Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 0.0e+00 1109.0 559 100.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 0.0e+00 1101.3 559 98.9
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 9.6e-96 355.1 527 41.4
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 8.1e-95 352.1 550 41.6
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 8.4e-92 342.0 529 40.8
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.0e-89 335.1 491 42.0
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.0e-89 333.6 516 40.3
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 6.6e-89 332.4 507 40.6
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.1e-88 331.6 523 40.2
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.1e-88 331.6 530 39.1
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.9e-88 330.9 515 40.0
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.9e-88 330.9 520 39.6
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.3e-88 330.1 516 40.3
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 9.6e-88 328.6 516 39.7
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.6e-87 327.8 451 43.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.6e-87 327.8 521 39.9
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 4.8e-87 326.2 500 40.0
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.8e-87 326.2 551 38.3
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 8.1e-87 325.5 485 41.6
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.4e-86 324.7 522 37.0
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 2.4e-86 323.9 547 38.8
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.1e-86 323.6 569 38.3
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 5.3e-86 322.8 510 36.7
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 9.0e-86 322.0 525 38.9
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 9.0e-86 322.0 486 42.0
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 1.2e-85 321.6 491 41.1
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 4.5e-85 319.7 566 37.8
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 5.8e-85 319.3 457 41.8
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 7.6e-85 318.9 451 43.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 7.6e-85 318.9 530 39.2
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 9.9e-85 318.5 552 37.1
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 9.9e-85 318.5 531 37.9
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.8e-84 316.6 467 40.9
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.8e-84 316.6 518 38.6
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.8e-84 316.6 483 41.6
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 8.4e-84 315.5 527 38.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.1e-83 315.1 522 38.7
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 1.1e-83 315.1 519 38.2
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.1e-83 315.1 467 40.9
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.4e-83 314.7 534 38.4
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 3.2e-83 313.5 486 38.7
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 5.4e-83 312.8 496 38.9
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 7.1e-83 312.4 528 37.9
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 7.1e-83 312.4 520 38.5
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 7.1e-83 312.4 514 38.7
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 2.1e-82 310.8 517 37.7
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 2.1e-82 310.8 548 37.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.8e-81 307.8 453 40.2
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 2.3e-81 307.4 521 39.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 3.9e-81 306.6 519 39.3
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 6.7e-81 305.8 544 36.8
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 4.3e-80 303.1 487 39.6
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 5.6e-80 302.8 455 40.4
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 5.6e-80 302.8 521 35.5
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 7.4e-80 302.4 500 38.6
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.3e-79 301.6 509 36.5
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.3e-79 301.6 548 35.9
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.6e-79 301.2 533 37.5
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 2.8e-79 300.4 519 38.9
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 3.1e-78 297.0 563 35.0
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 5.3e-78 296.2 508 36.2
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.5e-77 294.7 513 36.1
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.0e-77 294.3 482 39.4
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.0e-77 294.3 579 35.9
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.6e-77 293.9 507 37.5
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 3.4e-77 293.5 546 36.1
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.0e-76 292.0 541 36.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.2e-76 290.8 399 41.1
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 4.9e-76 289.7 543 36.1
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 6.5e-76 289.3 506 35.2
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.4e-75 288.1 564 34.0
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.4e-75 288.1 515 35.3
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.2e-75 287.0 469 38.2
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.6e-74 284.6 508 34.6
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 6.0e-74 282.7 515 35.1
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 7.9e-74 282.3 520 37.1
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 2.3e-73 280.8 324 45.4
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 5.1e-73 279.6 358 44.1
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 5.1e-73 279.6 358 44.1
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 3.3e-72 276.9 369 40.9
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 7.4e-72 275.8 560 35.2
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 9.6e-72 275.4 581 35.1
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.3e-71 275.0 518 34.9
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.1e-71 274.2 455 38.7
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 6.2e-71 272.7 373 45.3
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 3.1e-70 270.4 571 33.3
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 4.0e-70 270.0 590 33.7
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 6.9e-70 269.2 507 35.1
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.6e-69 267.3 453 38.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 9.3e-67 258.8 386 42.7
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.6e-66 258.1 555 32.3
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.1e-64 251.9 440 38.2
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 5.7e-64 249.6 525 36.0
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.3e-63 248.4 562 32.7
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-63 246.5 407 36.6
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 8.2e-63 245.7 528 33.1
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 7.7e-61 239.2 484 34.3
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.1e-58 231.1 399 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.1e-57 226.5 485 32.4
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 4.3e-56 223.4 376 35.6
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 3.1e-54 217.2 329 38.9
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 1.5e-45 188.3 322 37.6
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 2.6e-45 187.6 419 33.4
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 4.7e-42 176.8 213 45.1
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 1.8e-30 138.3 232 38.4
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 7.0e-30 136.3 175 42.3
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.2e-27 127.1 257 36.2
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.0e-26 122.9 165 40.6
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.0e-25 122.5 286 33.9
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 8.3e-23 112.8 191 34.0
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.7e-20 105.1 145 38.6
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.3e-11 73.9 70 52.9
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.2e-10 72.4 156 30.8
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 5.2e-09 67.0 208 29.3
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.8e-08 63.5 63 50.8
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 9.8e-08 62.8 52 59.6
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 9.8e-08 62.8 94 36.2


User provided reference genes

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