Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 1.3e-235 819.3 414 100.0
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 6.5e-57 225.7 435 35.4
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 6.5e-57 225.7 293 43.7
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 3.6e-55 219.9 282 44.3
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 2.0e-53 214.2 298 41.3
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 2.6e-50 203.8 393 35.4
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 7.7e-50 202.2 436 33.7
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 7.7e-50 202.2 393 35.4
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 2.9e-49 200.3 315 39.4
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 5.5e-48 196.1 287 39.4
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 5.2e-46 189.5 322 38.8
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 1.3e-44 184.9 193 47.2
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 1.6e-42 177.9 440 30.2
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 1.7e-41 174.5 419 31.0
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 1.7e-41 174.5 358 34.1
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 5.0e-41 172.9 352 34.4
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 1.9e-40 171.0 188 43.6
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 1.9e-40 171.0 427 31.9
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 7.2e-40 169.1 294 35.0
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 6.1e-39 166.0 318 35.8
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 8.0e-39 165.6 424 32.1
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 1.5e-37 161.4 285 37.2
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 4.4e-37 159.8 302 36.4
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 3.7e-36 156.8 356 30.9
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 4.8e-36 156.4 187 41.7
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 8.2e-36 155.6 187 41.2
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 1.4e-35 154.8 187 41.2
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 1.8e-35 154.5 234 38.0
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 1.8e-35 154.5 287 33.8
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 2.4e-35 154.1 298 34.2
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 3.1e-35 153.7 298 34.9
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 5.3e-35 152.9 298 33.9
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 5.3e-35 152.9 310 32.9
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 1.7e-33 147.9 281 33.1
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 1.7e-33 147.9 268 33.2
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 3.8e-33 146.7 307 30.6
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.9e-32 144.4 418 28.2
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 1.2e-31 141.7 184 40.2
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 3.0e-30 137.1 437 29.5
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 2.2e-28 131.0 252 34.5
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 9.8e-21 105.5 426 28.2
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 2.8e-20 104.0 170 32.9
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 4.5e-18 96.7 259 32.8
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 1.6e-15 88.2 91 45.1
Os09g0346900 Oryza sativa ssp. japonica HOM05D001613 ORTHO05D001556 3.9e-09 67.0 131 34.4
Nn8g39093 Nelumbo nucifera HOM05D001613 ORTHO05D001556 2.8e-07 60.8 116 32.8
FvH4_2g35340 Fragaria vesca HOM05D001613 ORTHO05D001556 6.2e-07 59.7 116 31.9
FAN15G0337 Fragaria x ananassa HOM05D001613 ORTHO05D001556 6.2e-07 59.7 116 31.9
FAN20G0144 Fragaria x ananassa HOM05D001613 ORTHO05D001556 6.2e-07 59.7 116 31.9
FAN27G0387 Fragaria x ananassa HOM05D001613 ORTHO05D001556 6.2e-07 59.7 116 31.9
RcHm_v2.0_Chr6g0306581 Rosa chinensis HOM05D001613 ORTHO05D001556 6.2e-07 59.7 116 31.9
unitig_0.g2570 Utricularia gibba HOM05D001613 ORTHO05D001556 1.4e-06 58.5 116 33.6
MD09G1204600 Malus domestica HOM05D001613 ORTHO05D001556 5.2e-06 56.6 122 30.3


User provided reference genes

Program Settings