Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014711 Vanilla planifolia HOM05D000290 ORTHO05D051561 8.9e-84 313.5 155 100.0
HPP92_028088 Vanilla planifolia HOM05D000290 ORTHO05D051561 5.6e-54 214.5 132 83.3
Aqoxy1G01252 Aquilegia oxysepala HOM05D000290 ORTHO05D007415 1.3e-13 80.5 141 34.0
FAN06G5088 Fragaria x ananassa HOM05D000290 ORTHO05D007415 1.6e-13 80.1 144 34.7
FvH4_7g19760 Fragaria vesca HOM05D000290 ORTHO05D007415 2.8e-13 79.3 144 34.7
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.2e-11 73.9 141 34.8
Hma1.2p1_0063F.1_g034380 Hydrangea macrophylla HOM05D000290 ORTHO05D007415 1.2e-11 73.9 141 35.5
Atru.chr12.734 Acer truncatum HOM05D000290 ORTHO05D007415 2.6e-11 72.8 141 31.9
FAN03G2244 Fragaria x ananassa HOM05D000290 ORTHO05D007415 2.6e-11 72.8 144 33.3
RcHm_v2.0_Chr1g0363651 Rosa chinensis HOM05D000290 ORTHO05D007415 2.6e-11 72.8 144 32.6
Eucgr.G02820 Eucalyptus grandis HOM05D000290 ORTHO05D007415 5.9e-11 71.6 141 32.6
Ciclev10030711m.g Citrus clementina HOM05D000290 ORTHO05D007415 2.9e-10 69.3 136 32.4
Cfa001614 Carpinus fangiana HOM05D000290 ORTHO05D007415 5.0e-10 68.6 137 30.7
CiPaw.02G174700 Carya illinoinensis HOM05D000290 ORTHO05D007415 5.0e-10 68.6 141 30.5
Nn2g10759 Nelumbo nucifera HOM05D000290 ORTHO05D007415 8.5e-10 67.8 119 34.5
TAR636G1312 Trochodendron aralioides HOM05D000290 ORTHO05D007415 8.5e-10 67.8 141 31.2
CANSAT56G0046 Cannabis sativa HOM05D000290 ORTHO05D007415 1.1e-09 67.4 143 30.8
Oeu034811.1 Olea europaea HOM05D000290 ORTHO05D007415 2.5e-09 66.2 147 29.9
GSVIVG01016296001 Vitis vinifera HOM05D000290 ORTHO05D007415 3.2e-09 65.9 140 34.3
MSTRG.369 Avicennia marina HOM05D000290 ORTHO05D007415 9.4e-09 64.3 128 32.0
PSO339G6283 Papaver somniferum HOM05D000290 ORTHO05D007415 9.4e-09 64.3 144 31.2
Manes.07G104400 Manihot esculenta HOM05D000290 ORTHO05D007415 1.6e-08 63.5 139 30.9
Medtr1g095480 Medicago truncatula HOM05D000290 ORTHO05D007415 1.6e-08 63.5 146 30.1
TWI63G0995 Tripterygium wilfordii HOM05D000290 ORTHO05D007415 1.6e-08 63.5 138 31.2
Cpa.g.sc53.63 Carica papaya HOM05D000290 ORTHO05D007415 2.7e-08 62.8 144 27.1
Lj5g0003555 Lotus japonicus HOM05D000290 ORTHO05D007415 3.6e-08 62.4 138 27.5
MD07G1176000 Malus domestica HOM05D000290 ORTHO05D007415 3.6e-08 62.4 139 28.1
CSS0015563 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 7.9e-08 61.2 137 28.5
CSS0025800 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 7.9e-08 61.2 137 28.5
Cc09_g02000 Coffea canephora HOM05D000290 ORTHO05D007415 1.0e-07 60.8 142 33.8
HanXRQChr09g0246431 Helianthus annuus HOM05D000290 ORTHO05D007415 1.4e-07 60.5 142 33.1
Duzib106G1672 Durio zibethinus HOM05D000290 ORTHO05D007415 1.8e-07 60.1 143 27.3
DCAR_006445 Daucus carota HOM05D000290 ORTHO05D007415 3.9e-07 58.9 136 26.5
Aa31LG5G20180 Aethionema arabicum HOM05D000290 ORTHO05D007415 6.7e-07 58.2 141 27.0
COL.COLO4_23704 Corchorus olitorius HOM05D000290 ORTHO05D007415 6.7e-07 58.2 142 28.2
PSO063G6866 Papaver somniferum HOM05D000290 ORTHO05D007415 6.7e-07 58.2 137 30.7
Thecc.10G071500 Theobroma cacao HOM05D000290 ORTHO05D007415 6.7e-07 58.2 141 29.8
Glyma.20G179100 Glycine max HOM05D000290 ORTHO05D007415 8.8e-07 57.8 149 26.8
Potri.010G221000 Populus trichocarpa HOM05D000290 ORTHO05D007415 8.8e-07 57.8 130 32.3
Zm00001eb258280 Zea mays HOM05D000290 ORTHO05D007415 1.1e-06 57.4 126 30.2
Rhsim03G0124000 Rhododendron simsii HOM05D000290 ORTHO05D007415 1.5e-06 57.0 130 31.5
Rhsim03G0124100 Rhododendron simsii HOM05D000290 ORTHO05D007415 1.5e-06 57.0 130 31.5
Haze_16906 Corylus avellana HOM05D000290 ORTHO05D007415 2.0e-06 56.6 132 28.8
PGR142G4180 Punica granatum HOM05D000290 ORTHO05D007415 2.5e-06 56.2 137 29.9
Os02g0805800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007415 3.3e-06 55.8 138 29.7
Migut.F01770 Erythranthe guttata HOM05D000290 ORTHO05D007415 4.3e-06 55.5 137 27.7
Lj1A916G22 Lonicera japonica HOM05D000290 ORTHO05D007415 4.3e-06 55.5 138 30.4
Sabra10G0170700 Salix brachista HOM05D000290 ORTHO05D007415 7.4e-06 54.7 126 29.4
Glyma.10G212000 Glycine max HOM05D000290 ORTHO05D007415 9.7e-06 54.3 149 25.5


User provided reference genes

Program Settings