Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014216 Vanilla planifolia HOM05D005484 ORTHO05D006761 1.0e-64 250.0 132 100.0
HPP92_026475 Vanilla planifolia HOM05D005484 ORTHO05D006761 1.5e-55 219.5 115 100.0
arahy.Tifrunner.gnm1.ann1.9XN6EE Arachis hypogaea HOM05D005484 ORTHO05D006761 5.3e-13 78.2 80 53.8
Actinidia07200 Actinidia chinensis HOM05D005484 ORTHO05D006761 1.2e-12 77.0 75 53.3
TAR623G0584 Trochodendron aralioides HOM05D005484 ORTHO05D006761 1.2e-12 77.0 72 52.8
Sed0014392 Sechium edule HOM05D005484 ORTHO05D006761 1.6e-12 76.6 74 56.8
ClCG01G013990 Citrullus lanatus HOM05D005484 ORTHO05D006761 2.0e-12 76.3 73 52.1
arahy.Tifrunner.gnm1.ann1.TP1LAH Arachis hypogaea HOM05D005484 ORTHO05D006761 2.6e-12 75.9 62 62.9
SEGI_15590 Sequoiadendron giganteum HOM05D005484 ORTHO05D006761 3.5e-12 75.5 68 55.9
CsaV3_1G014320 Cucumis sativus L. HOM05D005484 ORTHO05D006761 7.7e-12 74.3 78 51.3
MBI01_g19332_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 7.7e-12 74.3 114 42.1
TPR.G32384 Trifolium pratense HOM05D005484 ORTHO05D006761 7.7e-12 74.3 72 55.6
Potri.009G151400 Populus trichocarpa HOM05D005484 ORTHO05D006761 1.0e-11 73.9 58 62.1
PGR119G0112 Punica granatum HOM05D005484 ORTHO05D006761 1.0e-11 73.9 73 52.1
Actinidia24166 Actinidia chinensis HOM05D005484 ORTHO05D006761 1.3e-11 73.6 75 50.7
CANSAT64G0716 Cannabis sativa HOM05D005484 ORTHO05D006761 1.3e-11 73.6 79 53.2
CsaV3_4G022020 Cucumis sativus L. HOM05D005484 ORTHO05D006761 1.3e-11 73.6 78 51.3
Medtr2g084565 Medicago truncatula HOM05D005484 ORTHO05D006761 1.3e-11 73.6 72 55.6
Ciclev10028468m.g Citrus clementina HOM05D005484 ORTHO05D006761 1.7e-11 73.2 58 60.3
Lj3g0024733 Lotus japonicus HOM05D005484 ORTHO05D006761 1.7e-11 73.2 75 49.3
Sabra09G0119900 Salix brachista HOM05D005484 ORTHO05D006761 1.7e-11 73.2 61 59.0
CANSAT64G0117 Cannabis sativa HOM05D005484 ORTHO05D006761 2.2e-11 72.8 68 57.4
MELO3C004840.2 Cucumis melo HOM05D005484 ORTHO05D006761 2.2e-11 72.8 65 56.9
Gohir.D13G228400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 2.2e-11 72.8 82 51.2
CARHR190740 Cardamine hirsuta HOM05D005484 ORTHO05D006761 2.9e-11 72.4 65 56.9
Ca_01692_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 2.9e-11 72.4 72 52.8
Ca_30938_v3 Cicer arietinum L. HOM05D005484 ORTHO05D006761 2.9e-11 72.4 72 52.8
Lalb_Chr22g0350511 Lupinus albus HOM05D005484 ORTHO05D006761 2.9e-11 72.4 81 49.4
Psat5g253880 Pisum sativum HOM05D005484 ORTHO05D006761 2.9e-11 72.4 59 62.7
Thhalv10013483m.g Eutrema salsugineum HOM05D005484 ORTHO05D006761 3.8e-11 72.0 55 65.5
Gohir.A13G223600 Gossypium hirsutum HOM05D005484 ORTHO05D006761 3.8e-11 72.0 82 50.0
Sc06g0008870 Simmondsia chinensis HOM05D005484 ORTHO05D006761 3.8e-11 72.0 56 64.3
PSO063G3820 Papaver somniferum HOM05D005484 ORTHO05D006761 5.0e-11 71.6 77 48.1
RcHm_v2.0_Chr5g0055951 Rosa chinensis HOM05D005484 ORTHO05D006761 5.0e-11 71.6 61 59.0
FvH4_3g30160 Fragaria vesca HOM05D005484 ORTHO05D006761 6.5e-11 71.2 59 61.0
FAN11G2949 Fragaria x ananassa HOM05D005484 ORTHO05D006761 6.5e-11 71.2 59 61.0
FAN16G1757 Fragaria x ananassa HOM05D005484 ORTHO05D006761 6.5e-11 71.2 61 60.7
