Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 2.2e-171 605.5 305 100.0
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 6.5e-46 188.7 319 38.9
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.0e-43 179.9 316 38.0
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 1.3e-41 174.5 305 37.7
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.2e-41 173.7 316 37.3
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 5.3e-40 169.1 308 37.3
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 5.3e-40 169.1 313 39.0
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 6.9e-40 168.7 317 38.2
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 1.0e-38 164.9 307 35.8
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 1.0e-38 164.9 302 37.4
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 2.2e-38 163.7 298 37.6
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 2.9e-38 163.3 305 36.1
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.9e-38 163.3 316 36.7
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 5.0e-38 162.5 310 37.1
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 8.5e-38 161.8 286 37.4
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 8.5e-38 161.8 316 36.7
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 1.4e-37 161.0 318 37.4
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 1.4e-37 161.0 317 34.7
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 1.9e-37 160.6 306 38.6
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.5e-37 160.2 303 35.0
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 2.5e-37 160.2 309 36.9
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 7.2e-37 158.7 317 37.2
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.6e-36 157.5 301 35.9
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.6e-36 157.5 305 35.4
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 2.1e-36 157.1 290 38.3
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 4.6e-36 156.0 317 34.4
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 7.9e-36 155.2 307 35.2
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 5.1e-35 152.5 306 35.3
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 3.3e-34 149.8 308 36.0
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 5.7e-34 149.1 314 36.6
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 7.4e-34 148.7 307 35.8
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 7.4e-34 148.7 319 35.1
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 1.7e-33 147.5 299 36.8
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 1.8e-32 144.1 306 35.9
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 2.4e-32 143.7 301 34.2
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 4.1e-32 142.9 303 36.0
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 4.1e-32 142.9 310 34.5
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 4.1e-32 142.9 308 36.0
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 2.0e-31 140.6 318 36.2
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 2.0e-31 140.6 318 33.3
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 2.0e-31 140.6 302 35.4
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 2.6e-31 140.2 283 37.1
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 3.4e-31 139.8 307 34.2
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 3.4e-31 139.8 309 34.0
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 4.5e-31 139.4 277 37.9
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 5.9e-31 139.0 324 34.9
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 5.9e-31 139.0 294 32.3
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 7.7e-31 138.7 328 35.1
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 7.7e-31 138.7 311 34.7
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 7.7e-31 138.7 294 34.0
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 1.3e-30 137.9 329 32.8
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 1.3e-30 137.9 295 35.3
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 1.7e-30 137.5 301 34.2
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 2.2e-30 137.1 323 35.3
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 2.9e-30 136.7 311 34.1
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 3.8e-30 136.3 318 35.5
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 5.0e-30 136.0 322 34.2
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 6.5e-30 135.6 314 35.4
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 8.5e-30 135.2 298 34.2
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.1e-29 134.8 315 33.0
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.1e-29 134.8 306 32.4
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 4.2e-29 132.9 317 35.0
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 5.5e-29 132.5 308 32.8
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 5.5e-29 132.5 300 31.7
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 5.5e-29 132.5 312 33.0
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 9.4e-29 131.7 303 34.3
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 9.4e-29 131.7 313 32.9
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 9.4e-29 131.7 291 35.1
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 9.4e-29 131.7 297 32.7
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 9.4e-29 131.7 311 34.4
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 9.4e-29 131.7 309 33.0
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.2e-28 131.3 299 34.8
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.2e-28 131.3 320 33.1
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.6e-28 131.0 295 33.9
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 1.6e-28 131.0 319 32.6
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 1.6e-28 131.0 290 36.9
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 1.6e-28 131.0 314 32.2
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 2.1e-28 130.6 314 34.7
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 2.1e-28 130.6 299 32.8
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 4.7e-28 129.4 324 34.0
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.7e-28 129.4 311 33.4
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 6.1e-28 129.0 312 34.3
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 8.0e-28 128.6 291 33.7
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 8.0e-28 128.6 291 35.1
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 1.0e-27 128.3 311 33.8
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.0e-27 128.3 312 34.0
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.4e-27 127.9 276 35.9
