOM05D007178 ORTHO05D009022 1.7e-15 86.7 68 66.2
Solyc08g022120.3 Solanum lycopersicum HOM05D007178 ORTHO05D009022 2.3e-15 86.3 67 67.2
Sopen08g007660 Solanum pennellii HOM05D007178 ORTHO05D009022 2.3e-15 86.3 67 67.2
DCAR_027898 Daucus carota HOM05D007178 ORTHO05D009022 2.9e-15 85.9 68 64.7
CSS0006510 Camellia sinensis var. sinensis HOM05D007178 ORTHO05D009022 3.8e-15 85.5 71 63.4
Ah.14g086320 Amaranthus hybridus HOM05D007178 ORTHO05D009022 5.0e-15 85.1 67 67.2
ECA234G3634 Erigeron canadensis HOM05D007178 ORTHO05D009022 5.0e-15 85.1 68 64.7
Duzib235G1408 Durio zibethinus HOM05D007178 ORTHO05D009022 6.6e-15 84.7 67 62.7
Lalb_Chr14g0375331 Lupinus albus HOM05D007178 ORTHO05D009022 6.6e-15 84.7 69 60.9
Thecc.06G146700 Theobroma cacao HOM05D007178 ORTHO05D009022 6.6e-15 84.7 67 62.7
AL7G35950 Arabidopsis lyrata HOM05D007178 ORTHO05D009022 1.1e-14 84.0 69 65.2
CARHR225220 Cardamine hirsuta HOM05D007178 ORTHO05D009022 1.1e-14 84.0 69 65.2
Duzib160G0207 Durio zibethinus HOM05D007178 ORTHO05D009022 1.1e-14 84.0 67 62.7
Gohir.A10G042700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.5e-14 83.6 72 62.5
Gohir.D10G043700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.5e-14 83.6 72 62.5
PSO541G3638 Papaver somniferum HOM05D007178 ORTHO05D009022 1.5e-14 83.6 69 60.9
PSO675G4358 Papaver somniferum HOM05D007178 ORTHO05D009022 1.5e-14 83.6 69 60.9
Cfa000915 Carpinus fangiana HOM05D007178 ORTHO05D009022 1.9e-14 83.2 67 62.7
unitig_26.g9766 Utricularia gibba HOM05D007178 ORTHO05D009022 1.9e-14 83.2 88 53.4
Lsat_1_v5_gn_4_29580 Lactuca sativa HOM05D007178 ORTHO05D009022 2.5e-14 82.8 68 63.2
MBI18_g11238_MAGBIO Magnolia biondii HOM05D007178 ORTHO05D009022 2.5e-14 82.8 69 59.4
EL10Ac8g19636 Beta vulgaris HOM05D007178 ORTHO05D009022 3.3e-14 82.4 68 61.8
Nitab4.5_0000315g0010 Nicotiana tabacum HOM05D007178 ORTHO05D009022 3.3e-14 82.4 67 62.7
Gorai.011G046500 Gossypium raimondii HOM05D007178 ORTHO05D009022 5.6e-14 81.6 91 52.7
AT4G18400 Arabidopsis thaliana HOM05D007178 ORTHO05D009022 7.3e-14 81.3 68 64.7
Cc00_g05770 Coffea canephora HOM05D007178 ORTHO05D009022 7.3e-14 81.3 86 52.3
Nitab4.5_0005655g0060 Nicotiana tabacum HOM05D007178 ORTHO05D009022 7.3e-14 81.3 67 62.7
Carub.0007s2286 Capsella rubella HOM05D007178 ORTHO05D009022 9.5e-14 80.9 69 63.8
Peaxi162Scf00045g02430 Petunia axillaris HOM05D007178 ORTHO05D009022 1.2e-13 80.5 64 60.9
Potri.004G133260 Populus trichocarpa HOM05D007178 ORTHO05D009022 1.6e-13 80.1 103 46.6
Sp7g15630 Schrenkiella parvula HOM05D007178 ORTHO05D009022 1.6e-13 80.1 71 62.0
arahy.Tifrunner.gnm1.ann1.KYL6KL Arachis hypogaea HOM05D007178 ORTHO05D009022 2.1e-13 79.7 67 64.2
A03p51260 Brassica napus HOM05D007178 ORTHO05D009022 2.1e-13 79.7 69 66.7
BraA03t14208Z Brassica rapa HOM05D007178 ORTHO05D009022 2.1e-13 79.7 69 66.7
MD05G1280800 Malus domestica HOM05D007178 ORTHO05D009022 2.1e-13 79.7 67 61.2
VMungo0464G0906 Vigna mungo HOM05D007178 ORTHO05D009022 2.8e-13 79.3 48 77.1
