Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 1.1e-78 296.6 158 100.0
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 6.2e-24 114.8 80 77.5
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 2.0e-19 99.8 77 68.8
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 4.3e-17 92.0 81 64.2
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.2e-16 90.5 82 64.6
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 1.2e-16 90.5 83 66.3
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 2.8e-16 89.4 82 57.3
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 8.1e-16 87.8 73 67.1
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 8.1e-16 87.8 73 67.1
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.1e-15 87.4 77 62.3
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 2.3e-15 86.3 76 65.8
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 2.3e-15 86.3 83 63.9
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 4.0e-15 85.5 76 61.8
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 6.8e-15 84.7 80 60.0
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 1.2e-14 84.0 67 64.2
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.5e-14 83.6 74 64.9
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 1.5e-14 83.6 72 59.7
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 2.0e-14 83.2 73 63.0
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 3.4e-14 82.4 84 58.3
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 3.4e-14 82.4 71 66.2
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 4.4e-14 82.0 77 61.0
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 5.8e-14 81.6 78 62.8
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 5.8e-14 81.6 78 62.8
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 5.8e-14 81.6 78 62.8
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 7.5e-14 81.3 80 60.0
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 7.5e-14 81.3 75 58.7
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 7.5e-14 81.3 73 64.4
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 9.8e-14 80.9 78 61.5
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 9.8e-14 80.9 78 61.5
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 9.8e-14 80.9 78 61.5
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 9.8e-14 80.9 78 62.8
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 1.7e-13 80.1 78 61.5
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 1.7e-13 80.1 87 55.2
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 2.9e-13 79.3 78 61.5
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 2.9e-13 79.3 78 61.5
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 2.9e-13 79.3 78 61.5
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 2.9e-13 79.3 69 65.2
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 60.3
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 3.7e-13 79.0 78 61.5
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 4.9e-13 78.6 69 65.2
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 4.9e-13 78.6 76 57.9
PGR004G1479 Punica granatum HOM05D005113 ORTHO05D006045 4.9e-13 78.6 89 52.8
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 4.9e-13 78.6 69 63.8
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 6.4e-13 78.2 75 64.0
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 6.4e-13 78.2 74 60.8
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 8.3e-13 77.8 79 59.5
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 8.3e-13 77.8 68 64.7
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 1.1e-12 77.4 70 60.0
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.1e-12 77.4 81 55.6
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.4e-12 77.0 84 54.8
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 1.4e-12 77.0 80 60.0
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.9e-12 76.6 80 60.0
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 3.2e-12 75.9 88 52.3
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 4.1e-12 75.5 80 60.0
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 5.4e-12 75.1 86 55.8
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 7.1e-12 74.7 72 62.5
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.2e-11 73.9 86 53.5
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 1.6e-11 73.6 71 59.2
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.6e-11 73.6 83 53.0
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 2.1e-11 73.2 86 54.7
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 3.5e-11 72.4 87 51.7
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.6e-11 72.0 86 47.7
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.0e-11 71.6 93 49.5
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.0e-11 71.6 93 49.5
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.0e-11 71.6 93 49.5
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 6.0e-11 71.6 99 49.5
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 6.0e-11 71.6 93 49.5
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 7.8e-11 71.2 94 48.9
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 1.0e-10 70.9 88 47.7
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 1.0e-10 70.9 91 49.5
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 1.3e-10 70.5 93 48.4
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.3e-10 70.5 93 48.4
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.7e-10 70.1 75 56.0
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 8.6e-10 67.8 80 52.5
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 2.5e-09 66.2 82 53.7
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 3.3e-09 65.9 82 53.7
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 3.3e-09 65.9 75 54.7
Carub.0004s1761 Capsella rubella HOM05D005113 ORTHO05D006045 7.3e-09 64.7 72 54.2
PSO384G4604 Papaver somniferum HOM05D005113 ORTHO05D006045 7.3e-09 64.7 103 46.6
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 2.8e-08 62.8 63 60.3
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 6.2e-08 61.6 81 48.1
A04p27340 Brassica napus HOM05D005113 ORTHO05D006045 8.1e-08 61.2 86 50.0
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 8.1e-08 61.2 90 45.6
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 8.1e-08 61.2 66 56.1
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 1.4e-07 60.5 94 43.6
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.8e-07 60.1 62 56.5
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.8e-07 60.1 64 59.4
BraA09t40003Z Brassica rapa HOM05D005113 ORTHO05D006045 2.3e-07 59.7 78 51.3
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 2.3e-07 59.7 83 48.2
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 3.1e-07 59.3 63 55.6
BcaB01g03875 Brassica carinata HOM05D005113 ORTHO05D006045 4.0e-07 58.9 85 50.6
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 4.0e-07 58.9 65 58.5
AT2G35850 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 8.9e-07 57.8 82 50.0
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 8.9e-07 57.8 78 51.3
C04p64840 Brassica napus HOM05D005113 ORTHO05D006045 1.2e-06 57.4 89 47.2
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 1.5e-06 57.0 63 52.4
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 1.5e-06 57.0 88 44.3
BraA04t18232Z Brassica rapa HOM05D005113 ORTHO05D006045 2.0e-06 56.6 86 47.7
CDE07G0213 Ceratophyllum demersum HOM05D005113 ORTHO05D006045 2.0e-06 56.6 78 43.6
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 2.6e-06 56.2 85 44.7
BcaB06g28884 Brassica carinata HOM05D005113 ORTHO05D006045 3.4e-06 55.8 86 46.5
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 3.4e-06 55.8 80 43.8
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 3.4e-06 55.8 74 44.6
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 5.8e-06 55.1 79 48.1
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 5.8e-06 55.1 62 50.0
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 9.9e-06 54.3 65 52.3


User provided reference genes

Program Settings