Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 1.3e-106 389.8 204 100.0
HPP92_014510 Vanilla planifolia HOM05D008080 ORTHO05D010244 3.3e-62 242.3 205 70.2
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 1.1e-33 147.5 120 65.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.4e-33 147.1 168 52.4
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 2.5e-33 146.4 120 64.2
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 9.4e-33 144.4 168 51.2
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.7e-32 142.9 119 63.9
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 6.1e-32 141.7 132 59.1
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.0e-31 141.0 115 64.3
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.3e-31 139.8 113 65.5
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 2.3e-31 139.8 143 57.3
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 8.8e-31 137.9 157 51.6
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 2.0e-30 136.7 122 61.5
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.0e-30 136.7 111 64.9
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.3e-30 135.6 131 57.3
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 7.4e-30 134.8 131 56.5
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 9.7e-30 134.4 113 64.6
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 9.7e-30 134.4 113 61.9
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 3.7e-29 132.5 116 58.6
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.1e-28 131.0 109 63.3
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.1e-28 131.0 109 63.3
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 1.1e-28 131.0 108 64.8
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.4e-28 130.6 110 61.8
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.4e-28 130.6 134 53.7
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 4.1e-28 129.0 109 62.4
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 5.3e-28 128.6 116 58.6
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 5.3e-28 128.6 109 61.5
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 6.9e-28 128.3 114 56.1
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.5e-27 127.1 96 68.8
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.6e-27 126.3 125 54.4
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 4.5e-27 125.6 162 46.9
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 7.7e-27 124.8 125 52.8
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 1.0e-26 124.4 112 58.0
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.7e-26 123.6 119 56.3
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.9e-26 122.9 125 52.8
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 3.8e-26 122.5 116 55.2
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 3.8e-26 122.5 112 60.7
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 8.5e-26 121.3 125 52.0
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.5e-26 121.3 114 56.1
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.9e-25 120.2 116 54.3
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 3.2e-25 119.4 115 54.8
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 4.2e-25 119.0 115 53.9
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 4.2e-25 119.0 115 54.8
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 4.2e-25 119.0 115 53.9
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 4.2e-25 119.0 115 53.9
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 7.2e-25 118.2 113 55.8
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.2e-24 117.5 113 52.2
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 2.1e-24 116.7 115 53.0
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 6.1e-24 115.2 115 53.0
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 6.1e-24 115.2 115 56.5
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 6.1e-24 115.2 119 55.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-22 110.9 105 55.2
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-22 110.2 105 54.3
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-22 110.2 105 54.3
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-22 110.2 105 54.3
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.0e-22 110.2 105 54.3
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.6e-22 109.8 105 54.3
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 9.7e-22 107.8 91 64.8
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 9.7e-22 107.8 174 37.4
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 9.7e-22 107.8 174 37.4
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 6.3e-21 105.1 105 52.4
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 1.2e-19 100.9 217 35.0
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.6e-19 100.5 128 50.8
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 3.5e-19 99.4 95 55.8
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 5.0e-18 95.5 214 34.1
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.7e-16 89.7 105 48.6
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.7e-16 89.7 105 48.6
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-13 79.3 99 40.4
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 3.1e-12 76.3 69 58.0
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 5.3e-12 75.5 57 66.7
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.0e-07 61.2 47 63.8
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 5.2e-07 58.9 64 50.0


User provided reference genes

Program Settings