Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014222 Vanilla planifolia HOM05D005484 ORTHO05D006761 7.2e-72 273.9 144 100.0
HPP92_014217 Vanilla planifolia HOM05D005484 ORTHO05D006761 2.7e-10 69.3 88 50.0
HPP92_026475 Vanilla planifolia HOM05D005484 ORTHO05D006761 2.7e-10 69.3 88 50.0
Zm00001eb053210 Zea mays HOM05D005484 ORTHO05D006761 1.0e-09 67.4 107 42.1
Potri.009G151400 Populus trichocarpa HOM05D005484 ORTHO05D006761 3.9e-09 65.5 85 47.1
Sabra09G0119900 Salix brachista HOM05D005484 ORTHO05D006761 3.9e-09 65.5 85 47.1
SalBow3G0456 Salvia bowleyana HOM05D005484 ORTHO05D006761 3.9e-09 65.5 85 48.2
GSVIVG01031426001 Vitis vinifera HOM05D005484 ORTHO05D006761 3.9e-09 65.5 85 48.2
AT5G22830 Arabidopsis thaliana HOM05D005484 ORTHO05D006761 5.1e-09 65.1 82 48.8
Carub.0006s2055 Capsella rubella HOM05D005484 ORTHO05D006761 5.1e-09 65.1 82 48.8
MBI01_g19330_MAGBIO Magnolia biondii HOM05D005484 ORTHO05D006761 5.1e-09 65.1 88 45.5
Manes.04G011000 Manihot esculenta HOM05D005484 ORTHO05D006761 6.7e-09 64.7 85 45.9
Prupe.6G116100 Prunus persica HOM05D005484 ORTHO05D006761 6.7e-09 64.7 85 45.9
Nn2g13932 Nelumbo nucifera HOM05D005484 ORTHO05D006761 8.7e-09 64.3 85 44.7
Aa31LG1G12880 Aethionema arabicum HOM05D005484 ORTHO05D006761 1.5e-08 63.5 82 47.6
AL6G33940 Arabidopsis lyrata HOM05D005484 ORTHO05D006761 1.5e-08 63.5 82 47.6
Sp6g22590 Schrenkiella parvula HOM05D005484 ORTHO05D006761 1.5e-08 63.5 82 47.6
THA.LOC104799526 Tarenaya hassleriana HOM05D005484 ORTHO05D006761 1.5e-08 63.5 85 47.1
TAR623G0584 Trochodendron aralioides HOM05D005484 ORTHO05D006761 1.5e-08 63.5 85 44.7
BcaC04g19603 Brassica carinata HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 47.6
A10p18190 Brassica napus HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 47.6
C09p53800 Brassica napus HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 47.6
BolC9t58255H Brassica oleracea HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 47.6
BraA10t43894Z Brassica rapa HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 47.6
Thhalv10013483m.g Eutrema salsugineum HOM05D005484 ORTHO05D006761 1.9e-08 63.2 82 46.3
PSO063G3820 Papaver somniferum HOM05D005484 ORTHO05D006761 1.9e-08 63.2 86 45.3
PSO339G5122 Papaver somniferum HOM05D005484 ORTHO05D006761 1.9e-08 63.2 86 45.3
CDE06G0450 Ceratophyllum demersum HOM05D005484 ORTHO05D006761 2.5e-08 62.8 85 47.1
MD11G1153500 Malus domestica HOM05D005484 ORTHO05D006761 2.5e-08 62.8 85 44.7
vmacro03234 Vaccinium macrocarpon HOM05D005484 ORTHO05D006761 2.5e-08 62.8 85 45.9
BcaB08g36405 Brassica carinata HOM05D005484 ORTHO05D006761 3.3e-08 62.4 82 46.3
Glyma.12G180000 Glycine max HOM05D005484 ORTHO05D006761 3.3e-08 62.4 85 45.9
Hma1.2p1_0864F.1_g230060 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 3.3e-08 62.4 85 45.9
Hma1.2p1_1447F.1_g284000 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 3.3e-08 62.4 85 45.9
