Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.0e-124 449.1 224 100.0
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 3.4e-36 156.0 201 46.8
HPP92_014333 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.0e-28 130.2 100 72.0
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.7e-17 93.2 190 34.7
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.8e-16 90.5 187 36.9
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 5.1e-16 89.0 171 36.3
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 7.4e-15 85.1 171 35.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 9.7e-15 84.7 186 35.5
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 4.8e-14 82.4 185 33.5
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 8.2e-14 81.6 181 34.3
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.1e-13 81.3 188 33.5
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.4e-13 80.9 177 36.2
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.8e-13 80.5 174 36.2
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 2.4e-13 80.1 183 35.0
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 2.4e-13 80.1 191 31.9
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 3.1e-13 79.7 174 36.8
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 4.1e-13 79.3 177 36.2
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 4.1e-13 79.3 175 36.0
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 4.1e-13 79.3 192 32.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 5.3e-13 79.0 178 34.8
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.5e-12 77.4 190 34.2
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 2.0e-12 77.0 190 35.8
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 2.0e-12 77.0 186 34.4
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 4.5e-12 75.9 205 30.7
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 5.9e-12 75.5 186 34.4
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 7.7e-12 75.1 171 32.2
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.7e-11 73.9 190 33.2
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 1.7e-11 73.9 190 30.5
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-11 73.6 162 32.1
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 2.9e-11 73.2 179 33.0
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 2.9e-11 73.2 174 34.5
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 5.0e-11 72.4 186 31.7
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 6.5e-11 72.0 177 33.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 8.5e-11 71.6 170 34.1
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.1e-10 71.2 194 32.0
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.1e-10 71.2 179 32.4
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.4e-10 70.9 92 46.7
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.5e-10 70.1 184 32.6
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.2e-09 67.8 129 39.5
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 1.6e-09 67.4 196 31.6
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.1e-09 67.0 170 32.4
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-09 66.6 115 38.3
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-09 66.6 115 37.4
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 2.7e-09 66.6 183 30.6
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 2.7e-09 66.6 187 31.6
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 7.9e-09 65.1 206 28.2
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 1.4e-08 64.3 165 31.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 1.4e-08 64.3 94 42.6
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 1.8e-08 63.9 183 30.6
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 2.3e-08 63.5 89 44.9
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 3.0e-08 63.2 202 32.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 3.9e-08 62.8 170 30.6
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 5.1e-08 62.4 113 37.2
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 6.7e-08 62.0 209 32.1
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.1e-07 61.2 209 28.7
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 1.1e-07 61.2 67 47.8
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.0e-07 60.5 192 29.7
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.6e-07 60.1 115 35.7
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.6e-07 60.1 204 30.4
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 3.3e-07 59.7 143 35.0
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.3e-07 59.7 163 30.7
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 7.4e-07 58.5 162 34.0
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.2e-06 57.0 101 38.6
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 2.2e-06 57.0 170 32.4
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 3.7e-06 56.2 172 30.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 4.8e-06 55.8 117 38.5


User provided reference genes

Program Settings