Zm00001eb307790 Zea mays HOM05D007178 ORTHO05D009022 2.8e-13 79.3 75 61.3
BcaNung00005 Brassica carinata HOM05D007178 ORTHO05D009022 3.6e-13 79.0 68 63.2
Thhalv10026632m.g Eutrema salsugineum HOM05D007178 ORTHO05D009022 3.6e-13 79.0 68 63.2
Prupe.4G084100 Prunus persica HOM05D007178 ORTHO05D009022 3.6e-13 79.0 67 61.2
BraA01t00981Z Brassica rapa HOM05D007178 ORTHO05D009022 4.7e-13 78.6 68 61.8
MD10G1259200 Malus domestica HOM05D007178 ORTHO05D009022 4.7e-13 78.6 66 60.6
A01p10340 Brassica napus HOM05D007178 ORTHO05D009022 8.0e-13 77.8 68 61.8
BolC1t01205H Brassica oleracea HOM05D007178 ORTHO05D009022 8.0e-13 77.8 68 61.8
COL.COLO4_31031 Corchorus olitorius HOM05D007178 ORTHO05D009022 1.0e-12 77.4 62 64.5
BcaC09g51519 Brassica carinata HOM05D007178 ORTHO05D009022 1.8e-12 76.6 68 60.3
C01p12290 Brassica napus HOM05D007178 ORTHO05D009022 1.8e-12 76.6 68 60.3
BcaC06g30589 Brassica carinata HOM05D007178 ORTHO05D009022 6.8e-12 74.7 65 60.0
arahy.Tifrunner.gnm1.ann1.WWKL6Q Arachis hypogaea HOM05D007178 ORTHO05D009022 8.9e-12 74.3 42 78.6
Migut.M00887 Erythranthe guttata HOM05D007178 ORTHO05D009022 8.9e-12 74.3 72 58.3
FvH4_3g05190 Fragaria vesca HOM05D007178 ORTHO05D009022 1.5e-11 73.6 67 56.7
FAN16G3072 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.5e-11 73.6 67 56.7
FAN21G4020 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.5e-11 73.6 67 56.7
RcHm_v2.0_Chr5g0014561 Rosa chinensis HOM05D007178 ORTHO05D009022 1.5e-11 73.6 67 56.7
FAN25G1793 Fragaria x ananassa HOM05D007178 ORTHO05D009022 2.0e-11 73.2 67 56.7
Actinidia13672 Actinidia chinensis HOM05D007178 ORTHO05D009022 4.4e-11 72.0 44 77.3
Medtr8g006645 Medicago truncatula HOM05D007178 ORTHO05D009022 7.5e-11 71.2 78 53.8
ATR1098G109 Amborella trichopoda HOM05D007178 ORTHO05D009022 2.9e-10 69.3 63 55.6
SGA_v2.0_scaffold1G00199 Striga asiatica HOM05D007178 ORTHO05D009022 4.9e-10 68.6 72 55.6
HanXRQChr07g0199391 Helianthus annuus HOM05D007178 ORTHO05D009022 1.8e-09 66.6 68 57.4
vmacro05543 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 5.4e-09 65.1 77 48.1
FvH4_7g10051 Fragaria vesca HOM05D007178 ORTHO05D009022 7.0e-09 64.7 43 67.4
FAN11G0307 Fragaria x ananassa HOM05D007178 ORTHO05D009022 7.8e-08 61.2 62 51.6
Ah.13g071740 Amaranthus hybridus HOM05D007178 ORTHO05D009022 1.3e-07 60.5 46 67.4
Aa31LG6G1110 Aethionema arabicum HOM05D007178 ORTHO05D009022 1.7e-07 60.1 63 57.1
FvH4_6g47640 Fragaria vesca HOM05D007178 ORTHO05D009022 3.0e-07 59.3 42 64.3
FAN14G2280 Fragaria x ananassa HOM05D007178 ORTHO05D009022 8.6e-07 57.8 42 61.9
FvH4_3g19851 Fragaria vesca HOM05D007178 ORTHO05D009022 1.9e-06 56.6 40 62.5
Actinidia33661 Actinidia chinensis HOM05D007178 ORTHO05D009022 3.3e-06 55.8 68 48.5
SEGI_20805 Sequoiadendron giganteum HOM05D019012 ORTHO05D020434 7.3e-06 54.7 83 37.3


User provided reference genes

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