TWI31G0675 Tripterygium wilfordii HOM05D005484 ORTHO05D006761 3.3e-08 62.4 85 44.7
Aqoxy1G01005 Aquilegia oxysepala HOM05D005484 ORTHO05D006761 5.6e-08 61.6 69 50.7
CARHR190740 Cardamine hirsuta HOM05D005484 ORTHO05D006761 5.6e-08 61.6 82 46.3
Oeu026994.1 Olea europaea HOM05D005484 ORTHO05D006761 5.6e-08 61.6 85 47.1
Rhsim13G0103500 Rhododendron simsii HOM05D005484 ORTHO05D006761 5.6e-08 61.6 95 44.2
Hund07725 Selenicereus undatus HOM05D005484 ORTHO05D006761 5.6e-08 61.6 105 41.0
Actinidia24166 Actinidia chinensis HOM05D005484 ORTHO05D006761 7.4e-08 61.2 95 44.2
arahy.Tifrunner.gnm1.ann1.9XN6EE Arachis hypogaea HOM05D005484 ORTHO05D006761 7.4e-08 61.2 105 40.0
arahy.Tifrunner.gnm1.ann1.TP1LAH Arachis hypogaea HOM05D005484 ORTHO05D006761 7.4e-08 61.2 105 40.0
Glyma.13G320800 Glycine max HOM05D005484 ORTHO05D006761 7.4e-08 61.2 105 40.0
MD03G1131000 Malus domestica HOM05D005484 ORTHO05D006761 7.4e-08 61.2 85 43.5
Peaxi162Scf00150g00079 Petunia axillaris HOM05D005484 ORTHO05D006761 7.4e-08 61.2 85 45.9
SGA_v2.0_scaffold466G52019 Striga asiatica HOM05D005484 ORTHO05D006761 7.4e-08 61.2 85 45.9
CAN.G644.47 Capsicum annuum HOM05D005484 ORTHO05D006761 9.6e-08 60.8 105 41.0
ClCG01G013990 Citrullus lanatus HOM05D005484 ORTHO05D006761 9.6e-08 60.8 107 38.3
MELO3C004840.2 Cucumis melo HOM05D005484 ORTHO05D006761 9.6e-08 60.8 107 38.3
Nitab4.5_0000442g0140 Nicotiana tabacum HOM05D005484 ORTHO05D006761 9.6e-08 60.8 85 45.9
Solyc11g066660.3 Solanum lycopersicum HOM05D005484 ORTHO05D006761 9.6e-08 60.8 85 45.9
Sopen11g026390 Solanum pennellii HOM05D005484 ORTHO05D006761 9.6e-08 60.8 85 45.9
PGSC0003DMG401000463 Solanum tuberosum HOM05D005484 ORTHO05D006761 9.6e-08 60.8 85 45.9
Ciclev10028468m.g Citrus clementina HOM05D005484 ORTHO05D006761 1.3e-07 60.5 95 44.2
COL.COLO4_19256 Corchorus olitorius HOM05D005484 ORTHO05D006761 1.3e-07 60.5 85 44.7
Manes.11G155200 Manihot esculenta HOM05D005484 ORTHO05D006761 1.3e-07 60.5 85 44.7
Phvul.005G128800 Phaseolus vulgaris HOM05D005484 ORTHO05D006761 1.3e-07 60.5 105 39.0
PGR119G0112 Punica granatum HOM05D005484 ORTHO05D006761 1.3e-07 60.5 69 52.2
VMungo1080G0291 Vigna mungo HOM05D005484 ORTHO05D006761 1.3e-07 60.5 85 44.7
ATR0665G031 Amborella trichopoda HOM05D005484 ORTHO05D006761 1.6e-07 60.1 105 40.0
Cfa010112 Carpinus fangiana HOM05D005484 ORTHO05D006761 1.6e-07 60.1 85 45.9
CiPaw.14G105100 Carya illinoinensis HOM05D005484 ORTHO05D006761 1.6e-07 60.1 69 47.8
Haze_23498 Corylus avellana HOM05D005484 ORTHO05D006761 1.6e-07 60.1 85 45.9
CsaV3_1G014320 Cucumis sativus L. HOM05D005484 ORTHO05D006761 2.1e-07 59.7 107 38.3
Lj2A998T22 Lonicera japonica HOM05D005484 ORTHO05D006761 2.1e-07 59.7 69 50.7
Os03g0684400 Oryza sativa ssp. japonica HOM05D005484 ORTHO05D006761 2.1e-07 59.7 108 39.8
Atru.chr3.3424 Acer truncatum HOM05D005484 ORTHO05D006761 2.8e-07 59.3 85 43.5
Cpa.g.sc47.33 Carica papaya HOM05D005484 ORTHO05D006761 2.8e-07 59.3 85 44.7