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.3e-27 127.1 311 33.8
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.3e-27 127.1 312 34.0
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 3.0e-27 126.7 308 31.8
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.2e-27 125.9 294 32.7
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 6.7e-27 125.6 310 33.2
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 6.7e-27 125.6 294 35.4
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 6.7e-27 125.6 295 33.6
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 8.8e-27 125.2 314 33.4
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.1e-26 124.8 285 34.4
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.1e-26 124.8 291 32.6
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.5e-26 124.4 288 34.4
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 2.0e-26 124.0 265 35.1
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 2.6e-26 123.6 303 31.0
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 2.6e-26 123.6 292 34.2
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 2.6e-26 123.6 305 33.8
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 3.3e-26 123.2 308 34.1
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 7.4e-26 122.1 290 33.1
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 1.3e-25 121.3 291 33.3
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.7e-25 120.9 297 35.4
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 1.7e-25 120.9 290 30.0
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 8.2e-25 118.6 283 34.6
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 1.4e-24 117.9 300 32.0
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 1.4e-24 117.9 275 34.2
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 4.1e-24 116.3 281 31.7
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 1.2e-23 114.8 249 34.9
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 1.2e-23 114.8 292 33.9
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 1.6e-23 114.4 309 32.4
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 2.0e-23 114.0 311 33.4
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 3.5e-23 113.2 304 33.9
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 4.5e-23 112.8 263 34.6
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 7.7e-23 112.1 296 28.7
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 7.7e-23 112.1 266 33.1
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.3e-22 111.3 287 32.1
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.3e-22 111.3 299 30.1
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 2.2e-22 110.5 282 30.9
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 2.9e-22 110.2 296 28.7
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 3.8e-22 109.8 317 31.2
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.0e-22 109.4 288 31.2
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.1e-21 108.2 290 30.3
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 1.5e-21 107.8 187 38.0
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.5e-21 107.8 298 31.9
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 1.9e-21 107.5 297 31.3
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 9.4e-21 105.1 275 32.0
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 9.4e-21 105.1 300 30.3
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.6e-20 104.4 290 29.0
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.7e-20 103.6 304 29.3
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 6.1e-20 102.4 268 33.6
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 1.0e-19 101.7 362 29.0
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-19 101.3 287 27.5
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 1.8e-19 100.9 287 27.5
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 2.3e-19 100.5 310 29.7
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 2.3e-19 100.5 268 34.0
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 3.0e-19 100.1 297 28.3
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 1.2e-18 98.2 284 29.6
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 1.2e-18 98.2 284 29.6
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 1.3e-17 94.7 299 29.8
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.3e-17 94.7 291 30.2
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 1.3e-17 94.7 257 30.7
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 2.8e-17 93.6 301 29.6
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 4.8e-17 92.8 299 30.1
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 4.8e-17 92.8 284 28.9
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 4.8e-17 92.8 299 30.1
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 6.3e-17 92.4 287 27.9
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 6.3e-17 92.4 287 27.9
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 1.4e-16 91.3 299 29.4
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 1.4e-16 91.3 251 31.1
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 1.4e-16 91.3 297 27.9
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 4.1e-16 89.7 304 28.0
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 5.3e-16 89.4 166 34.9
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 9.1e-16 88.6 307 28.7
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 1.2e-15 88.2 285 28.4
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 4.5e-15 86.3 109 41.3
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 3.2e-13 80.1 243 29.6
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 4.2e-13 79.7 283 28.3
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 5.5e-13 79.3 267 29.2
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 1.2e-12 78.2 298 26.5
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 6.1e-12 75.9 298 27.9
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 8.8e-11 72.0 228 29.4
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 1.2e-10 71.6 235 27.7
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 1.7e-09 67.8 262 27.9
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 1.7e-09 67.8 294 21.4
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 1.1e-08 65.1 148 27.7
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 1.4e-08 64.7 148 27.7
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 1.6e-07 61.2 272 25.0
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 1.6e-07 61.2 254 28.0
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.5e-07 60.1 168 31.5
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 3.8e-06 56.6 80 31.2


User provided reference genes

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