Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 2.4e-203 711.8 336 100.0
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 2.1e-146 522.7 317 77.3
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 4.6e-146 521.5 295 81.0
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 2.0e-144 516.2 295 79.7
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 4.8e-143 511.5 302 78.8
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.8e-143 511.5 302 78.8
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.8e-143 511.5 302 78.8
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.3e-143 511.1 302 79.1
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 6.3e-143 511.1 320 75.3
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.1e-142 510.4 306 75.2
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.4e-142 510.0 326 74.2
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-142 509.2 302 78.5
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 4.1e-142 508.4 295 78.3
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 5.3e-142 508.1 301 76.1
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 6.9e-142 507.7 304 77.6
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.5e-141 506.5 302 78.1
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.0e-141 506.1 295 78.3
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 2.6e-141 505.8 292 79.5
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 3.4e-141 505.4 304 77.0
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.4e-141 505.4 302 77.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.5e-141 505.0 294 79.3
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.9e-141 504.6 293 79.5
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.7e-140 503.1 291 79.4
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.7e-140 503.1 295 77.6
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 3.8e-140 501.9 295 76.9
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 3.8e-140 501.9 309 75.7
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 3.8e-140 501.9 292 78.4
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 5.0e-140 501.5 309 74.4
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 5.0e-140 501.5 333 70.6
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.1e-139 500.4 295 77.3
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.2e-139 498.8 298 77.5
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 3.2e-139 498.8 319 73.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 3.2e-139 498.8 318 72.6
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.5e-139 498.0 295 78.0
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 5.5e-139 498.0 328 71.3
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 5.5e-139 498.0 295 76.9
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 7.2e-139 497.7 314 73.2
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 9.4e-139 497.3 303 75.2
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.6e-138 496.5 303 74.9
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 2.1e-138 496.1 293 78.2
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.1e-138 496.1 295 76.6
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.7e-138 495.7 319 73.4
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 3.6e-138 495.4 340 70.9
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 4.7e-138 495.0 295 76.3
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 6.1e-138 494.6 313 74.8
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 6.1e-138 494.6 307 74.9
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 7.9e-138 494.2 291 78.0
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 7.9e-138 494.2 295 77.3
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.4e-137 493.4 320 72.2
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.3e-137 492.7 296 77.4
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 3.9e-137 491.9 295 77.3
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.7e-137 491.1 292 77.1
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 6.7e-137 491.1 295 76.9
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 8.8e-137 490.7 316 71.8
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.5e-136 490.0 295 75.3
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.3e-136 488.8 297 76.8
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 9.7e-136 487.3 306 74.5
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.3e-135 486.9 292 76.7
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 3.7e-135 485.3 296 76.4
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 6.3e-135 484.6 299 74.9
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.8e-134 483.0 329 69.0
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 4.1e-134 481.9 298 74.5
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 9.1e-134 480.7 299 73.9
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 5.9e-133 478.0 295 74.2
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 5.9e-133 478.0 304 73.4
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 5.9e-133 478.0 293 75.4
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.3e-132 476.9 298 74.2
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.9e-132 475.7 344 66.9
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.8e-132 475.3 300 74.0
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.1e-131 473.8 295 74.2
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.1e-131 473.8 295 74.6
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.5e-131 472.6 295 74.6
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 2.1e-130 469.5 309 72.2
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 3.0e-129 465.7 304 71.4
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 8.8e-129 464.2 309 70.9
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.7e-127 458.8 311 69.8
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.7e-127 458.8 311 69.8
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 5.9e-125 451.4 343 63.6
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 2.0e-120 436.4 251 77.7
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.2e-117 427.2 260 74.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.7e-116 423.3 263 73.4
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.1e-115 420.6 250 75.2
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 4.2e-115 418.7 292 65.8
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 2.7e-114 416.0 296 64.9
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.7e-114 416.0 238 79.0
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 4.7e-114 415.2 299 68.2
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 8.0e-114 414.5 263 72.2
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 5.2e-113 411.8 291 63.9
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 6.3e-111 404.8 319 61.1
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.4e-110 402.9 250 73.2
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.4e-110 402.9 238 76.1
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.2e-109 400.6 260 73.8
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.0e-109 399.8 300 63.7
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.8e-108 395.6 238 75.2
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 5.0e-108 395.2 260 70.4
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.1e-102 377.5 226 76.1
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 2.1e-98 363.2 238 73.1
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 3.2e-94 349.4 197 79.7
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 2.0e-88 330.1 205 71.7
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.0e-88 330.1 223 68.6
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.9e-84 315.8 182 77.5
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 8.6e-84 314.7 255 60.4
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 5.1e-68 262.3 311 48.2
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 6.6e-68 261.9 170 69.4
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.1e-67 261.2 335 43.6
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 2.3e-60 236.9 186 64.0
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 1.2e-56 224.6 134 79.1
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.2e-56 224.6 136 76.5
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.4e-56 223.0 171 64.9
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 5.8e-56 222.2 301 41.5
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.5e-43 181.0 274 36.1
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 5.3e-41 172.6 177 57.6
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 5.8e-40 169.1 145 61.4
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 3.2e-38 163.3 281 37.4
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.7e-37 160.2 114 68.4
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 2.2e-34 150.6 262 34.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.0e-28 130.2 279 31.2
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.8e-26 123.6 157 43.3
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 8.8e-20 102.1 77 66.2
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 7.2e-14 82.4 57 68.4
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 9.4e-14 82.0 51 72.5
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.5e-11 74.7 72 51.4
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.7e-10 70.1 42 73.8
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.5e-07 59.3 30 86.7
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.5e-06 58.2 41 63.4


User provided reference genes

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