FAN25G3300 Fragaria x ananassa HOM05D005484 ORTHO05D006761 6.5e-11 71.2 59 61.0
Glyma.12G180000 Glycine max HOM05D005484 ORTHO05D006761 6.5e-11 71.2 100 43.0
TWI31G0675 Tripterygium wilfordii HOM05D005484 ORTHO05D006761 6.5e-11 71.2 55 61.8
Gorai.013G259100 Gossypium raimondii HOM05D005484 ORTHO05D006761 8.5e-11 70.9 82 50.0
GSVIVG01031426001 Vitis vinifera HOM05D005484 ORTHO05D006761 8.5e-11 70.9 54 63.0
CiPaw.14G105100 Carya illinoinensis HOM05D005484 ORTHO05D006761 1.1e-10 70.5 77 53.2
CDE06G0450 Ceratophyllum demersum HOM05D005484 ORTHO05D006761 1.1e-10 70.5 70 51.4
Glyma.13G320800 Glycine max HOM05D005484 ORTHO05D006761 1.1e-10 70.5 100 44.0
Manes.11G155200 Manihot esculenta HOM05D005484 ORTHO05D006761 1.1e-10 70.5 50 66.0
Oeu026994.1 Olea europaea HOM05D005484 ORTHO05D006761 1.1e-10 70.5 56 62.5
QL01p014158 Quercus lobata HOM05D005484 ORTHO05D006761 1.1e-10 70.5 50 66.0
AL6G33940 Arabidopsis lyrata HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
AT5G22830 Arabidopsis thaliana HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
BcaB08g36405 Brassica carinata HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
BcaC04g19603 Brassica carinata HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
A10p18190 Brassica napus HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
BraA10t43894Z Brassica rapa HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
Carub.0006s2055 Capsella rubella HOM05D005484 ORTHO05D006761 1.5e-10 70.1 55 63.6
Os03g0684400 Oryza sativa ssp. japonica HOM05D005484 ORTHO05D006761 1.5e-10 70.1 54 64.8
Sopen11g026390 Solanum pennellii HOM05D005484 ORTHO05D006761 1.5e-10 70.1 77 49.4
Thecc.09G294600 Theobroma cacao HOM05D005484 ORTHO05D006761 1.5e-10 70.1 62 58.1
Atru.chr3.3424 Acer truncatum HOM05D005484 ORTHO05D006761 1.9e-10 69.7 60 56.7
Cfa010112 Carpinus fangiana HOM05D005484 ORTHO05D006761 1.9e-10 69.7 56 62.5
Nn2g13932 Nelumbo nucifera HOM05D005484 ORTHO05D006761 1.9e-10 69.7 60 58.3
PSO339G5122 Papaver somniferum HOM05D005484 ORTHO05D006761 1.9e-10 69.7 67 52.2
Prupe.6G116100 Prunus persica HOM05D005484 ORTHO05D006761 1.9e-10 69.7 56 60.7
Aa31LG1G12880 Aethionema arabicum HOM05D005484 ORTHO05D006761 2.5e-10 69.3 55 61.8
COL.COLO4_19256 Corchorus olitorius HOM05D005484 ORTHO05D006761 2.5e-10 69.3 64 54.7
Phvul.005G128800 Phaseolus vulgaris HOM05D005484 ORTHO05D006761 2.5e-10 69.3 60 58.3
VMungo1080G0291 Vigna mungo HOM05D005484 ORTHO05D006761 2.5e-10 69.3 60 58.3
Zm00001eb053210 Zea mays HOM05D005484 ORTHO05D006761 2.5e-10 69.3 50 68.0
Aqoxy1G01005 Aquilegia oxysepala HOM05D005484 ORTHO05D006761 3.2e-10 68.9 69 50.7
Duzib170G0418 Durio zibethinus HOM05D005484 ORTHO05D006761 3.2e-10 68.9 62 54.8
Manes.04G011000 Manihot esculenta HOM05D005484 ORTHO05D006761 3.2e-10 68.9 50 64.0
THA.LOC104799526 Tarenaya hassleriana HOM05D005484 ORTHO05D006761 3.2e-10 68.9 56 60.7
C09p53800 Brassica napus HOM05D005484 ORTHO05D006761 4.2e-10 68.6 55 61.8
BolC9t58255H Brassica oleracea HOM05D005484 ORTHO05D006761 4.2e-10 68.6 55 61.8
CSS0041747 Camellia sinensis var. sinensis HOM05D005484 ORTHO05D006761 4.2e-10 68.6 80 46.2
Lj2A998T22 Lonicera japonica HOM05D005484 ORTHO05D006761 4.2e-10 68.6 50 64.0
