Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 9.5e-104 380.2 192 100.0
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 1.1e-30 137.5 214 43.0
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.1e-30 137.5 214 42.5
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.8e-30 136.7 209 44.5
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 4.1e-30 135.6 200 43.5
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 1.6e-29 133.7 218 41.7
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.7e-29 132.9 203 45.3
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 2.2e-28 129.8 211 43.1
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 2.9e-28 129.4 219 41.6
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 1.1e-27 127.5 206 42.2
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 3.2e-27 125.9 198 43.9
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 4.2e-27 125.6 210 41.0
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.2e-27 125.6 212 40.6
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 5.5e-27 125.2 210 42.9
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 9.4e-27 124.4 206 40.3
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 1.2e-26 124.0 205 41.5
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 1.6e-26 123.6 221 40.3
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 1.6e-26 123.6 205 41.5
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 2.7e-26 122.9 209 41.1
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 2.7e-26 122.9 197 41.1
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.7e-26 122.9 208 40.9
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.7e-26 122.9 203 42.4
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.6e-26 122.5 209 41.6
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.7e-26 122.1 208 40.9
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 4.7e-26 122.1 198 43.4
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.0e-25 120.9 197 43.1
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.0e-25 120.9 224 38.8
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 1.4e-25 120.6 208 42.8
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 1.4e-25 120.6 213 39.4
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 1.4e-25 120.6 197 43.1
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 1.8e-25 120.2 205 42.9
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.8e-25 120.2 219 42.9
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 1.8e-25 120.2 209 44.5
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 2.3e-25 119.8 209 42.6
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 2.3e-25 119.8 212 39.6
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 2.3e-25 119.8 202 42.1
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 3.0e-25 119.4 206 40.3
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 4.0e-25 119.0 210 42.9
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 5.2e-25 118.6 214 40.2
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 8.8e-25 117.9 210 41.4
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 8.8e-25 117.9 197 43.1
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 1.5e-24 117.1 222 41.9
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 2.0e-24 116.7 208 42.3
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.6e-24 116.3 213 39.9
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.4e-24 115.5 213 39.9
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 4.4e-24 115.5 208 39.9
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 4.4e-24 115.5 222 42.3
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 5.7e-24 115.2 208 42.8
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 5.7e-24 115.2 203 42.9
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 5.7e-24 115.2 205 40.5
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 7.5e-24 114.8 204 40.2
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 7.5e-24 114.8 210 40.5
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 7.5e-24 114.8 209 40.2
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 7.5e-24 114.8 210 42.4
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 9.8e-24 114.4 192 38.0
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 9.8e-24 114.4 206 38.8
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 9.8e-24 114.4 219 40.2
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.3e-23 114.0 209 42.6
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.3e-23 114.0 220 41.8
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.3e-23 114.0 204 39.2
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 1.7e-23 113.6 218 38.5
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 1.7e-23 113.6 208 38.0
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.7e-23 113.6 210 40.5
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.7e-23 113.6 207 41.1
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 1.7e-23 113.6 213 40.4
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 1.7e-23 113.6 212 42.5
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 1.7e-23 113.6 220 38.6
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.2e-23 113.2 204 40.7
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 2.8e-23 112.8 193 41.5
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 2.8e-23 112.8 222 41.9
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 3.7e-23 112.5 212 38.2
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 3.7e-23 112.5 220 41.8
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 4.8e-23 112.1 217 38.7
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 6.3e-23 111.7 206 37.9
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 8.3e-23 111.3 204 38.7
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 8.3e-23 111.3 207 40.1
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 8.3e-23 111.3 197 38.6
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 1.1e-22 110.9 216 39.4
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.4e-22 110.5 198 42.4
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.4e-22 109.8 202 40.1
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 2.4e-22 109.8 213 39.9
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 3.1e-22 109.4 202 42.1
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.1e-22 109.4 192 40.1
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.1e-22 109.0 212 39.2
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 5.4e-22 108.6 209 38.3
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 5.4e-22 108.6 212 39.6
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.0e-22 108.2 207 38.6
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 7.0e-22 108.2 222 36.5
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 7.0e-22 108.2 211 38.9
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.6e-21 107.1 207 38.2
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.6e-21 107.1 202 39.6
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 2.0e-21 106.7 204 38.2
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 2.7e-21 106.3 207 41.1
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 3.5e-21 105.9 200 40.5
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 3.5e-21 105.9 210 36.7
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.9e-21 105.1 211 37.4
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 7.7e-21 104.8 216 36.6
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 1.0e-20 104.4 218 38.1
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.0e-20 104.4 211 37.0
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.3e-20 104.0 221 39.4
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.7e-20 103.6 213 37.6
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.0e-20 102.1 202 38.6
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.0e-20 102.1 169 42.6
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 8.6e-20 101.3 213 34.3
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 8.6e-20 101.3 206 38.3
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 1.1e-19 100.9 191 36.6
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 1.1e-19 100.9 191 36.6
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.1e-19 100.9 178 38.2
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 1.1e-19 100.9 216 38.4
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 1.1e-19 100.9 216 38.4
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-19 100.5 216 35.2
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.9e-19 100.1 195 39.5
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.9e-19 100.1 215 38.1
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.9e-19 100.1 198 37.4
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 2.5e-19 99.8 219 37.9
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 3.3e-19 99.4 215 36.7
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.2e-19 99.0 207 36.7
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 4.2e-19 99.0 231 37.2
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 5.5e-19 98.6 191 36.6
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 5.5e-19 98.6 186 40.3
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 7.2e-19 98.2 191 36.1
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 7.2e-19 98.2 191 36.1
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 7.2e-19 98.2 216 35.2
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 9.5e-19 97.8 195 38.5
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 1.6e-18 97.1 191 37.7
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.6e-18 97.1 214 38.8
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 2.1e-18 96.7 210 39.0
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 2.8e-18 96.3 184 35.9
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 8.0e-18 94.7 212 34.4
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 8.0e-18 94.7 165 42.4
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.0e-17 94.4 201 38.8
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.4e-17 94.0 163 38.7
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.4e-17 94.0 86 59.3
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.3e-17 93.2 204 37.7
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 2.3e-17 93.2 215 37.2
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 4.0e-17 92.4 212 35.4
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 6.8e-17 91.7 87 56.3
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 6.8e-17 91.7 179 41.3
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 6.8e-17 91.7 188 36.7
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 8.9e-17 91.3 89 57.3
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 2.0e-16 90.1 203 36.9
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.0e-16 90.1 170 41.8
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 4.4e-16 89.0 213 36.6
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 5.7e-16 88.6 184 37.0
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.5e-16 88.2 196 36.2
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 1.3e-15 87.4 194 39.2
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 5.4e-14 82.0 171 35.1
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 7.0e-14 81.6 84 52.4
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.0e-13 80.1 183 38.3
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 2.0e-13 80.1 183 37.7
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 2.7e-13 79.7 198 33.8
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.0e-12 77.8 158 40.5
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 1.7e-12 77.0 198 33.8
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 2.3e-12 76.6 167 38.9
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 6.6e-12 75.1 147 36.7
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 4.3e-11 72.4 82 51.2
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 2.1e-10 70.1 156 37.2
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 2.8e-10 69.7 98 44.9
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 6.8e-09 65.1 83 48.2
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 2.0e-08 63.5 149 36.2
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 4.4e-08 62.4 151 33.8
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 2.2e-07 60.1 42 64.3
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 4.9e-07 58.9 97 43.3
SEGI_40815 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 1.4e-06 57.4 81 48.1
SMO347G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 2.4e-06 56.6 83 37.3


User provided reference genes

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