Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HPP92_013928 Vanilla planifolia HOM05D005131 ORTHO05D006645 2.7e-97 358.6 172 100.0
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 9.6e-63 243.8 132 85.6
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 9.6e-63 243.8 132 85.6
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 4.7e-62 241.5 148 78.4
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 8.1e-62 240.7 132 84.8
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 1.1e-61 240.4 134 82.1
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 1.4e-61 240.0 150 77.3
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 2.4e-61 239.2 132 83.3
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 3.1e-61 238.8 132 83.3
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 4.0e-61 238.4 132 84.8
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 5.2e-61 238.0 142 79.6
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 6.9e-61 237.7 126 87.3
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.2e-60 236.9 147 76.9
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 1.2e-60 236.9 142 78.9
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 1.5e-60 236.5 147 76.9
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 1.5e-60 236.5 132 81.8
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 2.0e-60 236.1 132 81.1
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 2.0e-60 236.1 150 76.0
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 2.6e-60 235.7 129 84.5
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 3.4e-60 235.3 134 81.3
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 4.4e-60 235.0 129 82.9
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 4.4e-60 235.0 129 82.2
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 5.8e-60 234.6 136 79.4
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.8e-60 234.6 132 82.6
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 5.8e-60 234.6 132 82.6
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 5.8e-60 234.6 150 75.3
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 5.8e-60 234.6 132 81.8
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 7.6e-60 234.2 129 82.2
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 7.6e-60 234.2 131 82.4
CsaV3_3G038080 Cucumis sativus L. HOM05D005131 ORTHO05D006645 9.9e-60 233.8 132 81.1
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 9.9e-60 233.8 132 82.6
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 1.7e-59 233.0 132 81.1
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 2.2e-59 232.6 150 74.0
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 2.2e-59 232.6 132 81.8
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 2.9e-59 232.3 132 81.8
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 2.9e-59 232.3 135 80.0
Hund10854 Selenicereus undatus HOM05D005131 ORTHO05D006645 2.9e-59 232.3 129 82.9
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 3.8e-59 231.9 132 81.8
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 3.8e-59 231.9 132 81.8
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 4.9e-59 231.5 129 82.9
ATR0697G267 Amborella trichopoda HOM05D005131 ORTHO05D006645 6.4e-59 231.1 136 78.7
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 6.4e-59 231.1 132 80.3
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 6.4e-59 231.1 132 80.3
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 8.4e-59 230.7 129 81.4
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 8.4e-59 230.7 144 75.7
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 1.1e-58 230.3 129 82.2
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 1.4e-58 229.9 129 82.2
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.9e-58 229.6 150 72.7
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 2.4e-58 229.2 153 72.5
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 2.4e-58 229.2 132 78.8
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 3.2e-58 228.8 150 72.7
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 3.2e-58 228.8 132 79.5
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 1.6e-57 226.5 132 78.8
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 1.6e-57 226.5 123 83.7
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 2.7e-57 225.7 150 72.0
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 3.5e-57 225.3 129 80.6
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 3.5e-57 225.3 129 79.8
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 4.6e-57 224.9 147 74.1
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 6.0e-57 224.6 150 72.0
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 6.0e-57 224.6 129 79.1
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 7.8e-57 224.2 132 75.8
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.7e-56 223.0 150 72.0
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 1.7e-56 223.0 127 81.1
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 2.3e-56 222.6 141 74.5
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 3.0e-56 222.2 150 72.0
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 3.0e-56 222.2 117 87.2
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 3.9e-56 221.9 136 77.2
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 3.9e-56 221.9 150 70.7
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 5.1e-56 221.5 120 84.2
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 6.6e-56 221.1 129 79.8
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 6.6e-56 221.1 132 75.8
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 1.5e-55 219.9 144 72.9
CDE09G0133 Ceratophyllum demersum HOM05D005131 ORTHO05D006645 1.9e-55 219.5 132 77.3
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 2.5e-55 219.2 117 85.5
SHI18412 Sapria himalayana HOM05D005131 ORTHO05D006645 5.6e-55 218.0 130 77.7
MELO3C009548.2 Cucumis melo HOM05D000492 ORTHO05D000499 3.6e-54 215.3 123 78.9
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 8.1e-54 214.2 135 74.8
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 8.1e-54 214.2 135 74.8
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 1.1e-53 213.8 135 76.3
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 1.8e-53 213.0 117 82.9
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 3.1e-53 212.2 135 75.6
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 6.9e-53 211.1 120 80.0
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 9.0e-53 210.7 135 74.1
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 9.0e-53 210.7 121 79.3
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 1.2e-52 210.3 138 72.5
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 2.0e-52 209.5 120 79.2
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 2.6e-52 209.1 117 81.2
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis HOM05D005131 ORTHO05D006645 3.4e-52 208.8 129 72.1
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 4.5e-52 208.4 137 72.3
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 4.5e-52 208.4 117 80.3
Hund14967 Selenicereus undatus HOM05D005131 ORTHO05D006645 2.2e-51 206.1 115 81.7
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 6.4e-51 204.5 135 73.3
SMO334G0001 Selaginella moellendorffii HOM05D005131 ORTHO05D006645 8.4e-51 204.1 122 73.8
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 1.9e-50 203.0 135 71.9
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 5.4e-50 201.4 137 73.0
Cc04_g12370 Coffea canephora HOM05D005131 ORTHO05D006645 6.7e-48 194.5 108 83.3
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 6.7e-48 194.5 148 62.8
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 2.5e-47 192.6 133 73.7
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 2.4e-45 186.0 130 71.5
MBI12_g38628_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 1.2e-44 183.7 104 81.7
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 9.9e-44 180.6 123 67.5
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 2.2e-43 179.5 121 74.4
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 3.8e-43 178.7 144 57.6
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 2.1e-38 162.9 85 87.1
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 4.8e-38 161.8 132 62.1
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 6.9e-37 157.9 85 83.5
HPP92_012178 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.2e-36 157.1 110 70.9
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 4.5e-36 155.2 151 49.0
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 3.8e-35 152.1 118 59.3
CBR_g41666 Chara braunii HOM05D005131 ORTHO05D006645 4.3e-31 138.7 142 51.4
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 9.7e-31 137.5 135 51.9
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 1.6e-30 136.7 117 60.7
Psat0s6170g0080 Pisum sativum HOM05D005131 ORTHO05D006645 1.6e-30 136.7 95 72.6
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 1.1e-29 134.0 85 76.5
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 5.3e-29 131.7 65 87.7
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 1.2e-28 130.6 87 71.3
Os07g0157900 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 6.7e-24 114.8 119 54.6
Psat3g205720 Pisum sativum HOM05D005131 ORTHO05D006645 1.7e-22 110.2 63 82.5
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 4.8e-22 108.6 118 54.2
Pp3c7_11890 Physcomitrium patens HOM05D005131 ORTHO05D006645 2.1e-17 93.2 97 49.5
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 3.6e-17 92.4 66 66.7
MD14G1041100 Malus domestica HOM05D005131 ORTHO05D006645 3.0e-16 89.4 61 72.1
Os08g0165800 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 2.6e-15 86.3 54 72.2
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 1.0e-08 64.3 151 31.8
arahy.Tifrunner.gnm1.ann1.Y0MH84 Arachis hypogaea HOM05D005131 ORTHO05D006645 1.4e-08 63.9 107 40.2


User provided reference genes

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