Ah.01g016150 Amaranthus hybridus HOM05D005484 ORTHO05D006761 5.5e-10 68.2 62 56.5
ATR0665G031 Amborella trichopoda HOM05D005484 ORTHO05D006761 5.5e-10 68.2 50 62.0
EL10Ac9g21044 Beta vulgaris HOM05D005484 ORTHO05D006761 5.5e-10 68.2 64 54.7
AUR62023974 Chenopodium quinoa HOM05D005484 ORTHO05D006761 5.5e-10 68.2 61 55.7
SGA_v2.0_scaffold466G52019 Striga asiatica HOM05D005484 ORTHO05D006761 5.5e-10 68.2 54 61.1
Rhsim13G0103500 Rhododendron simsii HOM05D005484 ORTHO05D006761 7.2e-10 67.8 54 59.3
Solyc11g066660.3 Solanum lycopersicum HOM05D005484 ORTHO05D006761 7.2e-10 67.8 66 54.5
Sp6g22590 Schrenkiella parvula HOM05D005484 ORTHO05D006761 9.4e-10 67.4 55 60.0
vmacro03234 Vaccinium macrocarpon HOM05D005484 ORTHO05D006761 9.4e-10 67.4 54 59.3
AUR62031772 Chenopodium quinoa HOM05D005484 ORTHO05D006761 1.2e-09 67.0 62 54.8
Duzib150G1233 Durio zibethinus HOM05D005484 ORTHO05D006761 1.2e-09 67.0 62 54.8
Gohir.D09G086420 Gossypium hirsutum HOM05D005484 ORTHO05D006761 1.2e-09 67.0 54 59.3
Gorai.006G102800 Gossypium raimondii HOM05D005484 ORTHO05D006761 1.2e-09 67.0 54 59.3
MD03G1131000 Malus domestica HOM05D005484 ORTHO05D006761 1.2e-09 67.0 54 61.1
unitig_22.g6648 Utricularia gibba HOM05D005484 ORTHO05D006761 1.2e-09 67.0 54 59.3
Peaxi162Scf00150g00079 Petunia axillaris HOM05D005484 ORTHO05D006761 1.6e-09 66.6 62 54.8
Eucgr.J00410 Eucalyptus grandis HOM05D005484 ORTHO05D006761 2.1e-09 66.2 49 61.2
MD11G1153500 Malus domestica HOM05D005484 ORTHO05D006761 2.1e-09 66.2 54 61.1
Nitab4.5_0000442g0140 Nicotiana tabacum HOM05D005484 ORTHO05D006761 2.1e-09 66.2 64 50.0
DCAR_015491 Daucus carota HOM05D005484 ORTHO05D006761 2.7e-09 65.9 69 49.3
Migut.N02528 Erythranthe guttata HOM05D005484 ORTHO05D006761 2.7e-09 65.9 54 59.3
SalBow3G0456 Salvia bowleyana HOM05D005484 ORTHO05D006761 2.7e-09 65.9 50 60.0
CAN.G644.47 Capsicum annuum HOM05D005484 ORTHO05D006761 3.6e-09 65.5 70 51.4
Cc01_g10030 Coffea canephora HOM05D005484 ORTHO05D006761 3.6e-09 65.5 50 62.0
Lsat_1_v5_gn_2_96860 Lactuca sativa HOM05D005484 ORTHO05D006761 3.6e-09 65.5 74 48.6
Gohir.A09G086400 Gossypium hirsutum HOM05D005484 ORTHO05D006761 4.7e-09 65.1 54 57.4
ECA238G0643 Erigeron canadensis HOM05D005484 ORTHO05D006761 6.1e-09 64.7 56 57.1
HanXRQChr14g0451871 Helianthus annuus HOM05D005484 ORTHO05D006761 8.0e-09 64.3 50 60.0
Lsat_1_v5_gn_6_42460 Lactuca sativa HOM05D005484 ORTHO05D006761 1.8e-08 63.2 75 48.0
ECA233G3593 Erigeron canadensis HOM05D005484 ORTHO05D006761 1.2e-07 60.5 50 56.0
Pp3c5_14300 Physcomitrium patens HOM05D005484 ORTHO05D006761 2.6e-07 59.3 74 43.2
Hma1.2p1_1447F.1_g284000 Hydrangea macrophylla HOM05D005484 ORTHO05D006761 4.4e-07 58.5 72 48.6
HanXRQChr02g0055131 Helianthus annuus HOM05D005484 ORTHO05D006761 5.7e-07 58.2 50 54.0
Pp3c25_90 Physcomitrium patens HOM05D005484 ORTHO05D006761 5.7e-07 58.2 61 50.8
AagrBONN_evm.TU.Sc2ySwM_228.452 Anthoceros agrestis HOM05D005484 ORTHO05D006761 3.7e-06 55.5 65 41.5
Mapoly0034s0035 Marchantia polymorpha HOM05D005484 ORTHO05D006761 3.7e-06 55.5 66 50.0


User provided reference genes

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