Duzib150G1233 Durio zibethinus HOM05D005484 ORTHO05D006761 2.8e-07 59.3 69 49.3
ECA238G0643 Erigeron canadensis HOM05D005484 ORTHO05D006761 2.8e-07 59.3 85 44.7
Migut.N02528 Erythranthe guttata HOM05D005484 ORTHO05D006761 2.8e-07 59.3 85 45.9
unitig_22.g6648 Utricularia gibba HOM05D005484 ORTHO05D006761 2.8e-07 59.3 85 44.7
Sed0014392 Sechium edule HOM05D005484 ORTHO05D006761 3.7e-07 58.9 107 37.4
CSS0041747 Camellia sinensis var. sinensis HOM05D005484 ORTHO05D006761 4.8e-07 58.5 99 39.4
CANSAT64G0117 Cannabis sativa HOM05D005484 ORTHO05D006761 4.8e-07 58.5 85 43.5
CANSAT64G0716 Cannabis sativa HOM05D005484 ORTHO05D006761 4.8e-07 58.5 85 43.5
Gohir.A13G223600 Gossypium hirsutum HOM05D005484 ORTHO05D006761 4.8e-07 58.5 85 43.5
Gohir.D13G228400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 4.8e-07 58.5 85 43.5
Gorai.013G259100 Gossypium raimondii HOM05D005484 ORTHO05D006761 4.8e-07 58.5 85 43.5
Thecc.09G294600 Theobroma cacao HOM05D005484 ORTHO05D006761 8.1e-07 57.8 69 47.8
DCAR_015491 Daucus carota HOM05D005484 ORTHO05D006761 1.1e-06 57.4 83 47.0
HanXRQChr14g0451871 Helianthus annuus HOM05D005484 ORTHO05D006761 1.1e-06 57.4 85 43.5
TPR.G32384 Trifolium pratense HOM05D005484 ORTHO05D006761 1.1e-06 57.4 105 37.1
Ca_01692_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 1.4e-06 57.0 105 38.1
Ca_30938_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 1.4e-06 57.0 105 38.1
Lsat_1_v5_gn_2_96860 Lactuca sativa HOM05D005484 ORTHO05D006761 1.4e-06 57.0 85 42.4
Psat5g253880 Pisum sativum HOM05D005484 ORTHO05D006761 1.4e-06 57.0 85 41.2
Cc01_g10030 Coffea canephora HOM05D005484 ORTHO05D006761 1.8e-06 56.6 85 43.5
ECA233G3593 Erigeron canadensis HOM05D005484 ORTHO05D006761 1.8e-06 56.6 69 49.3
Lj3g0024733 Lotus japonicus HOM05D005484 ORTHO05D006761 1.8e-06 56.6 105 38.1
RcHm_v2.0_Chr5g0055951 Rosa chinensis HOM05D005484 ORTHO05D006761 1.8e-06 56.6 85 42.4
Duzib170G0418 Durio zibethinus HOM05D005484 ORTHO05D006761 2.4e-06 56.2 69 47.8
Medtr2g084565 Medicago truncatula HOM05D005484 ORTHO05D006761 2.4e-06 56.2 105 37.1
QL01p014158 Quercus lobata HOM05D005484 ORTHO05D006761 2.4e-06 56.2 105 39.0
FvH4_3g30160 Fragaria vesca HOM05D005484 ORTHO05D006761 4.0e-06 55.5 85 41.2
FAN11G2949 Fragaria x ananassa HOM05D005484 ORTHO05D006761 4.0e-06 55.5 85 41.2
FAN16G1757 Fragaria x ananassa HOM05D005484 ORTHO05D006761 4.0e-06 55.5 85 41.2
FAN25G3300 Fragaria x ananassa HOM05D005484 ORTHO05D006761 6.9e-06 54.7 85 41.2
Gohir.A09G086400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 9.0e-06 54.3 69 43.5
Gohir.D09G086420 Gossypium hirsutum HOM05D005484 ORTHO05D006761 9.0e-06 54.3 69 43.5
Gorai.006G102800 Gossypium raimondii HOM05D005484 ORTHO05D006761 9.0e-06 54.3 69 43.5
Lalb_Chr22g0350511 Lupinus albus HOM05D005484 ORTHO05D006761 9.0e-06 54.3 105 37.1


User provided reference genes

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